Hippocampus comes (tiger tail seahorse): 109516351
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Entry
109516351 CDS
T04969
Name
(RefSeq) non-POU domain-containing octamer-binding protein-like isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcq01009
]
109516351
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109516351
03041 Spliceosome [BR:
hcq03041
]
109516351
Protein phosphatases and associated proteins [BR:
hcq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109516351
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109516351
Spliceosome [BR:
hcq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109516351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RDM3_C
Amino_oxidase
Motif
Other DBs
NCBI-GeneID:
109516351
NCBI-ProteinID:
XP_019726387
UniProt:
A0A3Q2Y1U8
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MSRFHNNRGGMGMNQFQPRRGGGVGGPMRGSIMGSPNFRNHPFQNQNRRGGHNNFNRGQQ
SSNQKPQTNQGLPGLPPPTPGPALTMKGPMDKQQEPEKPTTPTKEANNQPKQEIISPQPN
QANKNTQSTVKSTTQNANGPPQQQQPQNQSPLTSPKSGAQQNQQNQKGGPQPNQQNQKGG
PQPNQQNQKGGPQPNQQKQKTGQQPNQQNQRGGQQQNQPNPRGSQPQNQRGGQHQNQQNQ
RGGQQQNQQNQRMGPHQNQRAGVQQQNQHKQKMGPQQQNQQNQRPGPKTGAHMNTFNKPD
QLQTQQEAPGTSSEQREPQQEFRAALSMLLKPGEKSYTQRCRLFIGNLPNDITEENFRKI
FAKYGEPSEVFINKGKGFGFIRLESRALAEIAKGELDDLPMKGRNLRVRFATHSAALSVK
NLSPFVSNELLEEAFSQFGMVERAIVIVDDRGRSTGKGIVEFASKPAARKALDRCNEGVF
LLTTSPRPIVVEPLEQCDDEDGLPEKLAQKNPRYQVEREEPPRFARPGTFEYEYSKRWKS
LDEMEKQQRQQVEKNMREAREKLESEMEDAYHEHQANLLRQDLLRRQEELRRMEELHSQE
MQKRKEMQLRQEEERRRREEEMLHKREMEEQMRRQREESYRMGNFIDRERDMRMSAGAAV
GMGDMSYGAVNPTFSMNVMGFEGQQVMGASPGSQMSNDMRGERFAQGGPRGMGPGNGSYN
RVREEFDLPAKKPRF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttttcataataaccgcggcggaatggggatgaatcaattccagcctcgccga
ggtggtggagtcggcggtccgatgcggggtagtataatgggaagtcccaattttagaaac
cacccttttcagaatcagaatcgccggggaggacacaataacttcaaccgaggacagcag
tcgagtaaccagaagccacagaccaaccagggcttgccaggccttccaccgccgacccca
gggcctgctctcactatgaaaggcccgatggacaagcaacaggagccagaaaagccgaca
acaccaacaaaggaggcgaacaatcagcccaaacaagaaatcatatctcctcagccgaac
caggccaacaagaacacacagtcaacagtcaagtcaacaactcaaaatgcgaatggcccg
ccacagcagcagcagccgcagaatcagtctccgcttacaagtcccaagtcaggcgctcag
caaaaccaacagaatcagaaaggaggcccgcaaccaaaccaacagaatcagaaaggaggc
ccgcaaccaaaccaacagaatcagaaaggaggcccgcaaccaaaccaacagaaacagaag
actggacagcaaccgaaccaacaaaaccagcgaggaggtcagcaacaaaatcaaccgaac
ccgaggggaagtcaaccgcagaaccagaggggaggccaacaccaaaatcagcagaaccag
aggggaggccaacaacaaaatcagcagaaccagaggatgggcccgcatcagaaccagagg
gcaggtgtgcagcagcaaaaccaacataagcagaagatgggcccgcagcagcagaaccaa
caaaatcagagaccaggtccgaagacgggggcccacatgaatacgtttaataaaccggac
caattgcaaacgcagcaagaggccccgggcacaagctcggaacaacgtgagccacagcag
gaattcagggcggcactgtccatgttgctgaaacccggcgagaaatcatacacacaacgc
tgtcgtctgtttatcggcaacctccctaatgacatcacagaggagaattttaggaagatt
tttgccaagtatggagagcccagtgaggtctttatcaacaaaggaaaaggctttggtttc
atccgactggagtcccgtgcacttgccgagatagcgaaaggagaattggacgaccttcca
atgaaaggcagaaacctccgcgtccgcttcgccacacactcagcggccctctctgtgaag
aacctgtcaccattcgtgtccaacgagctcttggaggaggccttctcccaatttggaatg
gtagagagggccatcgtcattgttgatgaccgcgggcgttccaccggcaagggcattgtt
gagtttgcctccaagcccgctgctaggaaggccctggaccggtgtaacgagggtgtcttt
ttgctcaccacgtcaccaaggcccatagttgtggagcctcttgaacagtgtgatgatgaa
gacggacttcctgagaagctggcacagaagaatcccagatatcaagtcgagcgagaggag
cccccgcgctttgcccgccctggcacctttgaatatgagtactccaaacgctggaagtca
ctggatgagatggagaagcagcagaggcagcaggtggagaagaacatgcgcgaggctcgc
gagaagctcgagagcgagatggaggacgcataccacgagcaccaggctaacctcctccgc
caagatctgctgagacggcaggaggaactgcgacgcatggaagagctgcacagtcaggag
atgcaaaagaggaaggagatgcagttgagacaagaggaggagcgtcgcaggcgagaagag
gagatgcttcacaagcgcgaaatggaggaacagatgcgtcgccagcgcgaggaaagctac
aggatgggcaactttattgatagggagcgagacatgagaatgagtgctggggctgcagtg
ggcatgggagatatgtcctatggcgccgtgaacccgaccttctccatgaatgtaatggga
tttgaggggcagcaggtaatgggagcatctccaggatcccagatgagcaacgatatgcgc
ggcgaacgcttcgctcagggcggcccccgaggaatggggcccggtaacggctcttacaac
agggtccgcgaagagtttgaccttcccgctaaaaaaccgcgtttttaa
DBGET
integrated database retrieval system
