Hippocampus comes (tiger tail seahorse): 109516395
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Entry
109516395 CDS
T04969
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109516395
03036 Chromosome and associated proteins [BR:
hcq03036
]
109516395
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109516395
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109516395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109516395
NCBI-ProteinID:
XP_019726466
UniProt:
A0A3Q2Z363
LinkDB
All DBs
Position
Unknown
AA seq
1934 aa
AA seq
DB search
MEDKKKKKDDKRIKETSQKVPEQNVKVPESTKPSCSQQPTTPTSVSPSPGPVDPSSPNSS
ATGFSAPVLPGGGNNAKQRTAVANGQPSSLSGNQTPQQQRYMSREVPPRFRCQQDHKVLL
KRGQPPLSSMLLGGGGGDESTGGVGVGSGWGAAPPLSSKEADNSNANTDTDSNLGSSSPS
PPNTASSSGVTALSLSSSSTNSTYANSTWGAGSVSLPPSQGCDKIIVDGTDLDSWPSIQG
TVKLSSDGSGGRVQQQDGPGNKNSSASFHEKNLQQIGGVAEGGAGKVYNPSPPISSPLSS
FSSQNECVQTGSVMWSSSTSPRAEAGLGSAAFYNSKVSHLLPGPQESPADSNSSLPGAIL
NPSVNPSAWPALVQGKTSTSATSLHLSSVPASTTSLPHKHTETAELDTSTEQQHPLGNFE
QELDSGEGAQGAGPGPNREDGDKRETESGAEGEGSAHRCGPLSSSSAVSSSLKPLTAVPS
APRTGASQEDHWGGHDTGIHEQDKNPGSFGNQGDNTGWGRESANIETLSQGGWKDRSSAV
DCGDTDECVSSNNLAIASATGGCGSNNNNNNSEGGGGSALPGSASPKLAMMENAWDNQKG
MESGHVVQQQGQSAGGEGQASSSGDGTKNDGEKGTGNEQKTHGAQSVLALSNQTSDAEVA
LLGMLNRSDLDPRVLSNTGWGQTQIRQNVAWDLNTTKQVGHRNEKMSSSSTFSSGTMPPN
NRSSGFISNSRLNSNDESDNVTSGPASVRDSWDGGGPQVTCGSHMSDGVLHKPKMLDKED
SPGNATRSWGDPPPDNQGKGWGDEHQWGDHRGGNWRDKGEQSSGWPVGPEDKRTGGWKGT
ERGKVGGWGDWGQGESKPGGGWGDGRFRSANSSDEVSSWGNPDESAPQRGGWGEGDVVKS
PHDWGGSQPHAAGPTPNNQVAAMKTPNQHHQSQGHHQPGRTLQGGWDSRPNVGSGGPPSK
NQNQGSGWISGPIPQISGDDSVKPSGWDEPSPQCISHKMEIDDGTSAWGDPTNYNGKNVN
LWDKNRAPSGESHSQQASALQPSRRHQGLPHRDANAGNTVVGMWGGGTQSLDNGSGAWNQ
TSDTASGWGDSDDPKMSGWGNLSPNPGKSTKSLETWGGKGDGSVAASRHPSWEEEDDSAV
GIWNSTGSQGSSSSFHSGGWSHGGRRGNMKGGSGDSWLNPISRQFSNMGPLGEDPSIEKK
MEGDKRGMADYNGDIRRGGRGGGVYRMSNAKDMGPVDMSTYGEKMGSHGMYVGSGGGIHQ
SRGIHQPGLHPLNPSPGLRAQVPHPFLSAQVPGSMLKQMPSPGGSVLGGVGGVGSVGGAG
SVGGGVFPPQISPQQLAVLSNIYPHVQQFHLACQLLLQQQQQQQQQQQFLQNQRKFPQPQ
PLRQQPDPQQLARIVAILQQQRHQHGGVAAGSSKLSPSHLGGSLSKQPMGDSYPPPGVGG
PVSDPHSKMQGVYSGLELGSPMIGGLKDIGGQQSRFKWMMEGHSPAPSPPESTLLKNGST
ENWQRTPGSKMGNKTSTSSWPPEFQPGVPWNGMQNSGDPESDPYMTPGSVLGSPGPPNLN
DSDHQLLRDNIGPNPALNTSLPSHGAWPYSASDSPLSKAHGTAKYSEYKSSWPPEPIGQS
KSWKADRNSSQLPRPPPGLTNQKQGTPSPWGSVGPRVARSWGGGGVKQDSRFGPGTAWSD
GVASRGSSWLLLRNLTPQIDGSTLKTICMQHGPLLTFHLGLTQGSALIRYSSRLEAAKAQ
GALHMCVLGNTTILAEFLSEEEVSHYFAHCQAAGADVTSTGGAASAGTLGSPGTGTVVTP
SGASSPRSEGAVASTISGGEGSGSGAESGSVGPSGVMSPGSGWQGLDGTSSCSETSSVQG
PGLGIFSQWSTNGAGGVGNVGGVESGRSGLWGGMAAGYHGSSLWGAPQMEERHQMDSPAA
LLPGDLLGSGADSV
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaagaagaaagacgacaaaaggataaaggaaacttctcaaaaggtc
ccagaacagaacgtcaaagtgccagaatcaaccaagccctcctgttcccagcaacccacc
accccaacctcagtctcccccagccctggccctgttgacccctcgtccccaaattctagt
gccactgggttctctgcaccagttcttcctggtggcgggaacaatgcaaagcagcggact
gctgtggccaacggacagccctcctccctttctggaaaccaaactccccagcagcagcga
tacatgtctagagaggttccaccaagatttcgctgccaacaggaccacaaagtgctactg
aagagggggcagcctccactgtcctccatgctactcgggggaggtgggggagatgagagc
actggtggggttggggtaggcagtggctggggtgccgcgccacccctttcctcaaaagaa
gcagataactccaatgcaaatacagacacagattcaaacttgggttcatcctctccttca
ccacccaacacagcatcctcatcaggtgttactgctctgtcgttatcctcatcttctacc
aattcaacttatgcaaattccacatggggggcaggatctgtcagcctgcccccctctcag
ggttgtgacaagatcattgtggacgggactgatctggacagctggcctagcatccaaggc
acagtcaaattaagttctgatggatctggaggaagagtgcagcagcaagacggccctggt
aacaaaaacagtagtgcctcatttcatgagaagaacctccagcagataggcggagtagct
gaaggaggtgcagggaaagtgtacaatccctcccctcctatttcttctcctctttcctca
ttttcatcacaaaatgaatgtgttcagacaggcagcgtcatgtggagctcatccacttcc
cctcgggcggaagcaggattgggatcagcagcattttataattccaaagtctcccatctg
cttcctggacctcaagagagtcccgcagatagcaacagcagtctccccggtgccatttta
aaccccagtgtgaacccctccgcctggccagccctcgtgcaggggaagacatcgacttca
gccacttcgctacatttgtcttcagttcctgccagcaccacctctctccctcacaagcac
acggagacagcagaattagacacaagtacagaacaacagcatcccttgggaaactttgag
caagagctggattcaggtgaaggagcacagggagctggaccaggaccaaatcgagaagat
ggtgacaagagagaaactgagtctggtgctgaaggagaagggagtgcgcatcgatgtggt
cctttgtcttcctcttctgctgtctcttcctctttgaaacctttgactgcagtgccctct
gctccaagaacaggtgcttcacaggaagatcattggggcggacatgacactgggatccat
gaacaggataaaaatccggggagctttgggaaccagggtgacaatacagggtggggaagg
gaaagcgcaaatatcgaaacgctatctcagggagggtggaaagacaggagctcagcagtg
gactgtggagacacagacgaatgtgtaagttcaaataacttagcaatagcaagtgcaaca
gggggttgtgggagcaacaacaacaacaacaacagtgaaggcggcggtggaagtgctttg
ccaggatctgcgtcaccaaagttagcaatgatggaaaatgcttgggacaatcaaaaaggg
atggaaagtgggcacgtggtccaacagcaaggacaaagcgctggtggtgaaggacaagcc
tcctctagtggagatggaacaaaaaatgatggcgaaaaagggactggtaatgagcagaag
acacatggagcccagtctgtgctcgccctttccaaccagacctccgatgctgaagtggcc
ttactaggcatgctcaatcgatctgacctggatcccagggttttgtccaacacgggttgg
ggccagacccaaattcgtcagaatgtggcctgggatctgaacaccactaaacaagtaggg
catcgaaatgaaaaaatgtcctcatcttccacattctcatcgggaacaatgccccccaac
aatcgcagttctgggttcatctccaattccaggctaaatagtaatgatgagtctgacaat
gtgacctctggccctgcttcagtgagggactcttgggatggcggtggtccacaggttact
tgtggttctcacatgtccgatggcgttctacacaagcccaaaatgctggacaaggaggac
agtccaggaaatgcaactcgaagttggggcgatcctccacctgacaaccagggcaaaggg
tggggtgacgaacaccagtggggggaccacagaggtgggaattggagagacaaaggagag
cagagcagcgggtggcctgttggcccagaagacaaaaggacaggggggtggaagggaact
gaaagaggaaaggtaggtggttggggagactggggccagggtgagtccaaacctggaggt
gggtggggagatggacgattccgaagtgcaaacagctcggatgaagtatcctcttggggt
aacccggatgaaagtgcacctcagcggggaggatggggagagggagatgtggttaagtct
ccccacgactgggggggttcccagccccacgcagcaggtccgacaccaaacaaccaagtg
gccgcaatgaaaaccccaaatcagcatcaccaatcacagggacatcaccaaccaggaaga
actctacaaggaggttgggacagccggccgaatgttggaagtgggggtccgccatccaag
aatcagaaccaaggttcgggctggatatctggccccattcctcaaatctctggggatgac
tctgtgaaaccgagtggctgggatgagccctctcctcagtgcatcagtcacaaaatggaa
attgatgacggaacttcagcctggggagatcctaccaactacaatggcaaaaatgtgaac
ttgtgggacaaaaatagagccccatctggcgaaagccacagtcagcaggcttccgcactg
cagccatctcgacgacatcagggcttgccacacagggacgctaacgccggaaatacagtt
gttggtatgtggggagggggcacacagtctcttgacaatgggtcaggtgcttggaaccag
acatcggatacagcatcgggatggggtgactcagacgatcctaaaatgtctggctgggga
aacctctcacccaaccctggtaaaagtaccaagtcactggagacctggggtgggaaggga
gatggctcagtcgcagcctcccgtcatcctagctgggaagaggaagatgacagcgcggta
gggatctggaacagcactggctcccaaggaagtagttcctcctttcactcaggaggctgg
agtcatggtggaaggcgaggcaacatgaagggtgggagtggagacagctggctgaatcca
atctcacgacagttttcaaacatgggtcctctgggtgaagaccccagcatagagaagaag
atggaaggagacaagagagggatggctgactacaatggcgacattcggagaggaggaaga
ggtggaggagtttaccgcatgtctaatgccaaagacatgggccctgttgacatgagcacc
tatggtgaaaaaatgggtagccacggaatgtatgttggaagtggtggagggatccatcag
tcccgagggatacaccaacctggcttgcatcctctgaacccctctccagggcttcgagct
caagtgccgcatccgttcctgtctgctcaggtgccgggttctatgttgaagcagatgccg
tctcctggtggcagtgtgcttggaggagtaggaggtgtcggttctgttggtggagctggg
agtgttggtggaggagtgttccctcctcagatttccccacaacaattagctgtgcttagc
aacatctacccccacgtgcagcaattccatctggcttgtcagctcttgctacaacagcag
cagcagcaacaacagcagcagcagtttctgcaaaaccaacgaaagttccctcagccacag
ccactcagacagcagccagatccacagcagctggcaaggattgttgcaattctccagcaa
caacgacatcaacatggtggagtagcagccgggagctcaaaattatccccctctcacctt
ggaggaagtctgtcgaaacagcccatgggtgactcgtatccacctcctggagtgggaggc
cccgtgtcagacccgcattccaaaatgcaaggggtgtactccggattggaacttggcagt
cccatgatcggggggttgaaggacatcggaggacagcagtcacgcttcaaatggatgatg
gagggacattccccagctccatctccccctgagtcaacacttctcaagaatggctccaca
gaaaactggcagcgtacgcctgggagcaaaatggggaacaagacttccacatccagttgg
ccaccagagttccagcctggtgtcccctggaatgggatgcagaatagtggagaccctgaa
tctgacccctatatgacccccggtagtgttcttggctccccgggacccccaaacctcaat
gattctgaccatcagttattgcgagacaacatagggccaaatcctgccctcaacacctca
ctgccttcacatggtgcctggccctacagtgcctcagacagcccactcagcaaagcacac
ggtacagcaaagtactcagaatataagtccagttggccccctgagcccatcggacaaagt
aagtcgtggaaggccgatcgcaacagctcacagctgccacgcccccctcctggcttaacc
aatcagaagcagggcacaccctctccttggggaagtgtcggcccacgggtagcccggagc
tggggtgggggtggtgttaaacaagactcgagatttgggccaggcacagcttggagtgat
ggtgtggcttcgagaggcagttcctggttgctgttgagaaacctgacaccacaaattgat
ggctccacacttaagacgatatgcatgcagcatggtccccttttgacctttcaccttggc
cttacccagggcagcgcgctgattcgctacagcagccgtcttgaggcagccaaggcccag
ggtgcactgcacatgtgtgtactggggaacaccacaatcctggcagagttcctgagcgag
gaggaagtttcccactattttgcacattgccaggctgcaggcgctgatgtgacgagcaca
ggaggggctgcatctgctggtacgcttggttcacctggaactggcaccgtagtgacccca
agtggggctagctctccaagaagtgagggggctgtagcgagcaccatctcaggtggagag
gggagtggcagtggagcggaaagtggttccgtaggtccgagtggtgtcatgtccccgggt
tctggttggcaaggtctagatggtacaagtagctgttcagaaacctcctcagtccaaggg
cccggtttggggattttttcccagtggagcaccaatggagcaggaggggtgggaaatgtc
ggtggagtagaatctgggaggtccggactttgggggggcatggctgcaggataccatggc
agcagtctgtggggggcaccgcaaatggaggagaggcaccaaatggacagtcctgctgcg
ttgttgcctggtgatttgctgggcagtggagctgattcagtctga
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integrated database retrieval system
