Hippocampus comes (tiger tail seahorse): 109516575
Help
Entry
109516575 CDS
T04969
Symbol
nfkb1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04010
MAPK signaling pathway
hcq04210
Apoptosis
hcq04218
Cellular senescence
hcq04620
Toll-like receptor signaling pathway
hcq04621
NOD-like receptor signaling pathway
hcq04622
RIG-I-like receptor signaling pathway
hcq04623
Cytosolic DNA-sensing pathway
hcq04625
C-type lectin receptor signaling pathway
hcq04920
Adipocytokine signaling pathway
hcq05132
Salmonella infection
hcq05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109516575 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109516575 (nfkb1)
04218 Cellular senescence
109516575 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109516575 (nfkb1)
04621 NOD-like receptor signaling pathway
109516575 (nfkb1)
04622 RIG-I-like receptor signaling pathway
109516575 (nfkb1)
04623 Cytosolic DNA-sensing pathway
109516575 (nfkb1)
04625 C-type lectin receptor signaling pathway
109516575 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
109516575 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109516575 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
109516575 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109516575 (nfkb1)
Transcription factors [BR:
hcq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109516575 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
109516575
NCBI-ProteinID:
XP_019726813
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MAGDEHFLPVGSQILDTLMMDPSWDIPQFPVLQSHPASTRMGDGPFLHILEQPKQRGFRF
RYGCEGPSHGGLPGATSEKNKKTYPAVTICHYQGPARVVVQLVTALTPLPRLHAHSLVGS
GTYAFVMXVFRFPNLGIQHVTKKNVAKTLEERMCEAVRMGYNFGVSIHPDVDTQCAEARV
PRQLSEQQRGAICGAACVQAKEMDLSVVRLMFTAFLPDSDGAFTRPLHPVLSHPIYDSKA
PNASNLKIVRMDRTAGCVSGGEEVYLLCDKVQKDDIQVRFFEEDDSGLTWEALGDFSPTD
VHRQFAIVFKTPKYRDQNLQKPTPVMVQLKRKSDSETSEPKPFTYHPQIIDKEEVQRKRQ
KTLPNFQDFSGLGGGGGGGGGSLYRGGPGPGGGPGSAAGGKTHHAGLEPLSHVSLPAGYF
QGLSAFSYGRGAGGGACPTGYATSLEGGGVKDENSPGNSAHDNDTDKDPDDGSAACAVMR
PPQQQQLQQDVDDDEATSEHASAIFLYAATGDAAYLLAPQHPLMAAQDDDGDTGLHLAVL
HGQQGALDSLTRVLAGLPPGDRLLNMRNHLYQTPLHLAVTTQQPAAAQALLAAGADPTLS
DRHGDAPLHLAARQGGSMLRLLLRQHAVRRSVDDCNTAGLCAIHLAVASNQLRSLRELLE
GGADVEAQERGSGKTALHLATEADNVSLAGCLLLEGNAKVDCCTYDGTTPLHVAAGRGSV
KLTALLMAAGADPHKENLEPLFYKDEDDDDEDDDEGCVPGTSPINMAASEQVLELLSGHE
YHPKCPSVALPPQGDLQSLATSVKTTLSGAVANDACWENLADALGLGILKTAFRLSSDPA
KTLIDSYEVSGGTVRELGAALKSVGSCRALSILEEALCDQKTGGDGSDSDGVVCAQLEDL
KVDVGRQDGRLDSGVCDSGVELSMA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagacgagcacttccttcctgtcggcagtcagatcctggacacgctgatgatg
gatccctcgtgggacattccacaattccctgtgctgcagtcgcacccggcgtccaccagg
atgggggatggccccttcctccacatcctggagcagccaaaacagagaggcttccgcttc
cgttatggctgcgagggtccgtctcacggcggcctgcctggagccaccagcgagaagaac
aagaaaacgtatcctgccgtcacgatttgtcactaccagggtccggcccgcgtggtggtc
cagctggtgacggcgctgacgcctctcccccgactgcacgcgcacagtctggtgggcagt
ggtacatatgcatttgttatgnntgtgttcagattccccaacttgggcatccagcacgtg
acaaagaaaaatgtggccaagacattggaggagcgcatgtgcgaggctgtccgcatgggc
tacaactttggggtctccatccacccagatgtcgacacccaatgcgccgaagcccgcgtg
ccccgacagctctccgagcagcagcgcggcgcgatctgcggcgcggcatgtgtgcaggcc
aaagagatggacctgagcgtggtgcgcctcatgttcactgccttcctccccgacagcgac
ggcgccttcacccggccgctgcaccccgtcctctcgcaccccatctacgacagcaaggct
cccaacgcatcaaacttgaagatagttcgcatggaccgtacggcaggttgcgtgagcggt
ggagaggaggtctaccttctgtgtgacaaagtccagaaagacgacatccaggtgcgcttt
ttcgaggaagacgactcaggtctcacctgggaagctctgggagatttctcccccacggac
gtgcacagacagtttgccatcgtgttcaagacgcccaagtatcgtgaccagaacctgcag
aagcccacgccggttatggtgcagctcaagagaaagtcggatagcgagaccagcgagccc
aagcccttcacgtaccacccgcagatcatcgacaaagaggaggtgcagaggaagcgtcag
aagacgttacccaacttccaggacttcagcggccttggcggcggcggcggaggaggcggc
ggcagtctgtatcgaggaggcccgggaccaggaggagggccaggctccgccgcaggcggt
aaaacccaccacgccggtcttgagcccctctcgcatgtgtcattgccagcaggttacttt
cagggtttgtccgcattcagttacgggagaggagctggaggcggagcttgtcccaccggc
tacgcaacaagtctcgaaggaggtggagtcaaagatgagaattctcctggcaactcggca
catgacaatgacaccgacaaagatcccgatgacggctcggcagcctgcgctgtgatgcgc
ccaccgcagcaacagcaactgcagcaagatgtcgatgacgacgaggcgaccagcgagcac
gcgtcggccatcttcctgtacgccgccactggcgacgcggcttacctgctggcccctcag
catcccctgatggcggcgcaggacgacgacggagacacgggactccacctggctgtcctg
catggccagcagggggcactggacagtctaacccgggtgcttgcagggcttccgccggga
gaccgacttctcaacatgaggaaccatctctaccagacccctctccacctggcggtgacg
acgcagcagccggcggcggcgcaggcgctgctggcggccggggccgaccccacgctgagt
gatcgccacggcgacgcgccactgcacttggccgcgcggcaggggggttccatgctgcgc
ttgctgttgcgtcagcacgccgtcagacgaagcgtcgacgactgcaacaccgccggtttg
tgcgccatccacttggccgtggcgtccaatcagctgcggtcgctgcgggagctcctggag
ggcggggccgacgtggaggctcaggagcggggcagcggaaagaccgccctccacctcgcc
accgaggctgacaacgtatcgctcgccggctgcctgctgctcgagggcaatgcaaaggtg
gactgctgcacctacgacggcaccacgcccctgcacgtggctgccgggcgaggctccgtc
aagctaacggcgctactcatggcagcgggcgcagaccctcacaaggagaacctcgagccg
ctcttctacaaggatgaagatgatgatgacgaagatgatgatgagggctgcgttcccggg
accagccccatcaacatggccgcctccgagcaggtgttggagcttctcagtggtcatgag
taccatcccaaatgtcccagtgtggctctcccacctcagggcgaccttcagagcctggca
acctcggtgaagacgacgctcagcggcgctgtggcgaacgacgcgtgctgggaaaacctg
gctgatgctctcggtctgggaatcctcaagaccgcgttcagactgagctcggaccccgcc
aagacgctcatagactcctatgaggtgtctggcggtacggtgcgagagcttggagctgct
ctcaaatcagttggctcatgcagagcgctgagcatcctggaggaggcgctgtgcgaccag
aagacgggcggcgatggcagcgacagtgacggcgtggtgtgcgctcagctggaggacctc
aaggtggacgtcggacgacaggacgggcgtttggacagtggcgtgtgcgacagtggggtg
gagctttccatggcgtga
DBGET
integrated database retrieval system
