Hippocampus comes (tiger tail seahorse): 109516774
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Entry
109516774 CDS
T04969
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq00100
Steroid biosynthesis
hcq01100
Metabolic pathways
Module
hcq_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109516774 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hcq01006
]
109516774 (fdft1)
Enzymes [BR:
hcq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
109516774 (fdft1)
Prenyltransferases [BR:
hcq01006
]
Terpene biosynthesis
Squalene/phytoene synthase
109516774 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Octopine_DH
TM1266-like
Motif
Other DBs
NCBI-GeneID:
109516774
NCBI-ProteinID:
XP_019727114
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MAAGACCKCPISLAVFKRSLSVAPRGPTPACTRSLLSGRRLGERGLREAARASSALRAAG
FGRHAALCCLSCQESMSQSLRTCYMYLNQTSRSFAAVIQALDGDLRHAVCIFYLVLRALD
TVEDDMSIPLDRKVPMLNDFHTYLYQDTWSFSESQEKDRQVLEDFPTISLEFRNLAEEYR
EVISDICHRMGVGMAEFLEKKVGSMKEWDKYCHYVAGLVGIGLSRLFSASQLEEPEVGWD
TDLANSMGLFLQKTNIIRDYLEDTKEGRAFWPQEAWSQFAGRLEDLAQPEKLESALSCLN
LLVTDALRHVPDVIAYLARLRNQSVFNFCAIPQVMAIATLSSCYNNPLVFQGVVKIRKGQ
AVTLMMEATNMRAVQNIISQYSQEILHKVSLSDPSRDETLRILALIREKSQASDVPVRSQ
HLSPVYLSAAMLLAAVSWQYLSAAATQAQGAGDMQGQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggggcgtgctgcaagtgtcccatttcgctggccgtattcaagcgctctcta
tcggtcgcgccgcggggtccgacgcccgcctgtacccgctctctgctgtcgggccggagg
ctgggcgagcggggcctgcgggaggccgcccgggcgtccagcgctctgagagcggcaggc
ttcggtcgtcacgcggccttgtgttgtctgtcgtgccaggagtccatgagccagagcctg
aggacgtgttacatgtacctgaaccagaccagcaggagcttcgctgcagtcattcaggcc
ctggacggcgacctaagacacgccgtgtgcattttctacctggtgttacgggcattggac
acggtggaggacgacatgagcatccccctggacaggaaggttcccatgctgaatgacttc
cacacctacctgtaccaggacacctggagcttcagcgagagccaggagaaagaccgacaa
gttctggaggacttccccacgatatctttggagttccgaaacctggctgaagagtaccgg
gaagtcatctcagacatctgccaccggatgggagtcggaatggccgaattcctagagaag
aaagtgggatccatgaaagagtgggacaagtattgccactatgtggcagggctggtgggc
ataggcctctctcgcctcttctcggcgtcccagctggaggagccggaggtgggctgggac
acggacttggccaactccatgggcctgttcctccagaaaacaaacatcatccgagactat
ctggaggacacaaaggagggacgtgccttctggccacaagaggcgtggagccagtttgcg
ggtcgtctggaggacttggcacagcctgagaagctggagtcggcattgtcgtgtctcaac
ctgctggtcacggatgcgctgcgccatgtgccggacgtcatcgcctacctggcccgcctg
cgcaaccagagtgtgttcaacttttgcgctatccctcaggtgatggcgatagctactctg
tcatcgtgctacaacaaccccctggtgttccagggcgtggtgaaaatccgaaagggacag
gctgtcactctcatgatggaggccaccaacatgcgagccgtgcagaacatcatcagccag
tacagccaggagattctgcacaaggtctcgctttctgacccgtcacgggacgaaacgcta
cggatcttggcgctcattcgggaaaaatctcaggcgtcggacgtgcccgtcaggagccaa
cacctgtcgcccgtgtacctgtcggccgccatgctgctggcggctgtcagctggcagtac
ctgagcgccgcggcgacgcaggcgcagggtgccggcgatatgcagggacagtaa
DBGET
integrated database retrieval system
