Hippocampus comes (tiger tail seahorse): 109516863
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Entry
109516863 CDS
T04969
Symbol
tnn
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04510
Focal adhesion
hcq04512
ECM-receptor interaction
hcq04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109516863 (tnn)
04518 Integrin signaling
109516863 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109516863 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hcq00536
]
109516863 (tnn)
Glycosaminoglycan binding proteins [BR:
hcq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109516863 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
Fn3_Dep-1_3rd
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF_2
EGF_Tenascin
DUF7949
Motif
Other DBs
NCBI-GeneID:
109516863
NCBI-ProteinID:
XP_019727211
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MATKPQWRALMAFLCTMSHCSFATKLDSSVPEQELTFSHVFNVDVPGASGCKLERLPNQD
ENGLQMESTKMGENDIIFKHNIRLQSPKCDCGESETFKSLLYRVNGLEEEVNYLKSQCAQ
GCCGNGRAAGVDTSCSGHGTYQQDTCSCLCYTGWEGPDCSLSSCPDECNDNGRCVDRKCI
CHQGYTGDDCSVLMCPNDCNDKGRCVDGKCVCFPHFTGDDCSVQKCRNDCNRNGLCFDGQ
CVCDQGFRGEDCSLVLSPQGLRLVQSTDVSLLVQWLPVSGADYYVLTYHPRGQGSALKQV
RVPKMDNSYLITGLTSGLSYFVEVRAVIRGIQSGAEEIEATTGVSAINDIQVLDRTDVSI
QVDWSNPQAEVDHFRLTHTDPSGQEAELNVQRSQEARTKHTIVGLFPGTEYLIAVQAVKG
PMEGNSSSVTGSTDIDAPTNLIATQVTEDTATVSWDPVQAQIEGYMLTYTSDGGSSGEIP
LGRDMTSYRLVGLTPGAVYTIDIWAFRGDKVSRKSFTMVETEMDAPTNLVAREETESSLR
VSWESVQAEIDGYKLTYRSPDGSSEEIPIGPDSTSYTINGLRPGVVYTVHIWAVRGNKAS
RKVSSQAETELDGPANIFAHDETESSFRVSWEGAQAEIDGYVLMYLSPDGQSEEIPLGPH
SSTYTIRGLKPGVTYTVRIWAVKGNQASRKVSTQAATELDGPANIFAHDETESSFRVSWE
GAQAEIDGYVLMYLSPDGQSEEIPLGPHSSTYTINGLKPGVTYTVRIWAVKGNQASRKVS
PQAATELDAPANLLSHDETESSFRVSWDGVQAEIDGYVLTYAYSEGSSGEISLGPDINSY
SLTGLRPGVVYTVYIWAIKGSKASRKISTQAETELDDPANPLARDQTDTGFRVSWDGVQA
EIDGYVLTYSSSEGSSGEIRVDPRSDSHSLSGLRPGVVYTVYIWAVKGDRSSRKISVQAE
TDIDAPKDLQALDVTTESARLTWAAPLADIEGYILTYRDEDGNLEAVEKQLGARESSFIV
SSLQIAKRYIVSIIAYRGSKRSQVVETIFKTDGLSYPFPVDCLQIMKNGIKKSGVYTVYI
NNDSSKPIDAYCDMDTDGGGWLVLQRRTTGKLDFMKRWRTYIAGFGNMTDEFWIGLDKIY
QMTNTPIQYEVRFDLGLGSERAYAIYDNFKIANARQKFALTIGHYRGTAGDAMTYHQGRP
WTTIDSDNDIALGNCALTHRGAWWYKNCHLANLNGKWGDNRHSMGVNWEPWKGHLVSLDF
TEMKIRPAGAYSSRKRRSLMAREKSQRNAVHHQEKKSSGQ
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggccactaaaccccaatggagggccctgatggccttcctgtgcaccatgtcgcactgc
agctttgcgaccaaattggattcctcagtccctgagcaagagcttaccttcagccacgtc
tttaacgttgacgttccgggggcgtccggttgcaaactggagcgtctgccaaaccaggat
gaaaacggtctgcagatggagagcacaaagatgggagagaacgacatcatcttcaagcac
aacatcaggttgcagtcgcccaaatgcgactgcggggagtcggagacatttaagtcgctc
ctgtacagagtcaatggcttggaagaggaagtcaactacctgaagagccagtgtgctcag
ggatgctgcggcaacggacgtgcggcaggtgtggacacaagctgcagcggccacggaacc
taccagcaggacacatgcagctgcctgtgttacacaggatgggaaggcccagactgctcc
ttatcctcctgcccggacgagtgcaacgacaacgggcgctgcgtggatcgcaagtgcatc
tgccatcagggctacacgggagacgattgcagcgtgctgatgtgccccaacgactgcaac
gacaagggccgctgtgtggatgggaaatgcgtgtgcttcccgcacttcaccggcgacgac
tgcagtgtccagaagtgtcgcaatgactgtaatcggaatggcctttgcttcgatggccag
tgcgtctgtgaccagggctttcgcggggaggactgctcattagtgcttagtcctcaaggc
ctaaggttggtccagtcaactgacgtctccctcctggtccagtggttgccagtttccgga
gctgactattatgttttaacgtatcatccccgaggtcaggggagtgccttgaagcaggtt
cgggttcccaaaatggataactcctatctcatcacaggcctgacttctgggcttagctac
tttgttgaagtccgcgctgtgatcagaggcatccaaagtggagcagaggaaattgaagct
accacaggtgtctcagcaatcaacgatatccaagttcttgaccggacagacgtctcaatc
caggtggactggagcaacccacaagccgaggtggatcacttcaggctcacgcataccgac
ccatcaggacaggaggcggagctgaatgtacaaagaagccaagaggcgcgaaccaaacac
accatcgtgggtctgtttccgggaacagaatacttgattgcagtgcaggccgttaaagga
ccgatggaggggaactcttcctcggtcacaggttccacagacattgacgcgccaacaaac
ctgatcgccactcaggtaacagaagataccgcaacagtttcttgggacccggtccaggcc
cagatcgaaggctatatgttgacgtacacctcggatgggggctccagcggcgagatccct
cttggacgtgacatgacttcataccggctggttggcctgacacctggcgcggtctacacg
attgacatctgggccttcaggggtgataaagtcagcaggaagagtttcacgatggtcgag
acagagatggatgctcccactaacctcgtggcccgggaagaaacagagagcagcctcaga
gtgtcatgggagagtgtccaggcagaaatcgacggctacaagctaacgtaccgttctcct
gatggctcaagcgaggaaatcccaattggacctgacagcacttcttacacaataaatggc
ctgaggcccggggtcgtctatacagtccacatctgggctgtcaggggaaacaaagccagc
agaaaggtctcatcgcaagcagagacagaactggatggtcctgccaacatctttgcccat
gatgagaccgagagcagcttcagagtgtcatgggagggcgcccaggcagaaattgatggc
tacgtgctaatgtacctttctcctgatggccagagcgaggaaatcccgcttgggccccat
agtagcacctacacaatacgtggcttgaagcctggagtcacctatacagtccgcatttgg
gccgtcaagggaaatcaagccagccgaaaggtctcaactcaagcagcgacagaactggat
ggtcctgccaacatcttcgcccatgatgagaccgagagcagcttcagagtgtcatgggag
ggcgcccaggcggaaattgatggctacgtactaatgtacctttctcctgatggccagagc
gaggaaatcccgcttgggccccatagtagcacctacacaataaatggcttgaagcctgga
gtcacttatacagtccgcatttgggccgtcaagggaaatcaagccagccgaaaggtctct
ccacaagcagcgacagaactggatgctcccgctaacctcttatcccatgatgagaccgag
agcagcttcagggtgtcgtgggatggtgtccaggcggaaatcgatggctacgtcctcacg
tacgcctactcggagggctctagtggggaaatctctttgggaccagacatcaattcctac
agcctgacgggcttgaggcccggtgtggtgtacactgtctacatctgggccatcaaagga
agcaaagccagcaggaagatctcgacacaagccgagacagagctggatgatcctgctaac
cctttagcccgagaccaaaccgacaccggctttagggtgtcctgggatggcgtccaagca
gaaatcgatggctacgtcctcacctacagctcttcagagggctccagtggggaaatccgt
gttgatcccaggagtgattctcacagtctgagtggtttgaggcccggtgtcgtctacact
gtctacatctgggccgtcaaaggagacagaagcagcaggaagatctcagtgcaagcagag
acagacattgacgctccaaaggacttgcaggctttggatgtcaccacggagtcagctcgg
ttgacctgggccgctcctttggctgacattgagggctacatcttaacctacagagatgag
gatggcaacctggaagctgttgagaagcagcttggagccagagagagcagctttatcgtc
tccagcctccagattgcgaaaagatacatagttagcatcatcgcctatagaggaagcaag
aggagtcaagtggtggaaaccatcttcaaaacagatggcctctcataccccttccccgtg
gattgtcttcagatcatgaaaaatggcatcaaaaagagcggcgtctacaccgtctatatc
aacaatgacagctccaaaccaattgacgcatactgcgacatggatactgatggaggcggc
tggctggtcctgcagcgtcgcaccactggcaaactggactttatgaaacgctggaggacg
tacattgccggtttcggcaacatgacagacgagttttggatagggttggataagatatac
cagatgaccaacacgcccatccagtatgaggtgaggttcgatttaggcctgggctcagag
agggcctacgccatctacgacaacttcaagatcgccaatgccaggcagaagtttgcgctc
accattggccactacagagggacagcaggtgatgcaatgacctatcaccaaggtcggccc
tggacgacgatcgactccgataatgacatcgccctcggcaactgcgccctcacacaccgc
ggggcttggtggtacaaaaactgtcatctggccaacctcaacggcaaatggggagacaac
aggcacagtatgggggtcaactgggagccgtggaaaggccacctggtgtccctggacttc
accgagatgaagattcggccggcgggagcgtactccagcaggaagaggcgatcgttgatg
gccagagagaagagccaacggaatgccgtccatcaccaggagaagaagagcagtggccaa
tga
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