Hippocampus comes (tiger tail seahorse): 109517002
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Entry
109517002 CDS
T04969
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-1-like
KO
K05719
integrin beta 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03271
Virion - Rotavirus
hcq04145
Phagocytosis
hcq04510
Focal adhesion
hcq04512
ECM-receptor interaction
hcq04514
Cell adhesion molecule (CAM) interaction
hcq04517
IgSF CAM signaling
hcq04518
Integrin signaling
hcq04530
Tight junction
hcq04810
Regulation of actin cytoskeleton
hcq04820
Cytoskeleton in muscle cells
hcq05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
109517002
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109517002
04514 Cell adhesion molecule (CAM) interaction
109517002
04517 IgSF CAM signaling
109517002
04518 Integrin signaling
109517002
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109517002
09144 Cellular community - eukaryotes
04510 Focal adhesion
109517002
04530 Tight junction
109517002
09142 Cell motility
04820 Cytoskeleton in muscle cells
109517002
04810 Regulation of actin cytoskeleton
109517002
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109517002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109517002
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcq04147
]
109517002
04515 Cell adhesion molecules [BR:
hcq04515
]
109517002
04090 CD molecules [BR:
hcq04090
]
109517002
Membrane trafficking [BR:
hcq04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
109517002
Exosome [BR:
hcq04147
]
Exosomal proteins
Proteins found in most exosomes
109517002
Cell adhesion molecules [BR:
hcq04515
]
Integrins
Integrin beta subunits
109517002
CD molecules [BR:
hcq04090
]
Proteins
109517002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
EGF_integrin
vWA_SIBA-E
DUF2975
Motif
Other DBs
NCBI-GeneID:
109517002
NCBI-ProteinID:
XP_019727430
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MARHGYCNLQHSEMDLKLLLISTLVGVFCNAQKEGNECISANARYCGECIQAGAKCGWCT
DPDFLKQGETVSTRCDELQSLTNRGCRERLIENPRGEKRILRNKMVTNRRKGAEKLKPEE
ITQIQPQKLSLTLRSGEPQSFNLKFKRAEDYPLDLYYLMDLSYSMKDDLENVKNLGTSLM
LEMSKITSDFRIGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSDGK
RFNTLVGQQHISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKL
GGIVLPNDGKCHLENNSYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYQELKN
LIPKSAVGTLSANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIAYTSRCKNGVITEGE
NGRKCSNISIGDEVTFTISVTSQGCPKQGKPETIKIKPLGFTEEVEITLSFICECECHKE
GVANSDDCHFGNGTYECGACKCYEGRVGKRCECSSNDVATEDMDRTRPQDNYEALXSETI
LSIVPSYFVVCFFFFLFSLGHGRCECRVCICDNMWTGSACECSLDTSTCLASNKQICNGR
GTCECGTCKCTDPKFQGPTCETCPTCPGVCTEHKECVQCRAFGTGEMKETCERDCSYFNL
IKVKDRDKLPQPNDASYPVMHCKERDANDCWFYYTYAVNNNTEKEVHVVETLDCPAGPEI
IPIVAGVVTGIVLIGLALLLIWKLLTIIHDRREFAKFEKEKMNAKWDTQDNPIYKSPINQ
FQNPNYGRRAAVL
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcatggatactgtaatttacaacattctgagatggacctgaaactgcttttg
atatctacattggttggagtcttctgcaacgctcagaaagaggggaatgagtgcatcagt
gcaaatgccagatactgcggggagtgcatccaggctggagcgaaatgtggctggtgtaca
gacccggacttcctaaaacaaggtgagaccgtgtctacccgatgtgatgagctgcagtct
ctcacaaacagagggtgtagagagaggttgatagagaaccctcgtggagaaaagaggatc
ctcaggaacaaaatggtaaccaatcgcaggaagggagcggagaaactaaagccagaagaa
atcactcaaatccaaccccagaagctcagtctcaccctcagatcaggggagcctcagtct
ttcaacctgaaattcaagcgggcagaagattatcccctcgacttgtactacttgatggac
ctttcttactccatgaaagacgatctggagaacgtcaagaacctgggaaccagtttaatg
ctagaaatgtcaaagatcacatctgacttcaggataggctttggctcttttgtggagaag
acagttatgccgtacatcagcaccaccccagccaaattgttgaacccctgcaccggcgac
cagaactgcaccagcccatttagctacaagaacgtccttaagctcaccagtgatggcaaa
aggttcaacaccctggtgggccagcagcacatttctggaaacctggactctcccgagggt
ggctttgatgccatcatgcaagtggctgtgtgtggggagcagattggttggaggaacgtg
actcgccttctggtgttttccactgacgctggcttccactttgcaggagatggcaagcta
ggtggcatcgttctgcctaatgatggaaaatgtcacttggagaacaattcgtacaccatg
agccactactatgactatccctcgatcgctcacttggttcagaagctgagtgacaacaac
atacaaaccatatttgctgtcacagaggagtttcagcctgtctatcaagagctgaaaaat
ctaataccaaagtctgcggtgggcaccctgtctgctaactcaagcaacgttatcaacctc
attatagatgcttacaattcgctctcatctgaggtcattttggagaacagcaagcttccg
gagggagtgaccattgcttacacatcccgctgtaagaatggagtcattactgagggtgaa
aatggacgcaaatgctccaatatttcaattggagatgaggttacatttaccatcagtgtg
acatctcaaggttgtccaaagcaaggaaagcctgagacaatcaagataaagcctctggga
ttcacagaggaggtcgagatcaccctcagctttatctgtgagtgtgaatgccataaagag
ggtgtcgccaacagcgatgactgtcactttgggaatgggacctacgaatgtggagcctgc
aagtgttatgagggacgcgtcggcaaacggtgtgaatgcagcagcaacgacgtggctaca
gaggacatggaccgcacccgcccccaagataattatgaggctcttnattctgagaccata
ttaagtatcgtcccctcttattttgttgtttgtttttttttttttcttttttccttaggg
cacgggcgttgtgagtgcagagtgtgcatctgtgacaacatgtggactgggagcgcctgt
gagtgttctctggatacaagcacgtgtctagccagcaacaagcagatttgtaatggcaga
ggcacatgtgaatgtggcacttgcaagtgtactgaccctaaatttcagggtcccacctgc
gaaacgtgccctacctgtccaggagtgtgcactgaacacaaggagtgcgtccagtgtcgg
gctttcggcacaggtgagatgaaggaaacatgtgaacgcgactgcagctatttcaacttg
atcaaagtgaaggacagggacaagctgcctcagccaaatgacgcctcttaccctgtgatg
cactgtaaggagagggacgccaacgactgctggttctactacacctacgctgtcaacaac
aacacagaaaaggaggtccatgtggttgaaacgctggactgtcctgctggtcctgagatc
atacccattgtggcgggcgtagttactggcatcgtcttaattggtttagctctgctgctc
atctggaagctgctgacaatcatccacgacagaagagaatttgccaaatttgagaaggag
aagatgaatgccaaatgggacacgcaagacaaccccatatacaagagtcctatcaatcag
ttccagaatccaaactatggacgtagagctgctgtcctttaa
DBGET
integrated database retrieval system
