Hippocampus comes (tiger tail seahorse): 109517290
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Entry
109517290 CDS
T04969
Symbol
tspear
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcq03037
]
109517290 (tspear)
04990 Domain-containing proteins not elsewhere classified [BR:
hcq04990
]
109517290 (tspear)
Cilium and associated proteins [BR:
hcq03037
]
Other cilia and associated proteins
Stereociliary proteins
109517290 (tspear)
Domain-containing proteins not elsewhere classified [BR:
hcq04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
109517290 (tspear)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
109517290
NCBI-ProteinID:
XP_019727911
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MHLYVTCNPLVIERRRLGGGSKFRVLGRCERCFCQGSIPHGDTLSGRLNEPKRLPVMMSS
LLLSQLLLLSLRVALMTADLGGQCPDLAPVDLLSTVLEKDAYGLMAGVHVRSSGGVRGIH
FSGPHAPVSLLSNCDHFPKDFSVVVTLKVARIAHKKSEYIFTILEPKRAEPGALKEKVDE
EVREKGNNLQLDISGRRARNNAEHRRLLLGLRLSGKRLHVLFRGQRGVTEQWVFRGAHLA
DDHWHTLVLSVEGRRGRLTVDCGSPRETLPSGPFPSDLSFHVSRFHVGSRGRWKGLFTGL
MRQLVLVPGSDATRQICPSTRAQLAALSVPPLLLSDVPANGKNAARHLAPYGTDVVETEA
RVSVGLQRTCAEPLRGQLWFNPLRKALYLCDGTSWIPVLEDRKRLDYVEEQQVLSTSSET
HDIEVFQLQGLGLMAAMAHRSTTSGSAVYRWSQQNGFQLYQNISTHGALALRHFNLGKKT
FLVVSNSNIGTGVGKEVDVSVIYKWSRKSKQFVEFQNLETHCARDWEAFKIHRHTYLVVA
NHRIGNNNHTIDSIVYKWNRPTKSFEVHQRLRTSGAYDWEFFKVGPYHFLVVANAFDGVT
TSVDSVIYVWVDGNFQILQTIKTFCATDWEMFQIGTRVFLVVANGHRLHDNGSSEYAINS
TIYELDMTGRVFVRFQDIVTYSAVDWEFFTLGEEYFLVVANSFNGESYSLNSVLYRWQGY
EGFVPVHWLPTIGCSDWEFFNAGGDSYLIYSSAKAPLAKVFKLKMY
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgtatgttacttgcaatccgctcgtaattgaaagaagaagactgggcggcgga
agtaaatttcgtgttttgggaagatgtgaaagatgcttttgccaagggagcatcccgcat
ggagacactttgtcagggagactgaatgaaccaaagaggcttccggtgatgatgtcatcg
ctgctactctcccagctccttctgctcagcctcagggtcgctctcatgacggctgacctc
ggaggacaatgtccagatttggctccggtggatcttctatcaactgtcctcgagaaggac
gcctacggacttatggcaggggtgcacgtgaggtcatccggaggtgtacgtggcatccat
ttctccgggcctcacgctcccgttagcctgctctccaactgtgaccatttcccgaaagac
ttctctgtcgtggtcacgctgaaagtggctcgcatcgcacataagaaaagtgagtacatc
ttcaccatactggagccaaaaagagcagagccgggagccctgaaggagaaggtagatgaa
gaagtgagggaaaagggaaataatctgcaattagatatcagcggaagaagagcgaggaat
aacgcagaacaccgccgtctgctcctgggactgagactctccgggaagcggctgcacgtg
ctcttcaggggacagcgaggcgttactgagcagtgggtgttccggggcgcccacctcgca
gacgaccactggcacaccctggttctgtccgtcgaaggccgtcgcggcaggctgacagtg
gattgtggctcgccgcgggaaacccttccctccgggcctttcccatcagacctcagcttt
cacgtgtccagattccacgtcggtagccggggcagatggaaaggattgtttacgggcctg
atgcgacagttggttctggtgccgggttcagatgccacccgccagatatgcccgtccacc
cgagctcaactcgcagctctatcagttccgccgttgctgctgtcagatgtgcctgccaac
gggaagaatgccgcgcgtcacctcgccccttacggtacagatgttgtggaaaccgaggcg
agggtgtcggtgggcttacagcggacgtgcgcggaaccactccggggccagctgtggttc
aatccgctcaggaaagctctctacctttgcgatggtacctcgtggatccctgtgctggag
gatcgcaaacgactggactacgttgaggagcagcaggttctcagcaccagctcagagaca
cacgacatcgaggtcttccagttacagggcctgggtctgatggctgccatggcccaccgc
tccacgacgtctggctccgcagtgtataggtggagccaacagaacggcttccagctgtac
cagaatattagcacccacggagcactggcattgaggcatttcaatttgggcaagaagaca
ttcctggtggtgtccaactctaatataggcaccggtgtgggaaaggaagtcgatgtctct
gtcatttacaagtggagccggaaaagcaaacagtttgtggagtttcagaacttggagaca
cactgcgcacgcgactgggaggccttcaaaattcatcgacacacctatctcgtagtcgcc
aatcacaggataggtaataacaaccacaccatagacagcatagtgtacaaatggaaccgg
ccaactaagtcctttgaagttcaccagaggttgagaacgtctggggcttacgactgggag
ttcttcaaagtgggaccttaccattttctggtggtggcaaacgcctttgacggagtaacc
acgtcagtagactctgtgatctacgtttgggtggacgggaactttcaaatcctccaaacc
attaagacgttttgtgccactgactgggagatgttccagataggcacacgggtcttcctt
gtggttgccaacggacaccggctccatgacaacgggtccagtgaatatgccatcaactcc
actatctacgagctggacatgaccgggcgggtgtttgtccgcttccaggacatcgtcacg
tacagcgcggtggactgggagttcttcactctcggggaggaatatttcctggtcgttgcc
aactcctttaacggcgagtcgtactctctcaacagtgttctttacagatggcagggctac
gagggcttcgttcccgtccattggctcccgaccatcggctgcagcgactgggagttcttc
aatgctggcggagactcttatctgatctactcaagtgcgaaagcgcctctcgccaaagtg
ttcaagctgaaaatgtactga
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