Hippocampus comes (tiger tail seahorse): 109517638
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Entry
109517638 CDS
T04969
Symbol
col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hcq00535
]
109517638 (col14a1)
Proteoglycans [BR:
hcq00535
]
Extracellular matrix (ECM) proteoglycans
Others
109517638 (col14a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
NDNF
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
109517638
NCBI-ProteinID:
XP_019728475
LinkDB
All DBs
Position
Unknown
AA seq
1870 aa
AA seq
DB search
MSLVVRMFSQSCLWAPLVLLAVISHFPSKGQDQVPAPRRLRFKVLNPNNLLVSWKEPKGD
FDSYLFLYNSIPGGHQREIIISKSDSKVLITDYDPVKDYVVNVISVSGSTQSRALLGRFK
AIERGEGDGVGKTEPQRMPDSFILPENVNEISGADQFLCHTESIADIVILVDGSWSIGRL
NFRLVRMFLENLVNAFDVGINKTRIGLAQYSGDPRIEWHLNAFTTKEVVIDAVKNLPYKG
GNTLTGLALSYILENCFKPESGARVGVPKIGILITDGKSQDDVIPPAESLQKAGVELFAI
GVKNADENELRSIASEPDDSHVYNVADFNVMSSIVEGLTRTVCEQVEQQEKDIKEQQPPE
RIGSPSGLVTSEVTAKNFRVTWRHSPGNVEKYRVVYFPVHGGQPQEAVVDGRDTSVVLRH
LNSQTEYQLSVFAVNENEASEPLRGYETTLALPTVTGLQLFDVTHNSIKARWDNVKGASG
YMVLYAPLTDEGDLAEQEVKVSNAVNQLELDGLIPHTEYTVTVYAMFGEEASEPITNQET
TLPLRAPSNLQFSDITHNSAHISWDPAASGVTGYRIMWVNTDGRVTEEVEVGPINSYDLS
GLRSLMEYSVVLFALYDEGQSEPLTDGFTTPPVPGPLHLRSSDVSADGFQVSWDHSADDI
TVYRLSWAPLTGGDTKEVVLGGSDNRYSLTDLSPSTAYEVMVMAVFKDQSESDAVSVTET
TLAKTTTIATATSAPRQTVRNLHLSDETTESLKASWELDDPRVERFRLSYITIGAGHKEE
TVLVPGRQKSMLLESLLPDTQYKVTVMPVYTDGDDGVSVSAQGTTLPLLSPENLRASEEW
YNRFRVTWDPPQSTTVGYKILYQPVHVPGRILEMTVSDDVNSVLLQNLQSGTAYSVQVTA
SYPSGQSEPLLVNAKTLVLGVSNLTVYQVRHNSMCVQWQPHLHADYYRISIQSTLNSQRQ
EVSLGGGVSRHCFYDLFPSSQYEISIHAQMQGMEGPPISVTDMTLPAPTPAPTEPPSTEP
PPTIPPAKEVCKEAKADLAFLVDGSWSIGDDNFMKITNFLYNAIGSLDQIGPDGTQVAIC
QFSDDARTEVQLSSHANKEALLETIQRIKYKGGNTKTGRAIKHVKESIFTSDAGARRGVP
KVLVVLTDGRSQDDVNKVSKEMQMDGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDL
DSVKKIEEQLITFVCEAATATCPSILMSGNSMAGFRMMEKFGLVEKEYSTISGVSLEPGS
FNSFPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMIRLLPETPHEPFALWEILDKDTKP
LVGLILDNSRKSLTFFTYDYKGDFQSVTFEGTQIKKFFHGSFHKLHVTISKTAVKVVLDC
AVVGEKAITAAGNITTDGVEVLGRMVQSRGRGDNSASFQLQMFDIICSTSWASRDKCCEL
PALRVEEECPSMPHACTCSQDSKGPPGPTGPPGGPGIRGTRGDRGEPGVTGLQGPVGEAG
SAGLPGPPGPQGPSGLSIQGPQGAAGEKGETGEIGPAGPMGVPGNQGSPGRDGPPGARGL
PGNNGPQGRQGPPGPLGAPGAPGAPGPIGSAGPQGGQGPSGPAGIKGDKGERGDVPSQAA
VRTIARQVCEQLIQSHMSRYNSILNQIPVQSTASVRTVPGPPGEPGRRGPPGPQGEQGPS
GRPGFPGSNGQSGRPGERGLAGEKGERGSPGVGSQGPRGPPGPPGLPGEGRTGSQGPLGR
PGNPGAPGRPGNPGSSGPAGPPGYCDQNSCLGYNVGVQTLPHGGYQPYNQPYNPSAVAYN
NDQEARSDEEGEEEEGEMDPYYHSYPYRYGYPSDLSEDVELRSPGVVRRLTRDVFVIEEN
DKEDALIPSA
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggttgtgaggatgttttctcagagctgtctgtgggctccgctggtgttactg
gctgtcatttcccattttcccagtaaaggacaggatcaagttccagctccgaggaggctg
cgtttcaaagtgctgaacccaaacaacctgctcgtctcatggaaggagcccaaaggcgac
tttgatagctacttgttcctctacaacagtataccaggtggccatcagagggagatcatc
atatcaaaaagtgacagtaaagtattgataacggactatgaccctgtcaaggactacgtc
gtcaatgtaatttctgtcagtggcagcactcagagcagagcactgctgggcagatttaaa
gcaattgagaggggcgagggtgatggagtgggcaaaacagagccacagcgaatgcctgat
tcattcattcttcctgaaaatgtcaacgagatttccggagcagaccagtttttgtgccac
accgagtccatagcagacattgtgatcctggtcgatggctcttggagtatcggtcgtctc
aacttccggcttgttcgcatgttcctggaaaacctggtcaacgcctttgatgttggcatt
aataaaaccaggattggtctggctcagtatagcggtgatcccagaatagagtggcacctc
aatgctttcacgacaaaagaagttgttatcgatgctgtcaagaaccttccctacaaagga
ggaaacaccctcacggggctcgcactgtcctatatcttggagaactgtttcaagcccgag
tctggtgcccgtgttggtgtacctaagatcgggatcctcattactgatgggaagtctcag
gatgatgttataccgcctgcagaaagcctgcaaaaagctggggttgagctgtttgcaatc
ggtgtaaagaatgctgatgagaacgagctgcgctccatcgcctcagagccagatgactct
catgtatataacgttgccgacttcaacgttatgagctccattgttgaaggactgacgaga
acagtgtgtgagcaagtggagcagcaagaaaaggatattaaggaacaacagccgccagag
agaattggatcaccgtcaggcttggtgacatcagaggtcactgccaagaacttccgagtt
acatggcgccactcccctggaaatgtagagaaatacagagtggtttatttccctgttcat
ggaggacaaccacaggaggctgttgtcgacggccgtgacacctccgtggtgttgcggcat
ctcaactcacagaccgaataccagctgtctgtgtttgctgtgaatgaaaacgaggcgagt
gaaccactaagaggatatgaaacaaccctggctcttcccacagtgacaggcctccagctg
ttcgacgtgactcacaacagcataaaagcaagatgggacaatgtgaaaggagcatcaggc
tacatggtgctttatgcgccgcttacagatgaaggagacttagctgaacaggaggtcaaa
gtgtcaaatgcagtgaaccagctggagctcgatggtctgatccctcacactgagtataca
gtcactgtttatgctatgtttggagaagaggctagcgaacccattacaaaccaggaaact
actttaccactcagagcgcccagtaacctccagttctctgacatcacgcacaactcggca
cacatcagctgggaccccgctgccagtggagtaactggttatcgtatcatgtgggtcaat
acagatgggcgggtcactgaggaggtggaagttgggcctataaactcttacgacctcagt
ggactgagatctttgatggaatactcggtggttctctttgctctgtatgatgaaggccaa
tcagagccgctcactgatggattcacaactcccccagttccaggtcccctacatctccgt
tccagtgatgtcagtgcagatggctttcaggttagctgggatcactcagcggatgacatc
accgtctatagactctcctgggcaccactcacaggtggcgacacaaaggaggtggtcctt
ggtggaagcgataatcgatacagtttgacagacctgagtccttccactgcgtacgaagtt
atggtgatggcagtcttcaaagaccagtcagagagcgatgctgtgtctgtcacagagacc
acattggccaagacaacaacgattgccaccgcaacctctgccccccgccaaacggtgaga
aaccttcatctgagtgatgagaccacggagagtctcaaggcatcatgggagctggacgac
ccccgtgtggagaggttcaggctgtcctacatcaccatcggggccggtcacaaagaggag
acggtgttagttcctggccgtcagaaaagtatgttgctggaatccttacttcctgacact
cagtacaaagtgactgtcatgccagtgtacaccgatggggacgatggcgtcagtgtgtcc
gcacaggggacgacattgcctctcttgtctcctgaaaaccttcgtgcatcagaagagtgg
tacaaccgcttcagggtcacctgggatcctccacagtctacgactgtgggttacaagatc
ctttaccagccagtccatgtaccagggagaattttggagatgaccgtgagtgatgacgtt
aactcggttctcctccagaatttgcagagcggcacagcgtacagcgtacaagtgaccgcc
tcctacccttcaggacaaagtgaaccattgctagtgaacgctaagacattggtcctgggt
gtctccaacttgacagtctaccaggttcggcacaacagcatgtgcgtgcaatggcagcct
catctgcacgccgactattacagaatctccatccagtccacactcaacagtcagcgacag
gaagtgagtctaggaggcggggtttctcgacattgcttctacgacctttttccaagcagc
caatatgagatcagcattcacgcgcagatgcagggaatggaaggacctcccatctccgtc
actgacatgacactgccagcgccaactccggctccgactgaacccccttctacggagccc
cctcctaccatcccacctgccaaagaagtatgcaaggaggccaaggcggacctggcattc
ctggtcgatggctcctggtcaattggagatgacaacttcatgaagatcacaaatttcttg
tataatgccattggatcactggatcaaattggcccagatggcacccaggtggccatttgt
cagttcagtgacgatgctcggaccgaggtccagttgagttcccatgctaacaaagaagca
ttgctggaaacgattcagaggatcaaatacaagggaggcaatacaaagacaggtcgagcc
attaagcatgtgaaggagtccattttcacctctgatgcgggagccaggaggggggtaccc
aaagtcctggttgtcctcactgatggccgttcacaggatgatgtcaataaagtatccaag
gagatgcagatggacggatacatcatttttgccattggctttgcggatgcagattatggg
gaactagtcaacattgccagtaagcctagtgacagacatgtcttcttcgtggatgatttg
gattctgtgaagaaaatcgaagagcagctcattacttttgtctgcgaggcagccactgcc
acttgtccgtctattctgatgagtggaaacagcatggcaggttttcgaatgatggagaag
tttggtttggtggagaaggaatacagcaccatatctggagtgtctctggaaccaggatca
ttcaacagcttcccatgttataggctacaccgcgacgctctggtgtcacagcccaccaag
taccttcatcctgaaggtttaccatctgactacaccatctctatgatgatccgcctgctc
cccgagactccacatgagccctttgcattgtgggaaatcctcgataaggacaccaagcca
ttggttggactcatcttggacaactcaaggaagagtttgacattcttcacctacgactac
aaaggagactttcagagtgtcacctttgaaggaactcaaataaaaaaattcttccatgga
agttttcacaagctccatgtaaccatcagcaagacggcagtgaaggtggtgttggactgc
gccgttgtgggagaaaaagccatcactgcagccgggaacatcaccacggatggcgtggag
gtcctgggtcgaatggtgcagtctcgaggcagaggagacaactctgcttcgtttcagctc
cagatgtttgatatcatctgcagtacgtcgtgggcaagcagggataagtgttgtgaactg
ccagctttgcgagttgaagaggagtgcccctcaatgccccatgcctgcacctgctctcaa
gatagcaagggacccccaggacctaccggacctcctggtggtccagggatacgaggaaca
cgaggagacaggggggaacctggagtgacgggtcttcaagggcctgtaggagaagctggc
tctgctggattaccgggaccaccaggtcctcagggacccagtggcctctctattcaaggg
cctcaaggggctgctggggagaagggagagacgggagagattggcccagccggcccaatg
ggtgttcctggaaaccagggttccccgggtagggatggtccccctggagccaggggccta
ccaggtaataatggacctcagggtcgacaggggccgccgggccctcttggagccccaggt
gcacctggagctccaggaccgattggatcagcaggtcctcaaggggggcaaggaccttct
ggtcctgctggtatcaaaggagataaaggagaaagaggtgacgtgccgtcccaagcagca
gtgcgtactatcgcaagacaagtgtgtgaacaactcatccagagccacatgtcgcgctac
aactctatcctgaaccagatcccagttcagtcaactgcgtcagtacgtacagtgcctgga
ccgcctggtgagcctggcagaagaggccccccaggacctcagggagagcaaggaccatcc
ggcaggcccggtttccccggttctaacgggcagagtggacggccaggagagcgaggtctt
gcaggggagaagggggagagggggagtccaggtgttgggtctcaaggacctaggggacct
ccaggcccaccaggcttaccaggtgaggggcgcacaggtagtcaggggcccctcggtcgg
cctgggaacccgggggcaccagggaggccgggcaatccaggttcttccggaccagctgga
ccaccgggttactgtgaccaaaactcttgtttggggtacaatgttggagtccaaacattg
cctcatggtggctaccaaccctacaaccaaccctacaacccttctgcagtagcttacaac
aacgaccaagaagcccgaagtgacgaggaaggagaggaagaggagggtgaaatggatcct
tattatcatagttatccctatcgctacggttacccttctgacctctcggaagatgtggag
ctgcggtcacctggcgtggtcaggaggttgacccgcgacgtcttcgtcatagaggagaat
gacaaggaggacgcactcatcccaagcgcttga
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