Hippocampus comes (tiger tail seahorse): 109517791
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Entry
109517791 CDS
T04969
Symbol
dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109517791 (dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109517791 (dcp1a)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109517791 (dcp1a)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109517791 (dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
109517791 (dcp1a)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109517791 (dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
109517791
NCBI-ProteinID:
XP_019728721
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MDSANAGHMMSLAALQRQDPYINTLLDVTGQVALYNFNSKANEWEKTEIEGTLFVYTRSA
SPYHGFTIMNRLSTENLVEPINKDLEFQLQEPFLLYKNYNMGIYSIWFYDKRDCQRISQL
MVKIVKLEAEHAQRQSPEKEEPRRPNGVAEGRPRDILELLSKAKEEYQKAQSGDAEVSTE
PNATEAFNHVHSCQPPDKKTHTMVKQITVEELFGSSIPKDPSLPAMPTPNPAAASSEPSA
TYPQNQTYPPPVHPKPLCPPHLAGQDPGSNQVHQGHSLLPTSYALHPNPAFQPVGPGAEP
RSLGPLIPLMVPPAGSQTPTVPAGSAVASAVASAVPRAYLEQELLSSLKPSVQSLNAEIH
KPILAPNFLPSTLVPPHNFQERMREPVLQLTQEMDVLSKAPNLIKPLAAVPMSLGLGISG
SDSSVLLSPSAFQQSLDKAAAAVVPSPSSELPTTSAGSMEAPQPSCNKAQLQKTLIHLIK
NDPAFLGAIHDAYLRSLAKDFSNLKL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggactccgcaaatgctggacatatgatgagcttagcggctctccaaagacaagatcca
tacataaacacgttgcttgacgttaccggccaggtagccctgtacaacttcaactccaaa
gccaacgaatgggagaagaccgaaatcgagggcaccctgtttgtttatacgaggtccgct
tccccttaccatggcttcaccatcatgaaccgactgagcacagagaacctggtcgagcca
atcaacaaagacttggagtttcagctgcaggagcctttccttctctacaagaattacaac
atgggtatctacagtatttggttctatgacaagagggattgccagcgcatttcacagctc
atggtgaaaattgtgaaactagaggctgaacatgcccaaagacaatcaccagagaaggag
gagcccaggcggcccaatggtgtggccgaaggacggcccagggacatcctggagttgctt
agcaaagccaaggaggaataccagaaggctcagtccggggatgctgaagtatctacagag
ccgaacgccacggaagctttcaatcatgtgcacagttgtcagccgcctgataagaagact
cacacgatggtgaagcagatcacagtcgaggagcttttcggctcatccatccccaaggac
ccttctctgcctgccatgccgaccccaaatccagccgctgcttccagcgagccgtcggca
acctacccccagaaccagacctatccacctccagtccacccaaaacctctctgccctccc
caccttgctggccaggatcccgggtcaaaccaggttcaccaaggacacagcctgctccca
acatcttatgcgctacacccgaaccccgctttccaaccagtgggcccgggggccgagccc
cgatctcttggcccgctcatacctctcatggtgccaccagctggttcccaaactccaact
gttcccgctggctctgcggtggcatccgcggtggcatccgcggtaccccgagcctatttg
gagcaggagctcctaagctcactgaaaccatcagtccagtcgctgaatgcggaaatccac
aaacccatcctagcgcccaatttcctgccgagcaccctggtaccacctcacaacttccaa
gaacgtatgagggaaccggtcctccagctcacgcaagaaatggatgttctctctaaagcc
ccaaacttgatcaaacctctcgcggccgtccctatgagtctcggtcttggcatttctggg
tcggattcttctgtgcttctgtcccccagcgccttccagcagtccctcgacaaggcggct
gcagcagtcgtcccttcaccctcctccgaactcccgaccacctctgcggggtctatggaa
gccccacaaccgtcctgcaacaaagctcagctccaaaagactctcatacaccttattaag
aacgaccccgcgttcctcggagccattcatgacgcgtacctgcggagcctggccaaggac
ttcagcaacctgaagctataa
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