Hippocampus comes (tiger tail seahorse): 109518121 Help Entry 109518121         CDS       T04969                                  Symbol cdc40 Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism hcq  Hippocampus comes (tiger tail seahorse) Pathway hcq03040   Spliceosome Brite KEGG Orthology (KO) [BR:hcq00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     109518121 (cdc40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hcq03041]     109518121 (cdc40) Spliceosome [BR:hcq03041]  Complex C   Other components    Step II factors     109518121 (cdc40) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I WDR55 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 DSE1_N ASA1 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_DCAF4 PAC11 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_NOL10_N WDR90_beta-prop_4th TRM82_WD Beta-prop_SCAP CFAP251_N Beta-prop_NWD2_C WD_LRWD1 UCP007778 Beta-prop_Vps41 YJR039W_M Beta-prop_IFT140_1st Motif Other DBs NCBI-GeneID:  109518121 NCBI-ProteinID:  XP_019729347 UniProt:  A0A3Q2YXE3 LinkDB All DBs Position Unknown AA seq 581 aa AA seqDB search MSAAVSSLVSYGSDSDSENESKSATSPKRLDTNDPDATAHLKPLQTGPIMALAVLNSAPE VAVKESVETGVHLDPSVKEVAYNPRYETMFAPEFGPENPFKTQQMAAPRNMLSGYVEPAH VNDFMFEQQRRTFSSLGYALDPSVDTNQVTGTSYIGAVDEAEKNQGLTVFESAYKKPDKR KKVKGGDAGDIDNYLGPWAKYVDEKSVAKPTEEEKKELDEITAKRQKRGRKEEEAPAEEK TILHVKDMFDYQGRSYLHIPQDVGVNLRSTEAPDKCYLPKKQIHVWSGHTKGVSAIRLFP LSGHLLLSSSMDCKIKLWEVYNERRCIRTFIGHSKAVRDICFNNTGKQFLSAAYDRYIKL WDSETGKCISRFTNRKVPYCVKFNPDEEKQNLLVAGMSDKKIVQWDIRTGEVVQEYDRHL GAVNTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC QSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWK TTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD NT seq 1746 nt NT seq  +upstreamnt  +downstreamnt atgtctgccgccgtatcatccctcgtttcgtacggcagcgattccgattcggaaaatgag tcaaaatccgctaccagtcccaaaaggttggacacgaacgacccggacgcaacagcacac cttaaacctctccagactggtccgataatggccttagcggttcttaattccgctcccgaa gttgctgtcaaggagtctgttgagactggcgtacatcttgacccttccgtgaaagaagtc gcctacaacccgagatatgaaaccatgtttgcgccagagtttggaccggaaaatccgttc aaaacccaacagatggccgccccgaggaacatgttatccggctacgtcgaacccgctcac gtcaacgacttcatgttcgaacagcaaaggaggaccttttcgtcgcttggctatgcatta gacccatctgtggacacaaaccaagtaaccggcactagttacatcggcgcggtggacgag gctgagaaaaatcaagggttgaccgtgtttgagagcgcttacaagaagccagacaaaagg aagaaggtcaaaggcggtgacgcgggagatatcgacaactacttgggaccgtgggcgaaa tacgtcgatgagaaatctgtggccaaacccactgaggaggagaagaaagagctggatgag atcaccgccaaaaggcaaaaacgcgggaggaaagaagaagaagctccagcagaagagaag accattcttcatgtcaaagacatgttcgactaccagggcaggtcctacctgcacatccct caggacgtgggagtcaacctgcgttctaccgaggcaccagacaagtgctacctgcccaaa aagcaaattcacgtttggtctgggcacacgaagggggtcagcgccatccgattgtttccc ctttcaggtcatctcctgctttccagctccatggattgtaagattaagttgtgggaggtg tacaatgagaggaggtgtatacggacttttattggccacagcaaagcggttcgagacatt tgcttcaacaacaccggcaagcagttcctcagcgccgcctacgatcgctacatcaaactc tgggactctgagaccggcaagtgcatctcccgattcaccaaccggaaagtgccgtattgc gtcaagttcaatcccgacgaagaaaaacagaatcttttagtggccggcatgtcagataag aagatcgtccagtgggacatcaggaccggcgaggtggtccaggagtacgaccgtcacctc ggcgccgtcaacaccatcacgttcgtggatgagaatcggcgctttgtcagcacgtcggat gacaagagtcttcgagtttgggagtgggacatccccgtggacttcaagtacatcgccgag cccagcatgcattccatgccggccgtgacgctctctcccaacggtaaatggcttgcatgc cagtccatggacaatcagattctgatctttggtgcccaaaaccgcttccgactgaacaag aagaagatctttaaaggccacatggttgccggctacgcctgccaggtggacttttccccc gacatgagctacgtggtgtcaggcgacgccgacggaaagctgaatatttgggactggaag acgaccaagctgtaccacaggatcaaagcgcacgacaaggtgtgcatcagcgccctgtgg catccccacgaaacctccaaggttatcacctgcggttgggacggacaaatcaaactctgg gattag

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