Hippocampus comes (tiger tail seahorse): 109518270
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Entry
109518270 CDS
T04969
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hcq00535
]
109518270
00536 Glycosaminoglycan binding proteins [BR:
hcq00536
]
109518270
04091 Lectins [BR:
hcq04091
]
109518270
Proteoglycans [BR:
hcq00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
109518270
Glycosaminoglycan binding proteins [BR:
hcq00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
109518270
Lectins [BR:
hcq04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
109518270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
UL45
Sgf11_N
Ig_3
I-set
ig
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
109518270
NCBI-ProteinID:
XP_019729582
LinkDB
All DBs
Position
Unknown
AA seq
1408 aa
AA seq
DB search
MTSLLLLCVSLPFISATTSFAHQDGLDGTLRVSIPSAVPLRPLLGGKVVVPCYFQDNTAS
DPGAPTIAPLSHRIKWSFVTKENVTTILVASEGKVHVEREYLDRVTMVNYPLVSTDASLE
ITELRSKDSGTYRCEIMHGIEDNYDTVDIQVQGIVFHYRAITTRYTLTFEKAKAACIQNS
ATIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPRKECYGDKENFPGVRTYGVRDVN
ETYDVYCFAEKMAGRVFYSMSVEKFTFHEAKDQCNKLGARLATTGELYLAWKGGMDVCNA
GWLGDRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPITSSRYDAICFQGSDDEGAVP
GRITPFPDIMSITPAPGVYAGLTTPPGGQEIKHGGVDILTKPISPPFTDAAMGPTGVVFH
YRPITGRYTLTFLEAQQACKSIGAVIASPLQLQAAFEKGLHQCDAGWLGDQSVRYPIVSP
RDNCAGNLLHLPGVRSYGLRPDTERYDVFCYVERLEGEVFFTSDYDSFSFEEAVQHCEKL
NTTLATTGQMYAAWNQGLDKCRPGWLMDRSVRYPITTSRSYCGGGQVGVHIIYAFPNQTG
FPDEHSRYDAYCFKAETRTIEIDSKTTIDTVSETIFDKLLTVDVVSKTTVAADHATTTIE
PPVGYTDTETIANITEIEVVIQKTNITTQLTIPTVSVDGSASGSGDHSANGDLQISGDHS
ASGDLQISGDHSASGDLQISGESSTTSGSGASGSGLDVTFSGHTDILSGDHSASGDPQGA
EGGSAIFTSGDSYSGSGSGSGFLVSGSGSASGSEDISGSSGEILINILDGKERELLIPTL
TEQELGSGVLWTSGMSGSGSMSGSEVMSGSGSGFSGITFTDNSVVDLTVQQSGEQELYGS
AEMSGSGSISGSGFLSGSGSGEFSGITFTDNVAVDVTVHQSGEQELYGSAEMSGSGSISG
SGFLSGSGSGEFSGITFTDNGAVDLTVHQSGEQELYGSAEMSGSGSTSGSGSMSGSGMSG
FSGISFTDNSAIDLTVQPSGDQELSGFPPYASGFPSGAPSGFPSGVSGSGSASGQPSQTE
GDIIFLTDDGIKEVIVSPQEHHPEEGRGVVEISGQESGSGTHLQISGSDKPSTAGLSIAF
PPGSTMTYPDYNGPSEHEEATVIVMTSDPTYISPTTAPSFSLATAPVVEEPEVEEAVNSC
PEGWLEFMGSCYLHFADRHTWSDAEQRCRELNAHLVSVRSEEEQQFLNSKGQDYEWIGLN
DKEVQNEFRWTDGSALTYENWRPNQPDNYFNSGEDCVVMIGHEGGQWNDVPCNYYLPFSC
KTQPAGCGAPPEVAHGSPMGVTRDRYAVNSKVRYQCQAGYTQRHLPVIRCMENGQWESPQ
VECTETGGNRLHKRSVRSRSRGVSSRRE
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgacttccctgcttctgctgtgtgtctctttgcccttcatttcagcaacgacatcattt
gcacaccaagatggcttggacggcacactccgtgtcagcatcccatcggcggtgcctctc
cgcccacttctggggggcaaggtggtggtgccctgctacttccaggacaacactgccagt
gacccaggcgcaccgaccatcgcgccactctcccaccgcatcaaatggagtttcgtcacc
aaagagaatgtcacaaccatcctggtggcatcggagggcaaagtccacgttgagagggag
tacttggacagagtaacaatggtcaactacccgctggtgtccacagacgccagcttggag
atcacggagctgaggtccaaagactcaggcacctaccgctgtgaaatcatgcacggcatc
gaggacaactatgacaccgtggacatccaggttcagggtatcgtgttccactatcgagcc
atcaccacccggtacaccctcacctttgagaaggccaaggccgcttgcatccaaaacagc
gccaccattgcaacccctgcccaactgcaggccgcctacgatgatggataccaccagtgt
gatgcaggatggctgtctgatcagactgttaggtaccccatccacgagcctcggaaggaa
tgctacggagacaaggaaaactttcccggcgtgagaacctacggagtgagagacgtcaac
gagacttacgatgtgtactgttttgctgagaagatggctggtagagtcttctactctatg
tcagtagagaagttcactttccacgaagctaaggatcagtgcaataaactgggtgcccga
ctcgccaccaccggagagctttatctggcctggaagggcggcatggacgtgtgcaatgcc
ggctggttgggcgacaggagtgtacgctaccccatcaacattgccaggcctcagtgtgga
ggcggcctcttgggagtcagaacggtctacctgttccctaaccagacaggataccccatc
acgagctctcgttacgatgctatctgcttccaaggtagcgatgacgaaggtgcagttccc
ggccggatcactcctttcccggacatcatgagcataacccctgcccctggagtttatgca
ggactcacaacccccccagggggtcaagagatcaagcacggtggtgtggacattctcacc
aagcctatctcacctccttttacagatgccgccatgggtcccaccggcgtagtgttccac
taccgacctattacaggtcgctacacgctgacctttctggaggcccaacaggcctgcaag
agtattggagcagtcattgccagccccctgcagctacaggcagcctttgagaaaggcctg
caccaatgtgacgctggttggcttggtgaccagagcgtgaggtatccgattgtgtcaccc
cgagataattgtgcgggcaatctgctgcaccttccgggagtccgatcctatggcctgagg
ccagacacagagcgttatgatgtattttgttatgtcgaacgtctggaaggtgaggtcttc
ttcaccagcgactatgacagcttctccttcgaggaggccgtgcagcactgtgagaaactc
aacaccacgctggccacaaccgggcagatgtatgccgcgtggaaccaaggcctcgacaag
tgccgcccaggttggctgatggaccgcagtgtccgatatcccatcacaacctccagatcc
tactgtggaggaggccaggtgggcgtgcacatcatctatgcattccccaaccagactgga
tttcctgatgagcactcccgctatgacgcctattgtttcaaagctgaaacacgcaccatt
gaaattgacagcaaaaccaccattgacactgtcagcgaaaccatttttgacaaattactg
acagtggatgttgtcagcaagacaacggttgcagctgatcatgccacgactactattgaa
cctcctgtgggttacactgacaccgaaacaattgcaaacatcacagaaattgaagtggtt
atccaaaagaccaacatcacaacccagctaacgattcctactgtttcagttgatggttct
gcatctggatcaggtgatcattcagccaatggtgaccttcaaatctcaggcgatcattca
gccagtggagatcttcaaatctcaggcgatcattcagccagtggggatcttcaaatctca
ggcgagtccagcaccaccagcgggagcggagcttctggttcaggacttgacgtcaccttc
agtggacacactgacatcctgtcaggagaccattctgcctctggtgatccgcaaggagca
gagggtggcagtgcaatcttcacctctggagactcctatagcggatcaggatctgggtct
ggatttcttgtgtcaggatcaggttctgctagtggcagtgaagacattagtggcagcagt
ggtgaaattctgatcaatatactggatggaaaggagagagaactgttgatcccaaccctc
actgagcaggagttaggtagtggggtgttgtggacttcaggtatgtccgggtcaggaagc
atgtctggatcagaagttatgtctgggtcaggcagtggattttctggtataacctttaca
gacaacagcgtcgttgacctgacagttcagcaatcaggagagcaggagctgtacggatct
gctgaaatgtccggatcaggatctatttccggatcaggttttttgtccgggtcgggctcc
ggtgaattttctggcatcacctttacagacaacgttgccgtcgacgtcacagttcatcaa
tcaggagagcaggagctgtacggatctgctgaaatgtccggatcaggatctatttccgga
tcaggttttttgtccgggtcgggctccggtgaattttctggcatcacctttacagacaac
ggtgccgtcgacctcacagttcatcaatcaggagagcaggagttgtatggatctgctgaa
atgtctggatcaggatcgacgtctggatccggctccatgtcagggtcaggcatgagtgga
ttttctggcatctcctttaccgacaacagtgccattgacttaacagtccagccatcagga
gatcaggagttgtctggatttccaccctatgcatccggtttccccagtggcgctccgagt
ggttttccatctggtgtttcaggcagcggttctgcctctggccaaccttcccagacagaa
ggtgacatcatctttctaacggatgatgggataaaggaagttatcgtttctccccaggag
catcatccagaagagggccgcggggttgtagaaataagtggccaggaaagtggttcagga
acccatcttcaaatctcaggcagtgacaagccgtcaactgctgggctttctatagctttt
cctcctggatcgactatgacctacccagactacaatggaccgtctgagcacgaggaggcc
acagtaatcgtcatgacatcagaccctacctacatcagcccaaccactgcaccatcgttt
tcactggctaccgctcctgttgtggaggagccagaggtagaagaggctgttaatagttgt
cccgagggctggttggagttcatgggaagctgttacctccactttgctgacagacacacc
tggtcagatgctgagcagcgttgccgggagctcaatgcccacttggtcagcgtcagatct
gaagaggagcagcagtttctcaactccaaaggtcaagactatgagtggatcggtctcaac
gacaaagaagtccagaatgaattccgctggacagacggcagcgctcttacgtacgagaac
tggagacctaaccaacctgacaactacttcaactctggggaggactgcgtggtcatgatc
gggcacgaaggaggccagtggaatgacgttccttgcaactactaccttcccttctcatgc
aagactcaacccgcggggtgcggagcgcccccggaggtggctcacggctcaccaatgggc
gtcaccagagatcgctacgccgtcaactccaaagtgcgctaccagtgtcaagcgggctac
acgcagcgccacctacctgtcatacgttgtatggaaaatggacagtgggagagtccacaa
gtggaatgtacagaaactggcggcaacaggctacacaaacgatcggtgaggagcagaagt
cgaggagtcagcagccgacgggagtag
DBGET
integrated database retrieval system
