Hippocampus comes (tiger tail seahorse): 109518475
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Entry
109518475 CDS
T04969
Symbol
dhx36
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109518475 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109518475 (dhx36)
03012 Translation factors [BR:
hcq03012
]
109518475 (dhx36)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109518475 (dhx36)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109518475 (dhx36)
Translation factors [BR:
hcq03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109518475 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
DEAD
Helicase_C
OB_NTP_bind
HA2_N
AAA_22
nSTAND3
NB-ARC
ATPase
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
109518475
NCBI-ProteinID:
XP_019729874
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MSSKYGGGGRGRRGGSSRGSSRGHRDGSRERAGRGGGNSGSFDLDNASGRHPSHLKGREI
GLWYAKFGAVRKKQADRRSRAVVQMDEAREQHIIKLLDSVQNDQSALERPNRDARGSALD
GWRAPPSKSSHCYFDGDMTEEEKERIKFEEEGSISQAVVKDEIPDTWDDDDDDDADDDVI
DHRDDDDDDDDDVEQQQMKGGEDREKDKDLEFLLQEIARDVSLDESLKRDLQSKKTHPKY
KEMLMFREKLPSYGKKEELVRLINSNQVLVVSGETGCGKTTQVTQFILDDHIKRGMGSMC
RVVCTQPRRISAISVAERVAAERAEKVGSGNSCGYQIRLQSQLPRRQGSVLYCTTGIILQ
WLRSDPQLSSISHLVLDEIHERSLHSDVLLTIVKDLLDVRHDLKVVLMSATLNAEKFSKY
FDSCPMIHIPGLTFPVEEFLLEDVVEMTRYRPKNQDRRPAWKRGFWQGRHSRPEKEEKEA
EYKESWPCYARTLQAKYSESTIAALEMLDGDDKIDLDLILALIRHIVLNDEEGAILVFLP
GWDNISSLNDLLMAQQMFRSDRFIIIPLHSLMPTVNQTLVFKRPPPGVRKIVIATNIAET
SITIDDVVFVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVCPGKCYHLYN
GLRASLLDAYQLPEIMRTPLEELCLQIKILKLGGIAHFLQKALDPPTEKAVNLAIKNLKD
LNALDHSENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLG
KEQMADKRRKVLSRNSKSDHLTVVNAFQGWQEAKQHGGRYEREFCWDNFLSANTLQMLHN
MKGQFAEHLMHTGFVSSKDPKDPNSNVNSGGXDRRSCHSKKRPGVKVYTKHDGKVCIHPK
SVNYEETNFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQKDDDQETIAVDQ
WIVFRSPARTAHLVKNLKRELDSLLEDKIRKPAPVDWQNHHSKDCAVITAIIDLITTQEM
TATAAGPEGGARGHDRTWAPRGQHIYFNDDGDDDDN
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgagttctaaatacggaggcggtggccgaggcagaagaggtggtagtagtagggggagc
agtagaggccaccgtgatggcagcagagaaagagccggccggggaggtgggaatagtggc
agcttcgacctggacaacgccagtggtcgccatccttcacatttgaagggccgagagatt
ggcttgtggtatgcaaaattcggagccgtgagaaagaaacaggcagaccggcgatcgagg
gcagtggtccagatggatgaggccagagagcagcacattatcaagctgctcgactctgtc
cagaatgaccagtcagctctggaaagaccaaacagagatgcgagaggctctgcattggac
ggctggcgtgcacctcccagtaaaagtagtcactgctactttgacggagacatgactgaa
gaggaaaaagagagaatcaaatttgaggaggagggttcaatctctcaagcagttgttaaa
gatgagatccctgacacttgggatgatgatgatgacgatgatgctgatgatgacgtcatt
gaccatcgtgatgatgatgatgatgatgatgatgatgtggagcagcagcaaatgaagggg
ggtgaagacagggagaaagacaaagatctcgagttcttactccaggaaatagccagagac
gtttcgctggatgagtcattgaagagggatctgcaaagtaaaaaaacacaccccaagtac
aaggaaatgctgatgttcagagagaagctgccatcgtacggaaagaaagaggagctggtc
cggctgatcaactccaaccaagtgctggtggtgagcggcgaaacgggctgcggaaaaacc
acccaggtgactcagttcatcctggatgaccacatcaagcgcggcatgggctcgatgtgc
cgcgtggtttgcacgcagcctcgacgcatcagcgccatctcggtagcagagcgcgtggct
gctgagagggcagagaaggttggcagtgggaattcgtgtggttaccaaattcgcttgcag
agccagttaccacggagacaaggttcggtcctgtactgtaccacgggcattattcttcag
tggcttcgctctgacccgcagttatcaagtattagccacttggttcttgatgagatccac
gagagaagcctgcactcagacgtgttgctcaccatcgtcaaggacctactcgacgtgcga
cacgacctcaaggttgttctgatgagtgccacgctcaatgcagagaaattctccaagtac
tttgacagttgccccatgattcacatcccgggcttgacattcccagtggaggagttcctg
ctcgaggacgttgtggagatgaccaggtatcgtcccaagaaccaggaccgccgacccgcc
tggaaaagaggcttctggcaggggcgccactccagacccgagaaggaggagaaggaggct
gaatacaaggagagctggccttgttatgctcgcacactgcaggccaaatactctgagagc
accatcgccgctcttgagatgctggatggcgatgacaagattgacttggacctcatcttg
gcacttatccgccatattgtgctcaacgatgaggaaggagccatcttggtcttcctgcca
ggctgggacaacatcagcagcctcaatgacttgctgatggcacaacagatgttcagatca
gatcgttttatcatcattccgctgcactcactcatgccaacggtgaatcagacgctggtg
tttaaacgtccaccacctggtgtgcggaagattgtgattgctaccaatatagcggagacg
agcatcaccattgatgatgtggtttttgtgatcgacggaggcaagatcaaggaaaccaac
tttgacaccaacaacaacatcagcaccatgacggccgagtgggtgagcctggccaacgcc
aagcagaggaaagggcgtgctggcagagtgtgcccggggaagtgctatcatctgtacaac
ggtctccgagccagccttctggatgcctaccaattaccagaaattatgaggactccgctg
gaggagctgtgcctgcagatcaagatattaaagctcggaggcatcgctcacttcctgcag
aaagctttggaccctcccactgaaaaggcagtgaatctggccataaagaacctcaaagac
ctgaacgctttggaccattcggagaacctgacggcgctgggtttccacctggctcgcctc
cccgtggaacctcacatcggaaagctcatcctgttcggagcgctgcttggctgcctcgac
cccgtacttaccatcgccgcctccctcagcttcaaagaccctttcttcatccccctgggc
aaagagcagatggcagacaagaggcgcaaagtgttgtccaggaactccaaaagtgatcac
ctcactgtggtcaatgctttccagggctggcaggaagcgaaacagcatggcggccgatac
gagcgggagttctgctgggacaacttcctgtctgctaacacactccagatgttacacaac
atgaagggtcagtttgccgaacacctcatgcacacaggcttcgtcagcagcaaggaccca
aaagaccccaactctaatgtcaactcaggtggantagataggaggagctgtcacagcaaa
aagaggcccggggtgaaagtgtacacgaagcacgacgggaaggtgtgcatccaccccaaa
tccgtcaactatgaggagaccaacttcaactacacatggctcatctatcacctcaaaatg
agaaccagcagcatcttcctgtacgactgcaccgaagtgtcacccttctcgctgctgttc
ttcggaggcgacatcaccatccagaaggacgacgaccaggagaccattgccgtggaccag
tggatcgtcttcaggtcgccggcacgcacagctcacctcgtcaagaatctaaagcgagag
ctggattctctgctggaggacaagatccgcaagccggcacctgtggactggcagaaccac
cattccaaagactgcgccgtcatcaccgccatcattgacctcatcaccacgcaggagatg
accgcaacagcggcggggcctgagggtggcgccagaggccacgaccgaacgtgggccccc
agaggacaacacatttacttcaatgacgatggcgatgatgacgacaattag
DBGET
integrated database retrieval system
