Hippocampus comes (tiger tail seahorse): 109518828
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Entry
109518828 CDS
T04969
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1 isoform X1
KO
K05635
laminin, gamma 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04510
Focal adhesion
hcq04512
ECM-receptor interaction
hcq04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109518828 (lamc1)
04518 Integrin signaling
109518828 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109518828 (lamc1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
EGF_Teneurin
Death
GldD_lipo
Motif
Other DBs
NCBI-GeneID:
109518828
NCBI-ProteinID:
XP_019730475
LinkDB
All DBs
Position
Unknown
AA seq
1601 aa
AA seq
DB search
MAAPSPRLYPLAVVALAAALTLGVGAAMDECTDDQGQAQRCMPEFVNAAFNVTVVATNTC
GSPPEEYCVQTGATGVTKSCHICDARDPRNQHGAAYLTDYNNQQDTTWWQSQTMLAGVQY
PNAINLTLHLGKAFDITYVRLKFHTSRPESFVIYKRGSEDGAWTPYTYYSGSCEKTYGLG
NRDFIRTGEDERRALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDHSPILQDWVTATDI
RVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKDTRGRLVCNCKH
NTEGADCQSCKAFYNDRPWRRATADNANECLPCECSGKSSECYFDAELYRATGHGGHCKN
CADNTDGPRCERCLDHHYRRDDAHHRCLPCACNSVGSESPQCDNRGVCACKPGVTGEKCD
RCQPGFHSLTEAGCRPCSCSPSGSTQECDVNTGQCRCKENVEGFTCDRCKPGFFNMDASS
AEGCSPCFCFLHSSVCESAPGFSIHMLSSNFERDEDQWTGQQRDASSVPVQWSPSSQDIS
LVSQDYFPMYFVAPDKFLGDQLLSFGQNLSLSFRVDRRDSRLSAEDLVLEGAGLRAAVPL
IAQGNAYPADEKQRYVFRLHNSADYPWRPAISHSDFQKLLHNLTAIKIRGTYSEKSAGYL
DDVSLVTARHGPGTPARWVEQCTCPLGYEGRRCERCAPGYRRAHPLLGAFSACEACNCNG
HSDACDPSTGACNCQHNTGGLSCERCRDGFYGDATRGTSSDCQPCPCPAGATCASVPKSG
QVVCTNCPAGTTGKRCELCDDGFFGDPLGEGGPVRACRACKCSDNIDPNAVGNCDRETGE
CLKCIYNTAGFFCDRCKDGFYGNPLAANPADKCKACACSPLGTVGAQKSCSAVTGQCPCL
PNVIERDCSACQPGFFNLRSRNGCERCNCDAIGSANGQCDIVSGQCECQPGVTGPRCEQC
EVNFFGFSSSGCKPCDCDPEGAQSGQCREDGRCHCRPGFVGARCDMCEENYFYNRSAPGC
QQCPSCYSLVRDKVNQQRQKIHELQTLIDNLASGQETVSDKAFEDRLKEAERAVLDLLDE
ARASKDVDRALLERLNTINGSLTTQWNRLQNVRGTVEQTGAQADRARNRVRQAENLIDRA
RQELDKAKDAIAKVDIKSPSGDGDPNNMTLLAEEARKLANKHKMDADQIEKIAKDANDTS
TKAYNLLLKTLDGEGKTAQQIDELNRKYKEALELAKSLEKQANKVQAEAEEAGNHAIKIF
ANLTGLPPFHTHALEEEANKIKKEASDLDGLIDKAVKEYNDLREDLAPKEREVQKLLEKG
RSEQQTADQLLARADAAKATAEEAAKKAQSTFREAENILDDLRDFDRRVNDNKTAAEEAL
KRIPAINATVAAANAKTRQAEAALGNADADARQAKTKAEEAERIATNVQKGSAKTKEDAE
KALQDADKLDSEVNSLMDELSNAEEQLSRKKAEADQDMMMAAMASTNAKEAEDNARKAKS
AVKTVLSTIAALLEQLGNIDKVDVSKLTQIEESLRRAKDKMADSELDRKLTELNDVARTQ
EAMIGDYDRQIREIRADIANLNDIKNTLPDGCFNTPSLEKP
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccttccccgcggttgtaccccttggcggtggtcgccctggcggccgcattg
acgctcggcgtcggcgccgctatggacgagtgcacggatgatcaagggcaagcgcaacgc
tgtatgccggagttcgtaaacgccgcgttcaacgtgacggtggtggccaccaacacgtgc
ggcagccccccggaggagtactgcgtccagacgggggccaccggggtcaccaagtcgtgt
cacatctgcgacgcccgcgacccgcgtaaccaacacggcgccgcctacctcaccgactac
aacaaccaacaggacaccacctggtggcagagccagaccatgctggccggggtgcagtac
cccaacgccatcaacctcacactgcacctcggaaaggcctttgacatcacgtatgtgcgc
ctgaagttccacacgagccgtcccgagagctttgtcatctacaagcgcggcagtgaggat
ggcgcatggacgccgtacacttactacagtggctcgtgcgaaaagacgtatggcttgggc
aaccgcgatttcatccggaccggcgaggacgagcggcgagcgctctgcaccgacgacttc
agtgacatctcgccgctcactggcggcaatgtggccttctccacgctggagggccgaccc
agcgcctacaactttgaccacagtcccatcctccaggactgggtgacagccaccgacatc
cgcgtgaccttgaaccgcctcaacacgtttggcgacgaagtcttcaacgaccccaaagtg
ctcaagtcctactactacgccatctccgatttcgccgtgggcggaaggtgtaagtgcaat
ggccacgccagtgagtgcgtgaaggacactcgaggtcgtctggtgtgtaactgcaaacac
aacacggaaggagcggactgtcaatcctgcaaagccttctacaacgaccggccgtggagg
cgggccaccgccgataatgccaacgagtgtctaccgtgcgaatgcagcgggaagagttcc
gagtgctactttgacgccgagctgtaccgggccacgggtcacggaggtcactgcaagaac
tgcgccgacaacacggacgggcccaggtgcgagcgttgcctggaccaccattacagacgc
gatgacgcccaccaccgctgcctgccctgcgcctgtaactctgttggttcggagtctccc
cagtgtgacaaccgaggcgtgtgtgcgtgcaaaccaggagtgacgggagagaagtgtgac
cgctgtcagcctggatttcacagtctcactgaggctggatgcaggccgtgttcttgctcg
ccatcaggaagcactcaggaatgtgacgtcaacacgggacaatgtcgctgcaaggaaaac
gtggaagggttcacctgtgaccggtgtaagccaggcttcttcaacatggacgccagcagc
gccgaaggctgctctccgtgtttttgcttccttcactcgtccgtgtgtgagagcgcgccc
ggcttcagcatccacatgctgagctccaacttcgagcgagatgaagatcagtggacgggc
cagcagcgcgatgcgtccagcgtgccggtgcaatggtcgcccagcagtcaggacatttcc
ttggtctcccaggactacttccccatgtacttcgtggctccagacaagttcttgggcgac
cagctgctgagctttggtcaaaacctgagtctgagtttccgggtggaccgccgcgacagc
cgcctgtccgccgaagacctggtcctggaaggcgccggacttcgggcggctgtgcctctc
atcgcccagggcaacgcctaccccgccgatgaaaagcaacgctacgtcttcagactccac
aacagcgccgactacccttggaggccagccattagccattcagacttccagaagctcctc
cataacctgacggccatcaagatccgcggcacttacagcgagaagagtgctggttacctg
gacgacgtgtcactggtgacggcccggcacggtccggggacgccagcccgctgggtggag
cagtgcacgtgccctctaggctacgagggccggcgctgcgagcgctgtgcgccgggctac
cgccgtgcccacccactactcggggccttcagcgcctgcgaagcctgcaactgcaatggc
cacagcgatgcctgcgacccgagcacaggcgcatgcaactgtcaacacaacacggggggc
ctgagctgcgagcgctgccgggacggtttctatggcgacgctaccagggggacatcctcg
gactgccagccgtgcccatgtcccgcaggcgctacctgcgcctcggtacccaagagcgga
caagtggtctgcaccaactgtcccgctggcaccacaggcaagcggtgtgagctatgcgat
gacggtttcttcggggacccgctgggtgagggcggtccggtgcgcgcatgccgcgcatgc
aagtgcagcgacaacatcgaccccaacgccgtcggcaattgcgaccgcgagacgggcgag
tgcctgaagtgcatctacaacacggctggcttcttctgcgaccgatgcaaggacggtttc
tacggcaacccccttgccgccaaccccgctgacaagtgcaaggcgtgcgcatgttccccg
ttgggcacggtgggcgcccagaagagctgctcggcagtgacgggccaatgcccgtgcttg
cccaacgtcatcgagcgagactgcagcgcctgccagccgggattcttcaacctgcgcagc
cgaaacggatgtgagcggtgcaactgcgacgccatcggctcggccaacggccagtgcgac
attgtcagcgggcagtgcgagtgccaaccgggtgtcacgggcccccgatgcgagcagtgc
gaggtcaacttctttggcttcagttcgtccggatgcaaaccctgcgactgcgaccccgag
ggagcacagtcgggacagtgccgggaggacggccgctgccactgccgacccggctttgtg
ggtgcccgctgcgacatgtgtgaggagaactacttctacaaccgctcggcgcctggatgc
cagcagtgtccttcctgctacagtctcgtacgggacaaggtgaaccagcagcgccagaaa
atccacgagctccagaccctcatcgacaacctggcatccggtcaggagacggtcagcgac
aaggctttcgaagaccgcctgaaggaggccgagcgtgcagtcctcgacctcctggacgag
gcgcgcgctagcaaggacgtggaccgagctctgctggagcgtctgaacaccatcaacggc
tcgctgacgacgcagtggaaccgtctgcagaatgtgcgcggtacggtggagcagacgggc
gcgcaggcggaccgtgcgcgcaaccgagtgcgccaggccgagaacctcatcgaccgcgcc
cgacaggagctggacaaagccaaggacgccatcgccaaagtggacatcaaatctccaagt
ggcgatggcgatcccaacaatatgacgctgctggccgaagaagcgcgcaaactggccaac
aagcacaagatggacgccgaccagattgagaagattgccaaggatgccaatgacacatcc
accaaagcttacaatctgctcctcaagacgctggacggagaaggaaagaccgctcaacag
atagacgagctcaacaggaaatacaaggaggcgctggagctggccaagagtttggagaag
caagccaacaaagtccaagcagaggcggaagaggccggaaaccacgccatcaagattttc
gccaacctcaccggcctgccgcccttccacacgcacgccctggaggaggaggccaacaag
atcaaaaaagaggcatccgacttggacggcctgatagacaaggcggtgaaggagtacaat
gacctaagggaggacctggcgcctaaagagcgggaagtccaaaagcttcttgagaaaggt
cgcagtgagcagcagacggctgaccagctcctggcccgcgccgacgccgccaaggcgacg
gcggaggaagcggccaagaaggcccagtccaccttccgcgaggctgagaacatcctcgat
gacctgcgagactttgaccgtcgcgtcaacgacaataagacggcagcagaggaggcactg
aagaggatcccagccatcaacgccaccgtggctgctgccaatgccaagacgcggcaggcc
gaggcagcgttgggaaatgcggacgccgatgccagacaggccaagaccaaggcggaggag
gccgagcgcatcgccaccaacgtgcagaagggctcggccaagactaaggaggatgccgag
aaggccttgcaggatgctgacaaactggacagcgaagtcaactccctgatggatgagctg
agcaatgccgaggagcagctgagcaggaagaaggctgaggcggaccaggacatgatgatg
gccgccatggcgtcgaccaatgccaaggaagcagaagacaacgcccgcaaggccaaaagc
gccgtcaagacagtcctcagcaccatcgccgccctgctggagcaactaggcaacatcgac
aaagtggacgtgagcaaactgacccaaatcgaagagtcgctgcgccgtgccaaggacaag
atggccgacagcgagctggacaggaagttgactgagctcaacgacgtggcgcgcacgcag
gaggccatgatcggcgactacgaccggcagatccgagagatccgcgccgacatcgccaac
ctcaacgacatcaagaacacgctgcctgacggatgcttcaacacgccgtccctggagaag
ccctaa
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