Hippocampus comes (tiger tail seahorse): 109518894
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Entry
109518894 CDS
T04969
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109518894 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109518894 (wdr33)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109518894 (wdr33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
ASA1
Beta-prop_Aladin
Beta-prop_TEP1_2nd
DSE1_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_WDR75_1st
eIF2A
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_SPT8
PEP5_VPS11_N
Ge1_WD40
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
109518894
NCBI-ProteinID:
XP_019730596
UniProt:
A0A3Q2XZ46
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MATDVSSPQRFFHMPRFQHQAPRQVFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLQNRQWQRDHRDLRAIQPDAGCYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAVREASFSPTDSKFATCSDDGTVRIWDFQRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNSNG
NWLLTASRDHLCKLFDIRNLKDELQVFRGHKKEATAVAWHPIHEGLFASGGSDGSLLFWN
AGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDMEPNSMAAIPGMGIPEQLKIAMEQEQSHKEAGPEEMSIPGLDWGMEEV
MGKDNKRVPQKKVPYAKPIPAQFQQAWAENKVPSMPPSGDGPKERKVEPKVDGKKKSQVE
LEQEMAALQYTNPKLLEQMKMERINQKSSDGPQQGPCPMPPFSGPAGQQNFAPPQSNNMG
PPPLGPSFMSPAQMGASSGHGQGMMGPPDMQRHPATSRNMSTQGPHNMGPGARGMPGPHG
GMMGPPARGMGPRDLQGPLPQGGMMQPPSQGNMMGPQGGMMGHPSRTHNNFGMGGMHGPL
PSNMQAPPYMQHQAPTSGPPMHGRGQQGPNNKDPRGPAPNHHMGPSDRQGAVGHEHFWGD
GQHKPQDFDGGQDFHGRGEEAWRPGPVFPGAAGHRVGAGPRGGVVVAANWGPDDRPPRDT
GDFRGRRDDRFRGGPGRPGGRVYPEEYGAQEEGFDAPEDLRGWPRGGPPPRGSHDGYRDG
PPIHDGASAAGRERSMSLQGMDMASLPPRKRPWQDGPGTADLRERDGPGLDAGRPQRDDG
YGPPVRGARGGWGPSLRRGGPPMRSAPRGRGR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgacgtgagctcgccgcagcgcttcttccacatgccgcgcttccagcaccaa
gcgccgcggcaggtgttctacaagcggcccgacttcgctcagcagcaggctatgcagcag
ctcaccttcgacggcaagcgcatgcgcaaggcagtcaaccgcaagaccatcgattataac
ccctctgtcatcagatacctgcagaatcgtcagtggcaacgagaccatcgcgacctgcga
gccatccaacccgatgccggatgctacaatgacttggtcccccctatcggaatgctgaac
aatcccatgaatgccgtcaccaccaaatttgtgcgcacatccaccaacaaagtcaaatgc
cccgtctttgtcatccggtggactcctgaggggcgtcggctggtgacgggagcgtccagt
ggggagttcacgttgtggaacggactgacgttcaactttgagaccattctccaggcccac
gacagtccggtgcgcgccatgacgtggtcccacaacgacatgtggatgctaacggcggac
cacggcggctacgtcaagtactggcagtccaacatgaacaacgttaagatgttccaggcg
cacaaggaggccgtgagagaagccagtttctcgcctactgatagtaagtttgccacctgc
tcggacgatggcaccgttaggatttgggacttccagcgatgccatgaggagcgtatcctt
cgaggtcacggtgctgatgtgaagtgcgtggactggcaccccactaaaggtctggtggtg
tccggcagtaaagacagtcagcagccaatcaaattctgggacccaaagaccggacagagt
ctggcaaccctccacgcccacaagaacacggtgatggaggtgaagtggaacagtaacggc
aactggttgctgacggcgtcgcgcgaccacctctgcaaactatttgacatccgcaacctg
aaggacgagctgcaggtgttccgaggacataagaaggaagccaccgccgtggcctggcat
cccatccacgaagggctgtttgccagcggaggttccgatggttctttgcttttctggaac
gcgggggtggagaaggaagtgggaggcatggagatggcgcacgaggggatgatttggagt
ttggcctggcacccactcggtcacatcctctgttcgggatccaatgaccacaccagcaaa
ttctggaccaggaatcgtcctggcgacaaaatgagggaccgctacaacctcaatcttcta
cctggcatgtcggaggacggtgtggagtacgatgacatggagccaaacagcatggccgcc
atccctggaatgggaattcccgagcagctgaagatcgccatggagcaggagcagagtcac
aaggaggcggggccggaggaaatgtccatccccggacttgactggggtatggaggaggtg
atgggcaaggacaacaaaagggtcccgcagaagaaagtcccctacgccaaacccatccca
gcacagttccagcaggcctgggcggaaaataaagttccttccatgcccccttctggggac
ggccccaaagaacgcaaggtggagcccaaagtggacggcaagaagaaaagtcaggtggag
ctggagcaagaaatggcggcgctgcagtatactaaccccaagctgctggagcagatgaag
atggagcgcattaaccagaagagctcggacggcccccagcagggaccgtgccccatgccc
cccttctcaggccccgccgggcagcagaactttgctcctccgcagtccaacaacatgggc
cccccacctttagggccctctttcatgtctcccgctcagatgggtgcttcgtctgggcac
gggcagggcatgatgggcccgccggacatgcagagacaccccgccacttccaggaacatg
agcactcaaggacctcacaacatggggcccggagccagaggaatgccaggccctcacggg
ggcatgatggggccccccgctagagggatggggccacgggacctgcagggccctctgcct
cagggaggcatgatgcagccgccatctcaaggaaacatgatgggacctcagggggggatg
atgggacacccatccaggacacataataactttgggatgggggggatgcacggacctctg
ccaagtaacatgcaggcgcccccctacatgcagcaccaggctccgacttcggggcccccc
atgcacgggaggggtcagcagggccccaacaacaaagacccccgggggccggcccccaac
caccacatgggaccttcggatcgccaaggtgcagtagggcacgagcacttctggggggat
ggacagcataaaccgcaggactttgacgggggccaggacttccacggccgaggggaggag
gcctggagacctggacctgtctttccgggggcggcgggtcatcgagtcggggcgggtccc
cgaggaggcgtggtggtggcggccaactggggtcccgatgaccggcccccccgagacacg
ggagacttcagaggccggcgagatgacaggttcaggggaggtccgggacggcccggaggt
cgagtctaccctgaagagtatggagcccaggaggagggctttgacgcccccgaagacctg
aggggctggcccagaggtgggcccccacctcgaggaagtcatgacggctaccgtgatgga
cccccaatacacgatggcgcgtccgcggcaggccgtgagcggtcgatgtctctgcagggg
atggacatggcgtcgctgccaccacggaaaagaccctggcaggacggcccaggaacggct
gacctcagagaacgagatggaccgggcttagacgcaggtcgacctcagcgggacgatggc
tacggcccgcctgtgcggggagcgcggggcggctgggggcccagtctcagaagaggaggg
ccccccatgcgcagcgcgccaaggggccgcggccgctag
DBGET
integrated database retrieval system
