KEGG   Hippocampus comes (tiger tail seahorse): 109518906
Entry
109518906         CDS       T04969                                 
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
  KO
K14409  protein SMG7
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109518906 (smg7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcq03019]
    109518906 (smg7)
Messenger RNA biogenesis [BR:hcq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     109518906 (smg7)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109518906 (smg7)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 TPR_2
Other DBs
NCBI-GeneID: 109518906
NCBI-ProteinID: XP_019730624
LinkDB
Position
Unknown
AA seq 1147 aa
MSLCAHFLRRQAEALKADMTDSKLAAAEAWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCSVFNVDLPCR
VKSSRLGIISNGPNSGGGGIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAA
QLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRED
SRGKWSVSDFVKAFIKFHGHVYLSKGVEQLDALRERLEEQFHRLIHQKAFSSQQLVHMTV
INLFELHHLREIAADGQQTVSWFQLLGLFMSFLGLMCSRVLLNKNRDEEEVAGECPLPAI
KVSLDWLRLKPSVFHEAAVDQRQHVWPWLVSILNSFQPKDQHVSASSVTPLPEEFELQGF
LALRPALRAVDFTKGHQGVPVDRDVLLLRTRHQRLIALGKWIADNQPGLIQCRAGEDGLL
LFLSDIPEQAIEEPAEKEPCVLQEASNGERALGEGANAGLKSVLSAGKAGNSWADGAERP
VVTFKENIKPRELSREPARGTHQKDGGKERRDLVKGNGLAAAGVVAKTELKRDGKRKCET
KKAAQEKVPEAGKQVKAQTELRKTPVSEAKKTPATQTQAATCSSQFIPIHHPGAFPPLPS
RPGFPPFVIPPPVAFPGLQVNPGFAFSAGVSVPGPFLQPAAHAQAGPQAANGGKQSHIPY
SQQRPSGPGSSGPGQQQPHALSHPQLQVTSPTKPVQQVAMAKSPPHLQQAFVQDAQLWNP
SQAALQKLPPSVQMSLKPQTFYLTPQDAVKVYEQQMAPPPPPHASAVDKKMKFPPYWDAP
SFRLPDDRMKRPPPPEQDAVATTGPRGTPFEGTSRSPLLPPDLLKSLAADVEDEDELLFS
KPPNFFRALSAPLSSLPGPNLFLPNHSRQTDGGLEALGQSSSLLPTQEYNQNSIFSQAYG
KNLPSNSKCDAPMMHQETSLYSLFEWTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPP
THTHNHAAATAAAPFSNFGPIGTPDSRERRALDRWKPDKTGGVSGFGLEYLPATTSDASW
HQAPASGSSWTNQESPMEESSSNMLLDSFKSIWSSSMMQPGPSALEQLLQQQKQKQQRGH
GTMNPPH
NT seq 3444 nt   +upstreamnt  +downstreamnt
atgagcctctgcgcgcactttttacgcagacaggcagaggccctgaaggcggacatgaca
gactctaagctggcggcggctgaggcgtggacgtcccgccaggccttgcaggacttgtac
cagaaaatgctggtcacggacctggagtacgccttggacaagaaggtggagcaggacctg
tggaaccacgccttcaagaaccagatcaccaccttgcaaagccaagccaagaaccgggcc
aaccccaatcggagtgaggtgcaggccaatctgtccttgttcctggaggcggccagcggc
ttctacactcagctgttacaggagctttgcagcgtctttaacgttgacctgccgtgtcgc
gtcaagtcttcgcggctgggcatcatcagcaatggaccgaacagcggcggcggcggcatc
gtgacgccgcagcccagctcgtgctcatacatctgccagcactgcctggtgcacctgggc
gacattgctcgctaccgcaaccagaccagccaggccgagtcatactaccggcacgccgct
cagttggttccatccaatggtcagccgtacaaccagctggccatcctagcgtcttcgaaa
ggagaccatctgaccaccatcttctactactgccgcagcatcgccgtcaagttccccttc
cccgcggcctccaccaacctgcagaaggcgctgtccaaagctctggagagccgcgaggac
tcgagaggcaagtggagcgtgtctgactttgtcaaggcctttatcaagttccacggacac
gtgtacctgagcaagggtgtggagcagctggacgctctgagggaacgtctggaggagcaa
ttccacaggctgatccaccagaaggccttcagctcgcagcagctggtccacatgacggtc
atcaacctgtttgagctgcatcacctgcgagaaatcgcggccgacggccagcagacagtc
agctggttccagctactcgggcttttcatgtccttcctgggcctcatgtgcagccgagtt
ctgctcaacaagaaccgcgatgaggaggaggttgccggtgagtgtcctttgccggccatc
aaggtttctctggactggctccgcctgaagcccagcgtgttccacgaggccgctgtcgac
cagaggcagcatgtctggccctggctggtgtccatcctcaacagcttccagcccaaagac
cagcacgtgtccgcatcctcagtgacgccactgccggaggagtttgagcttcaaggcttc
ctggctctgcggccggctctcagggcagtggactttaccaaaggtcaccagggcgttccg
gtggaccgcgacgtgcttctgctgcgcacgcgtcaccagagactgatcgcgctgggaaag
tggatcgctgacaaccagccggggctcatccaatgtcgtgccggcgaggacggcctgctc
ctcttcctcagcgacattcccgagcaggccatcgaagagccggcggagaaggagccgtgc
gtgctgcaggaggcgtccaacggcgagcgggcactgggggaaggcgccaacgccggcctc
aagtcggtcctgtcggcgggaaaagctggtaactcatgggcggacggtgccgagcggccc
gtcgtcaccttcaaggaaaacatcaaaccgcgcgagctgagccgggagcccgcccgtgga
actcatcagaaggatggcggcaaggagcggcgagacttggtcaaaggaaacggtctggca
gcggcgggggtggtggcgaaaactgagctgaagcgtgatggcaaaaggaagtgcgagacc
aaaaaagctgctcaggagaaagttcccgaggctgggaaacaggtgaaagctcaaacagaa
cttaggaagactccagtttcggaggccaagaagactccggctactcaaacgcaagcagcc
acgtgctcttcccagttcatcccaatccatcaccctggagcctttccacctctgccgagt
cgccctggctttccgcccttcgtcatccctcccccggtggcattcccgggcctgcaggtg
aatccgggcttcgccttctccgccggcgtgtctgtgccgggccccttcctgcagccggcc
gcgcacgcgcaggcgggcccgcaggcggccaacgggggcaagcagtcccacatcccttac
agtcagcagaggccgtccgggcccggctcctcggggcccggccagcagcagccccacgcc
ctctcccacccccagctgcaggtcacgtcgcccaccaagcccgtccagcaggttgcaatg
gccaagagtccgccccacctgcagcaggcgtttgtccaggacgcgcagctatggaatccg
agtcaggcggcgctacagaagcttccgccgtccgttcagatgtcgctgaagccgcagacc
ttctacttgacgcctcaggatgccgtcaaagtgtacgaacagcagatggcgccgccaccg
ccgccgcacgcctccgctgtggacaagaagatgaagttcccgccctactgggatgccccc
tccttcaggctgcccgatgacaggatgaagcggcccccacctcccgaacaggacgccgtc
gccaccactgggcccagaggaaccccctttgaggggacctcgcgctcgcctcttcttcct
cccgaccttttgaaatctctggccgccgatgtggaggacgaggacgagctgctcttttct
aagcctcccaatttcttccgggctctgtccgctcctcttagctcgcttcccggacccaac
ttgtttctgcccaatcacagcagacagacggacggcggcctcgaggcgctcggccagtcg
tcttccctcttgcccacgcaggagtataaccagaacagcatcttcagtcaagcctacggg
aagaacttgccgtcaaactccaagtgtgacgctcccatgatgcaccaggagacatcgctg
tactctttgttcgagtggacgccatggtcgccctcgctgcccgccagctcagatcactct
accccggccagccaatcccctcactcatccaaccccagcagcctgccgtcctccccgccc
acccacacccacaaccacgcggcggccactgccgccgcgcccttctccaactttgggccc
atcggcacaccggacagtcgcgagcgcagagcgcttgaccgctggaagcccgacaagaca
ggtggcgtgagcggctttgggttggagtacctgccggccaccacttcggacgccagctgg
caccaagcccccgccagcggcagctcctggaccaatcaggagtctccgatggaagagtcg
tcctccaacatgctgctggacagcttcaagtcgatctggtcgagctcgatgatgcagcct
ggcccgtcggcgctggagcagcttctgcagcagcagaagcagaaacaacagcgaggacac
ggcaccatgaacccaccgcactga

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