Hippocampus comes (tiger tail seahorse): 109518906
Help
Entry
109518906 CDS
T04969
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109518906 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109518906 (smg7)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
109518906 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
109518906 (smg7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
109518906
NCBI-ProteinID:
XP_019730624
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MSLCAHFLRRQAEALKADMTDSKLAAAEAWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCSVFNVDLPCR
VKSSRLGIISNGPNSGGGGIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAA
QLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRED
SRGKWSVSDFVKAFIKFHGHVYLSKGVEQLDALRERLEEQFHRLIHQKAFSSQQLVHMTV
INLFELHHLREIAADGQQTVSWFQLLGLFMSFLGLMCSRVLLNKNRDEEEVAGECPLPAI
KVSLDWLRLKPSVFHEAAVDQRQHVWPWLVSILNSFQPKDQHVSASSVTPLPEEFELQGF
LALRPALRAVDFTKGHQGVPVDRDVLLLRTRHQRLIALGKWIADNQPGLIQCRAGEDGLL
LFLSDIPEQAIEEPAEKEPCVLQEASNGERALGEGANAGLKSVLSAGKAGNSWADGAERP
VVTFKENIKPRELSREPARGTHQKDGGKERRDLVKGNGLAAAGVVAKTELKRDGKRKCET
KKAAQEKVPEAGKQVKAQTELRKTPVSEAKKTPATQTQAATCSSQFIPIHHPGAFPPLPS
RPGFPPFVIPPPVAFPGLQVNPGFAFSAGVSVPGPFLQPAAHAQAGPQAANGGKQSHIPY
SQQRPSGPGSSGPGQQQPHALSHPQLQVTSPTKPVQQVAMAKSPPHLQQAFVQDAQLWNP
SQAALQKLPPSVQMSLKPQTFYLTPQDAVKVYEQQMAPPPPPHASAVDKKMKFPPYWDAP
SFRLPDDRMKRPPPPEQDAVATTGPRGTPFEGTSRSPLLPPDLLKSLAADVEDEDELLFS
KPPNFFRALSAPLSSLPGPNLFLPNHSRQTDGGLEALGQSSSLLPTQEYNQNSIFSQAYG
KNLPSNSKCDAPMMHQETSLYSLFEWTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPP
THTHNHAAATAAAPFSNFGPIGTPDSRERRALDRWKPDKTGGVSGFGLEYLPATTSDASW
HQAPASGSSWTNQESPMEESSSNMLLDSFKSIWSSSMMQPGPSALEQLLQQQKQKQQRGH
GTMNPPH
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctgcgcgcactttttacgcagacaggcagaggccctgaaggcggacatgaca
gactctaagctggcggcggctgaggcgtggacgtcccgccaggccttgcaggacttgtac
cagaaaatgctggtcacggacctggagtacgccttggacaagaaggtggagcaggacctg
tggaaccacgccttcaagaaccagatcaccaccttgcaaagccaagccaagaaccgggcc
aaccccaatcggagtgaggtgcaggccaatctgtccttgttcctggaggcggccagcggc
ttctacactcagctgttacaggagctttgcagcgtctttaacgttgacctgccgtgtcgc
gtcaagtcttcgcggctgggcatcatcagcaatggaccgaacagcggcggcggcggcatc
gtgacgccgcagcccagctcgtgctcatacatctgccagcactgcctggtgcacctgggc
gacattgctcgctaccgcaaccagaccagccaggccgagtcatactaccggcacgccgct
cagttggttccatccaatggtcagccgtacaaccagctggccatcctagcgtcttcgaaa
ggagaccatctgaccaccatcttctactactgccgcagcatcgccgtcaagttccccttc
cccgcggcctccaccaacctgcagaaggcgctgtccaaagctctggagagccgcgaggac
tcgagaggcaagtggagcgtgtctgactttgtcaaggcctttatcaagttccacggacac
gtgtacctgagcaagggtgtggagcagctggacgctctgagggaacgtctggaggagcaa
ttccacaggctgatccaccagaaggccttcagctcgcagcagctggtccacatgacggtc
atcaacctgtttgagctgcatcacctgcgagaaatcgcggccgacggccagcagacagtc
agctggttccagctactcgggcttttcatgtccttcctgggcctcatgtgcagccgagtt
ctgctcaacaagaaccgcgatgaggaggaggttgccggtgagtgtcctttgccggccatc
aaggtttctctggactggctccgcctgaagcccagcgtgttccacgaggccgctgtcgac
cagaggcagcatgtctggccctggctggtgtccatcctcaacagcttccagcccaaagac
cagcacgtgtccgcatcctcagtgacgccactgccggaggagtttgagcttcaaggcttc
ctggctctgcggccggctctcagggcagtggactttaccaaaggtcaccagggcgttccg
gtggaccgcgacgtgcttctgctgcgcacgcgtcaccagagactgatcgcgctgggaaag
tggatcgctgacaaccagccggggctcatccaatgtcgtgccggcgaggacggcctgctc
ctcttcctcagcgacattcccgagcaggccatcgaagagccggcggagaaggagccgtgc
gtgctgcaggaggcgtccaacggcgagcgggcactgggggaaggcgccaacgccggcctc
aagtcggtcctgtcggcgggaaaagctggtaactcatgggcggacggtgccgagcggccc
gtcgtcaccttcaaggaaaacatcaaaccgcgcgagctgagccgggagcccgcccgtgga
actcatcagaaggatggcggcaaggagcggcgagacttggtcaaaggaaacggtctggca
gcggcgggggtggtggcgaaaactgagctgaagcgtgatggcaaaaggaagtgcgagacc
aaaaaagctgctcaggagaaagttcccgaggctgggaaacaggtgaaagctcaaacagaa
cttaggaagactccagtttcggaggccaagaagactccggctactcaaacgcaagcagcc
acgtgctcttcccagttcatcccaatccatcaccctggagcctttccacctctgccgagt
cgccctggctttccgcccttcgtcatccctcccccggtggcattcccgggcctgcaggtg
aatccgggcttcgccttctccgccggcgtgtctgtgccgggccccttcctgcagccggcc
gcgcacgcgcaggcgggcccgcaggcggccaacgggggcaagcagtcccacatcccttac
agtcagcagaggccgtccgggcccggctcctcggggcccggccagcagcagccccacgcc
ctctcccacccccagctgcaggtcacgtcgcccaccaagcccgtccagcaggttgcaatg
gccaagagtccgccccacctgcagcaggcgtttgtccaggacgcgcagctatggaatccg
agtcaggcggcgctacagaagcttccgccgtccgttcagatgtcgctgaagccgcagacc
ttctacttgacgcctcaggatgccgtcaaagtgtacgaacagcagatggcgccgccaccg
ccgccgcacgcctccgctgtggacaagaagatgaagttcccgccctactgggatgccccc
tccttcaggctgcccgatgacaggatgaagcggcccccacctcccgaacaggacgccgtc
gccaccactgggcccagaggaaccccctttgaggggacctcgcgctcgcctcttcttcct
cccgaccttttgaaatctctggccgccgatgtggaggacgaggacgagctgctcttttct
aagcctcccaatttcttccgggctctgtccgctcctcttagctcgcttcccggacccaac
ttgtttctgcccaatcacagcagacagacggacggcggcctcgaggcgctcggccagtcg
tcttccctcttgcccacgcaggagtataaccagaacagcatcttcagtcaagcctacggg
aagaacttgccgtcaaactccaagtgtgacgctcccatgatgcaccaggagacatcgctg
tactctttgttcgagtggacgccatggtcgccctcgctgcccgccagctcagatcactct
accccggccagccaatcccctcactcatccaaccccagcagcctgccgtcctccccgccc
acccacacccacaaccacgcggcggccactgccgccgcgcccttctccaactttgggccc
atcggcacaccggacagtcgcgagcgcagagcgcttgaccgctggaagcccgacaagaca
ggtggcgtgagcggctttgggttggagtacctgccggccaccacttcggacgccagctgg
caccaagcccccgccagcggcagctcctggaccaatcaggagtctccgatggaagagtcg
tcctccaacatgctgctggacagcttcaagtcgatctggtcgagctcgatgatgcagcct
ggcccgtcggcgctggagcagcttctgcagcagcagaagcagaaacaacagcgaggacac
ggcaccatgaacccaccgcactga
DBGET
integrated database retrieval system