Hippocampus comes (tiger tail seahorse): 109519073
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Entry
109519073 CDS
T04969
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109519073 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109519073 (rubcn)
Membrane trafficking [BR:
hcq04131
]
Autophagy
Other autophagy associated proteins
Others
109519073 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
CMD
Motif
Other DBs
NCBI-GeneID:
109519073
NCBI-ProteinID:
XP_019730939
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MTFSNSSYLSALDSSQDMEITSEGEAAERRRELWKLLSSLKTTVEGLLSTNNPNVWSRYG
GLQRLHKDMNNILSHGLKNEQVYYKQRDYWPFVWCVRHISPHLASHVEQFSQLEPVLSSR
VQSAGESYKAERWLLYSLQVHMLSAQLKPLLRRQGHAIKYYNEDSFLLSESHVNAMFQCL
EAVEQNNPKLLAQIDTVGLSPLKNPPCLGLLKSQSLCVLPGAGGPWRSADSTPKRESLNR
RLTTSNCSLRDVAATNTSGNMIGASNSTNTTSRAGSRGPPWVCLTRPEESERGVTPPPGQ
ASVPSISLLASPSLTSPQPDTGDSGDGEYDDGPEYLAIGNLGQRSRRSTQSSTHSSELSE
SKDQSLQPNSLALPPLRRSSFSEGQRELVKGSRGHTRSFSDTGIVQKLRKGGAHRKITII
IEDPVAETGSEDRCSKEYSPFSLQPSDTSTPTSLYTDSHGSQYSRTPDGLFRKPSKGQSL
ISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKYNLRRQQEEGEEEGDSDSEIQQLK
QKIRLRRQQIRRSRLPPCTTSQHLFHSTDSSGSRRSSQDSHHGLSDSDSAEEVEECELRD
GCEGQSLLAVSQNGLSLSLASLFSEADIKRSVSSSNKSFLSSESISTSFLQSNSAESVAM
GLLRQFEGMQLPAASELDWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNL
EWAPPRPQIIFNIHPPPKRKIVVAKQNYRCAGCGTRIDPDYIKRLRYCEYLGRYFCQCCH
ENAQVVVPGRILMKWDFSKYYVSNFARDLLTKIAGDPLFNPNDINSGLYKKVKALESVRI
LRMQLFHMKTLFRTCRFSKEVLEQFDFLPCHLTEDLHLFSLNDLLSVRNGELAPRMKELL
KLGTVHVAGCVLCQAKGFVCEFCGNEKDIIFPFQLSKCQRCEGEPSLLVAGLGGLRVPPR
RSSAPVIWIDWKLSKPRRLARALSKDRREGEGGEEDLESVEEEETDSGDQEKSTDNIQAR
KAKAGLFRHFSPGKLTKAFTWHHGTEEEQEVTAGSESEKDGEKGSEERDEVFSKDRSKRE
EGEDGHAKRINLLKILRLERLKQSLSKHDRTDSDSETCSSQESSEELVGGQGRKERWFGR
LGRTFSKGDPKDGKTKATEEEKHEEPERISPEPGGSTMEVGEGKAVEESEGKAEKLAVSN
VLKQSAAFSQEPSVTDDGQVDSAPIQTNWRARKTRRARRITRGRQTCQGRDGDGGQ
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgacattcagtaattccagttatctttctgcactcgattccagccaagacatggagata
acgtctgaaggtgaggcggcggagcgcaggcgggagctctggaagttgttgtccagcctg
aagaccaccgtggagggcctcctgtccacaaacaaccccaatgtttggtcccgctatggc
ggcctgcagcgcctgcacaaggacatgaacaacattctcagtcatggactgaagaatgag
caggtgtactacaagcaaagagactactggccatttgtctggtgtgttcgtcacatcagc
cctcaccttgcctcacatgttgaacagttcagtcagctggagccggtactgagcagcagg
gtgcagagtgccggtgaaagctacaaagccgagcgctggttgctttacagcttgcaggtc
cacatgctgtcggctcagctgaaacctctgctcaggcgtcagggacacgcaataaaatac
tacaatgaagattccttcttgctcagcgaatcacacgtcaatgccatgttccagtgtctt
gaagctgtggaacaaaataaccccaaactgttggcccaaatagacacagtggggctgtcc
cctctcaagaaccctccgtgcctcggcctgttgaagagccagagcctgtgtgtgttgccc
ggcgctggtgggccctggagaagcgctgactcgacacccaaaagagagtctttaaaccgc
aggcttaccacatctaactgctccctcagagatgtggctgcaaccaacaccagcggcaac
atgataggagccagcaacagcacaaatactacctcacgagccggcagccgaggtcctccc
tgggtgtgtttgaccaggccggaagagagcgagcggggtgtgacaccccctcctggacaa
gcgtccgtaccctccatctctcttttagcgtctccctcgctcacctccccacaacccgac
acaggagattctggtgacggcgaatatgacgatggtccagagtacctggccatcggcaac
ctgggtcaacgcagtcgccgcagcacccaaagctccacacacagcagcgagctcagcgag
agcaaggaccaatccctgcagccgaattctctggctcttcctccactcaggcgctcgtct
ttttcagagggccagagagagctagtcaaagggtcccgaggacacacccgctcgttttct
gacaccgggattgtccaaaaactcaggaaaggaggggcccaccggaaaatcaccataata
atagaggatccggtagcagaaacagggagcgaagaccgttgcagtaaggaatacagccct
ttctcacttcagcccagtgacaccagcacgcccacttccctttacacggactctcatggg
tcccagtacagcaggacaccagatggtttgttcaggaagccatcaaaaggccagagcctc
atcagctacctgtcagagcaggactttggcagctgtgctgaccttgaaaaggagaacgct
cacttcagcatctcggagtccctgatcgcagccatcgagctgatgaagtacaacctgcgg
cgtcagcaggaggagggtgaggaagaaggagacagtgactctgagattcagcagctcaag
cagaagatccgcttgcgaaggcagcagatccgtcgcagccgcctgccgccctgcacgacc
tcacagcaccttttccattcaactgatagcagcggttcacggaggagctcccaggactcc
catcacggcctatccgattctgactctgcagaggaggtggaggaatgtgaattacgagat
ggctgtgagggtcagtccctgctggcggtgtctcagaacggcctctccttgtcacttgcc
tccctcttctcagaagcagatataaagcgcagcgtaagctccagcaacaagtcttttctg
agctcagagtccatttccacctccttccttcaatccaactcagccgagtcggtcgccatg
ggtttgctcagacagtttgaaggcatgcagctgcctgccgcctctgagcttgactggctg
gttccagaacatgacgcgccacagaaactgctgcccatcccagattctcttcccatctct
cctgatgacggagagcatgcagacatctataagctaaggattcgggtacgagggaacctg
gaatgggcgccgccccgaccacaaatcatcttcaatattcaccctccacccaagaggaag
atcgttgtggcgaaacagaattaccgctgtgccggctgcggtactcgcattgacccagac
tatattaagagactgcgttactgcgagtaccttggtcgttacttctgccagtgctgccac
gagaatgcgcaagtagtggttcccggtcgaattctgatgaagtgggatttcagcaaatac
tacgtgagcaactttgcccgtgatttgctgaccaagattgctggagaccccctcttcaac
ccaaatgatatcaacagtggcctttacaagaaagttaaggctttggaatctgtcaggatt
ttgagaatgcagctgtttcatatgaaaactctcttcaggacatgtcgcttttcaaaggag
gtacttgagcagtttgacttccttccctgtcacctgactgaggacctgcaccttttttcc
ctaaatgaccttttgtctgtgcgcaatggagaactggccccccgcatgaaggagttgcta
aaactcggcactgtgcacgtagcgggctgcgtgttgtgccaggcaaagggcttcgtgtgc
gagttctgtggcaacgagaaagacatcatcttcccctttcaactgagcaagtgccagcgc
tgcgaaggtgagccctctctgctggtagcaggcctgggcggcctacgagtgccccctcgc
cggagctcagctcccgttatctggatagactggaagctctccaaacctcgtaggctggcg
agggccctctccaaggaccggcgggagggggagggcggggaggaggatttggagtcggtt
gaggaggaggagaccgacagcggggaccaagagaagtcaacagacaatatacaggcgaga
aaggcaaaagcgggattatttcgccacttctcgcctggcaaattaacaaaagcctttacc
tggcaccacggaactgaagaggagcaggaggtgacagcagggagcgagtcagagaaggac
ggtgagaaaggaagtgaggagagagatgaggttttcagtaaagacaggtcaaagcgtgag
gaaggggaggacggtcatgcaaaaagaatcaatttacttaaaattctccgcttagagcga
ctgaagcagagcctctccaagcatgacaggacggacagtgacagtgagacgtgtagcagc
caggaaagttcagaggaactggtgggtggtcaagggaggaaagaaagatggtttggccgt
ctcggcaggaccttctctaaaggagaccccaaggacggcaaaacaaaagcaacggaggaa
gaaaaacatgaagagcctgagagaatatcgcctgagcccggaggcagcaccatggaggtg
ggagaggggaaagctgtggaggagagcgagggaaaagcggagaaattagccgtctccaac
gtcctgaaacagtcggccgccttctcccaagagccaagcgtgacggacgatgggcaagtg
gattcggctcccatccaaacgaactggcgagctcgaaagactcgtcgagcccgcagaatc
acgagaggcagacagacatgtcaagggagggacggtgatgggggccaatga
DBGET
integrated database retrieval system
