Hippocampus comes (tiger tail seahorse): 109519093
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Entry
109519093 CDS
T04969
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq02010
ABC transporters
hcq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109519093
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109519093
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcq02000
]
109519093
Transporters [BR:
hcq02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109519093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
109519093
NCBI-ProteinID:
XP_019730973
LinkDB
All DBs
Position
Unknown
AA seq
2318 aa
AA seq
DB search
MDNFQQLLLLLWKHITYRKRNKVQLIIELIWPLFIFVVLIYIRNTNLPVQQGQCHFLNKA
LPSAGTLPWIQGFFCNINNHCYSSPTLGETLGQVGNFDNSIISRVFVDAQKLLNYAANQD
KSSLNTLRTTVQSVGNKPELWPTLPIAQFLRANEAFSTYLRTKTGLSSETVEKLLMTKLN
FKPSLAGPELQLKNLLCNKDELKQFLIMDEGEDVSDLQGQLCALPDDIVQEAHRLFLSEL
DTAKLVANFKSINPMDLVALIKAITLVSQQFADIMDYFSPHSSFSDMSKELGLLSSENGA
TPRQRFQVISRIMCNRSAIGNNLIPSFNGYEDVNQSLMETNDFQDMDVSPTSQTNTFCQS
LIQSLTTSPMSRRIWRTIKPFVNGKLLYTPDTPAVQQVMKEVNKTFQDLQILKDLNEAWL
EVGPEIKKNMETRAEVPLLQGLLQLPSISTLVNKRLANTTWTAARLAHFLSSPSSDAQRR
SGGSSTWKDIYKNVNDTITYLAQVTECFFINKLEGLMSEDQLVGRALELVEDGQFWAGVV
FVPPNSSATELPSNVNYKIRMDIDDVTRTDKIKDRFWKPGPAVDPINDMQYIRGGFVYVQ
DLVEKAVSRIMTKAQQNIGLYLQQMPYPCFVDDIFLRVLNRTLPLFLTLAWICSVAVIIK
AVVYEKEARLKETMKIMGLSTGTLWLSWFISSLVPFLLSAVLLIGLLKWGEILPYSNVVV
VFFFLMAFATATIMQCFLISTFFSKANMAAACGGLIYFSLYLPYILFVAWQDRATTTIKV
FASFLSPVAFGFGCEYFSQYEEQGVGIQWSNMQSSPVEGDSYNFATSIGMLYVDAFIYAV
AAWYIEMVFPGEYGMPRPWYFLFHINYWRGIPLEDGIPIPTAPMEQGKDRIEVDPSNLVL
GVSISNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISILTGLFPPTSGTV
YINGMDIRYNIDTIRRTLGVCPQHNVLFDLLTVEEHVWFYGRLKGMSEEEVKSELDSWLE
EVGLLHKRHEQTETLSGGMKRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRSIWDLLLKY
RKDRTIILSTHYMDEAELLGDRIAIISHGRLCCCGSPLFLKSKLGSGYSLTVVKKDSNLL
QTGGTPRSCNGDAGLANVDNSSSMEALLSLAQRHFPDSRLVEESQCEAVLNLPQEASKNS
RLAVFLSELDKNLSQIGILSYGLSDSKLEDIFLRVAEETEVKAGPGLQANLPQHSQQEEE
PKIEPQEEELLSRLGQGATLTGWSLKWQQLRALFIKRWLYVRRSRRALFAQIVLPAVFVL
IALFVSRVVPQSGKYPALELQPCMYGKQYIFFSMDAPKNPPMEKLLEALLDQPGFDSKCM
ENKKSTVTHRHESKQGRVFKRPQVPDSTWQMFSTVNWTKERPSPDCQCSTEDSRRMLPDC
PEGAGGLPPPQVTLYPGVILQNLTSYNMSDYLVKTYSQILRKSLKAKKLVNELRYGGFSL
GSVRPLPQDIDVKDSVTKIKNDFSVSQNSALNKFLNKLVGFLERLDAQNNVKLWFNNKGW
HAMVSFVNVVNNGLLRGGLQHGPRRPSITAYNHPLNLSKEQLSQIAQSSSSVDIVISVCV
IFAMSFVPASFVLFLIDERASKATHLQFVSGVQPILYWVANFCWDMLNYTIPAIIVVLIF
ISFQQEAYVSATNLPALILLLLFYGWSITPLMYPASFVFTVPSTAYIVLTSVNLFIGING
SIATFVLELFADESLNELNKVLKKLLLIFPHYCLGRGLMDLAKNQAMAEVSQRLGMNQSS
DHPLQWDFVGKNLFAMATEGVVFFIFTLMLQYKFFIGHMSFRNTRLCLSCVRPWSVVSDV
LPLGPEDEDVARERKRVKRGNADSDILTMIDLTKIYKAGKKPAVSRLCLGIPRGECFGLL
GVNGAGKTTTFRMLTGDTSISFGEAFLNHHSVLRELDRVHQLMGYCPQFDAICNLLTGIE
HLELYARLRGIPEESVTEVAKLGVKKMGLSQYAKQEAGNYSGGNKRKLSTAIALIGAPPV
LFLDEPTTGMDPKAKRFMWNCILCFTKEGSAVVLTSHSMEECEALCTRMAIMVNGRFKCL
GSVQHLKNRFGDGYTIILRLADSDSNPDTCPVKNYIKNTFPMIELKEQHQNVQQYQLPAH
ACCLVQVFDVLAKYEELGISDFSVSQTTLDQVFVNFAKEQTDDDQPSNVNIDNGTVQSNL
STRRFQMFSSGVPHKTPISQQRTSACDKRSKREIKTSISQPKKKCRKSMRSSSFTGNTVG
TEEEVCQSTRSKRSSKDQNQNQNSSVFVVGTSTDDTSL
NT seq
6957 nt
NT seq
+upstream
nt +downstream
nt
atggataatttccagcagcttcttcttctgctttggaagcacatcacctaccgcaaaaga
aacaaggttcaactgattatcgagctcatctggccactcttcatctttgtcgtcctcatt
tacattcgtaacaccaatcttcctgttcagcagggtcaatgtcactttctaaacaaagcc
ttgccatcagcaggcaccttgccgtggattcaaggttttttctgcaacatcaataatcac
tgttacagcagcccaacgcttggggagactctgggccaagtgggcaactttgacaactca
ataatttctcgtgtctttgtggatgcacagaagcttttaaactacgctgcaaatcaggac
aagtcaagcctcaacacgctgcggacaaccgtccagagtgtgggaaataaacctgaactc
tggccaactctcccaatagcacagttcctaagagccaatgaggcgttttccacctacttg
cgcaccaaaaccggcctttcgtctgagactgtggaaaagctgctgatgactaaactcaat
tttaagccatcattggcaggaccggagctgcagctgaagaatctgttatgcaataaagac
gaattaaaacagtttctgattatggatgaaggggaggacgtgagtgacttgcaagggcag
ctgtgtgcgttgcctgatgacatcgttcaggaggcccatcgcctctttctctcagagctg
gacacagccaagctcgtggcaaatttcaagtctatcaatcctatggacctggtggccctc
atcaaagcaatcactttagtttcccagcagtttgcggacatcatggattatttctcgccc
cactccagcttctctgatatgagtaaggaactcggcctgttgtcttcagaaaatggggct
acacccaggcagcgtttccaggtaatctcaaggatcatgtgcaatcgctctgcgattggc
aacaacctaatcccatcattcaacgggtatgaagatgttaatcagtctttgatggagaca
aatgactttcaagacatggacgtcagccccacgagtcaaaccaatactttctgccagagc
ttgattcaaagtttaacgaccagtcccatgtcccgtcgcatttggcgaacaattaaacct
tttgtcaatggaaaactgctgtacacaccagacacgcctgcagttcaacaagttatgaaa
gaggtgaacaagacttttcaagacctgcagatcttgaaggacctgaatgaggcttggttg
gaggtggggccagaaattaaaaaaaacatggagactcgagcggaggtcccgctattgcag
gggttgctccagctgcccagtatatcgacactggtcaacaagcgactggcaaacacgaca
tggacagccgcacggttggctcatttcctgtccagtccttcatcagatgcacagaggagg
tctggaggaagttcaacatggaaggacatctacaaaaatgtcaatgataccatcacctac
cttgcacaagtcactgagtgttttttcataaacaagttggaagggttgatgagtgaagat
cagctggtcggcagggctttggagctcgttgaggatggacagttttgggcaggtgtcgtc
tttgtccctcccaattcttctgccactgaactgccatccaatgtcaactataagatccga
atggacattgatgatgttacccgcactgataagatcaaagacaggttttggaaacctggt
ccggcagttgatccaatcaacgacatgcagtacatccggggaggctttgtatatgttcag
gatttggtggagaaggccgtgtcccgtatcatgacaaaagcgcagcaaaacattggcctc
tacttacagcaaatgccatacccctgctttgtggatgatatttttctgagagtgttgaat
cgcaccctgccgcttttcctgacactggcctggatctgttctgtggcggtaatcattaag
gcggtggtatacgagaaggaagccaggctgaaagaaaccatgaaaataatgggtctgagt
acaggaacactgtggctcagctggttcatcagcagtctggtgcctttcctgctgtctgct
gtactcctcattggtctgcttaagtggggcgagatcctgccatatagcaacgtggttgtc
gtattttttttcctgatggcatttgccactgccactatcatgcagtgcttcctcatcagt
actttcttctccaaagccaacatggctgccgcatgtggggggctcatatactttagcctc
taccttccgtacatactgtttgtggcatggcaagaccgagccaccaccacaattaaagtt
tttgctagctttctgtctcctgtggcttttgggttcggctgtgagtatttctctcaatat
gaggagcaaggcgttgggatccagtggtccaatatgcagtccagtccggtggagggcgac
tcgtacaactttgcgacatctattgggatgctttatgtggatgccttcatctatgccgtg
gcagcttggtacatcgaaatggtgttccctggtgaatatggcatgccccggccgtggtac
ttcctctttcatattaactactggaggggaattccgctggaggatggcattccaatcccc
acggcccctatggagcagggtaaagatcgcattgaagtagacccaagtaacctggtcctt
ggcgtcagcataagtaacctggtgaaaatatacaagaaaggagccaagctggcagtcaac
cacctcaacctgaagttctacgaggggcagatcacctcatttctcggtcacaatggagcg
ggaaaaactactaccatatcgatattgaccggtctgttcccacccacctcgggcacggtg
tatattaatggaatggacatccgctacaacatcgacaccatccgaaggacacttggagtt
tgtccgcaacataatgtcctgtttgatcttctaacagtggaggagcatgtatggttttat
ggacgtctgaagggtatgtctgaagaagaggtgaagtctgagctcgactcttggctcgaa
gaagttggacttcttcacaaacgtcatgaacaaactgaaacactctctggtggcatgaag
aggaagctgtcggtggcaatagcatttatcggaggctccaaggtggttgttttggatgaa
cctacagcaggggtggacccgtactcccgtcggagcatttgggacttgttgctgaaatat
cgcaaagaccgaaccataatcctctccactcattacatggatgaggcagaactacttggt
gatcgcattgccatcatctcccatggaaggctgtgctgctgcgggtcaccactttttctt
aaatctaaactaggatctggctactccctgactgttgtcaaaaaggacagcaatttatta
cagactggaggaacacccagatcctgcaatggagacgcaggtctggctaatgtggacaat
agttcatccatggaagccctgctgtccttggcacaacgccactttcctgattccaggctg
gtggaggagtcacagtgtgaggcggtgttaaatctaccccaggaagcctccaagaacagc
cgcctggctgtctttctgtctgaactggataagaatctaagccagattggaattctcagc
tatggcctgtctgacagcaaactggaggacatctttctacgagtggcagaggaaactgag
gttaaagcaggaccagggctgcaggctaatcttcctcagcattcgcaacaggaggaagaa
cccaagatagagcctcaggaggaagagctgctgagtagacttggccaaggtgccaccttg
actggatggagcctgaaatggcagcagctgcgagctctcttcatcaaacgatggctgtat
gttcgcagaagtcgtcgagccctttttgctcagattgtgctgcctgctgtgtttgtactg
atcgccctgtttgtcagtcgcgttgtcccacagtctgggaagtacccagccctggagctc
cagccttgcatgtatggaaaacagtacattttcttcagcatggatgctcctaaaaatcca
cccatggaaaagttactggaagccttgttggaccaaccaggtttcgattccaaatgtatg
gagaacaagaaaagcaccgttacccaccggcatgaaagtaaacaagggcgtgtgttcaag
cggcctcaggtccctgactccacctggcaaatgttcagcacagtcaactggaccaaggag
agaccttcacccgactgtcagtgcagcacagaggactcacgccggatgctcccagactgt
ccagagggagctggcggacttccccctccacaggtcacactgtatcctggtgtcatcctg
caaaatctgacaagttataatatgtcagattacctggtgaagacctactcacaaattctt
cggaagagcctgaaggccaagaagttggtgaatgaactgaggtatggaggcttctccctc
ggaagtgtgaggcctttacctcaggacatcgatgtcaaagattcagttacaaaaatcaaa
aatgacttctcagtttcacagaatagtgcattgaataagttcttaaacaaactggttggg
tttctggaacgcctcgatgcacaaaataatgtcaagctctggttcaataacaaaggctgg
cacgctatggtgtcatttgttaacgtggtgaacaacggcttgctcagaggcggacttcaa
catggccctcgtagaccaagcatcacggcatataatcacccgctgaacctcagcaaggag
cagcttagccaaattgcccagagctcatcttcagtggacatcgtgatttctgtctgtgtg
atctttgccatgtcctttgtgccagccagctttgtgcttttcctgattgatgaaagagct
agtaaagccacacatctgcagtttgtcagcggcgtccagccaatcctctactgggtggcg
aacttctgctgggacatgctgaactacaccatcccagccattatcgtggtgctcatcttc
atcagtttccagcaagaagcgtatgtctcagcgaccaacctgccagctctcatcctgctc
ctcctcttctacgggtggtccatcacccccttgatgtatccagcatcctttgtgttcacc
gttcccagcacggcctacattgttttgacctctgtcaaccttttcattggaattaatggc
agcattgcaacatttgttttggaattgtttgcagatgagtctttaaacgagctaaacaag
gtcctgaagaaattgttactcattttccctcattactgcttgggaagaggtctcatggac
ctggctaagaaccaagccatggctgaggtctctcagagactaggcatgaatcagagctcg
gaccaccctttgcagtgggactttgttgggaagaacctctttgctatggcaacagagggg
gttgtcttcttcattttcaccttaatgctgcagtacaaattcttcattgggcacatgagt
tttcgaaacacccgtctttgtctgtcatgtgtcaggccatggtcggttgtgtctgatgtc
cttcctcttggccctgaagatgaggatgtggccagggaacgaaagcgggtcaaaagaggc
aatgctgattccgacatcctcaccatgattgacttgaccaaaatatacaaagctggaaag
aaaccagctgtcagtcggctctgcctggggattcctcgtggcgagtgttttggcctgctc
ggtgtgaatggcgcagggaagacaactacgtttcgcatgctgacgggagatacgtcgatc
agctttggagaggctttcctcaaccaccacagtgtcctgagagagctggacagggttcac
cagctgatgggatactgcccgcagtttgacgccatctgcaacctattgactggcattgaa
catctggagctttatgcccgtctacgagggatacctgaggagtctgtcaccgaggtggct
aagttgggtgtgaagaaaatgggactgagtcagtatgccaagcaagaggctggaaactac
agcggaggcaacaagaggaagctctccaccgcgatcgccctcattggtgctccgcctgtt
ttatttctggatgagccaacaacgggcatggatccaaaggctaaaaggttcatgtggaac
tgcattctctgcttcaccaaagagggaagtgctgtcgttctgacctcccacagtatggag
gaatgtgaggctctctgcaccagaatggccatcatggtcaatggccgtttcaagtgtctt
ggctctgtgcagcacttgaagaacagatttggtgatggctacaccatcatcctgcgtctg
gcagacagtgattccaatccagacacatgccctgtcaaaaactatatcaagaacaccttt
cccatgatcgagttgaaggagcagcaccagaacgtgcagcagtaccagcttccagcacat
gcctgctgtctggttcaagtgtttgacgtgctggccaaatatgaggagctgggcatcagt
gacttctccgtgtcacagaccactttggaccaggtctttgtcaactttgctaaggagcag
actgatgatgatcagccctcaaacgtgaacattgacaatgggaccgtacagagcaacctg
tccacccgacgatttcagatgttttcctcaggcgtcccgcacaagacaccaatctcgcag
caaaggacctccgcttgtgacaaaagaagcaagagggaaattaaaacctccatatctcag
ccaaagaagaaatgtagaaaaagcatgcgcagcagcagcttcactggtaataccgttggc
actgaggaagaggtgtgtcaatctacaaggtcaaaacggagcagcaaagatcagaatcag
aatcagaattcgtctgtctttgtagttggcacgagcacagacgacacatcactgtga
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integrated database retrieval system
