Hippocampus comes (tiger tail seahorse): 109519521 Help Entry 109519521         CDS       T04969                                  Symbol nrde2 Name (RefSeq) protein NRDE2 homolog   KO K26109   nuclear exosome regulator NRDE2 Organism hcq  Hippocampus comes (tiger tail seahorse) Brite KEGG Orthology (KO) [BR:hcq00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hcq03019]     109519521 (nrde2) Messenger RNA biogenesis [BR:hcq03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      109519521 (nrde2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  NRDE-2 HAT_PRP39_N TPR_14 HAT_Syf1_CNRKL1_N Motif Other DBs NCBI-GeneID:  109519521 NCBI-ProteinID:  XP_019731655 LinkDB All DBs Position Unknown AA seq 1557 aa AA seqDB search MALFPAFAGVTSDKVDDSPNELKWLNNKSFQTSDALSLHSRFLETKNEGLHKDLSLDRKD EDTVPSKKKKKHEKHGKKRKKHKEKVKRSTESSGSDSEPIFPSDLKRKQETDRPQAAAIP SSFSWLDDIPSPTAQPFCVDSKSDASNWTYKSLYRGDVARYKRKGISSLGLDPRRQEIRW EDTKKKHKGGDKKKGTDRYFFPACRLLLRSQPPLQTLPRVCESSDVTNSNPFLPLEDTVG ERDGQPGGRAQISSVNPLGVYDSTTALWLQGKGKQDPTDHHDNHNSETGQEAQLLTGQTE EFNRKLREQPEDTQLWLKFIRYQDELSAAVFGGEEEQQGKELLERRKSSYKAVLEKKLSI AERAVATNPGCVALQRERLRICQELWEPSALAKEWKKLVFLHPNSGPLWREYLLFTQSYF SNFSVSKVNSAYGKCLSMLSAVRDGSMVSHPALPGIEEDMLDIFTKQCHFLRQSGHSEKA LSLFQAMIDFTFFKPDSVRQLSTKQQVNAQIKHIVHQPMRNYILEDEEEEEEEEEVKDRS QPRWTVWLDVESSREAAHWLPWRPEKAKGQSEDDCEDPERQVLFDDIGPSLICLSSPELQ LRFLLHFLSFLGLPVDTVLSAGLCHPGLLLEDLSLLTQGSDSRRALTSHNLPRPGMNSVG HMTTLQGTRKWVGLGKQGEKFVNAMFNMLQPVLPSEQRAVLSLSRMQYEKLKVFRCLHGN KKRLRSQSKISKRIAKSLLKEAENRSSLAMWREFALGPEVTSSDSRRALTSHNLPRPGMN SVGHMTTLQGTRKWVGLGKQGEKFVNAMFNMLQPVLPSEQRAVLSLSRMQYEKLKVFRCL HGNKKRLRSQSKISKRIAKSLLKEAENRSSLAMWREFAQLEWMLGNVEEARKVFSAATAL GGAKGLCHPSLCELCLLWAQLEVEDGESGPGGVPTDRGASTAVCVLTTLTEGHALSPSSL SQPVSPVAILKARRSYEQALTAALSALNQDLCNPQADKKSHVDVREEKLRLKGLLGCYAL FQYLTMGIKAASAVYSQARERMDELHRTITSDQNSRADADHSGSNLLVSRFAYECETVAV QQASLLKYHMSVSAFPLATLRDTLTSAISRWPSSGPLWSIYVQVENRYHSAGRARCFFHS VTRDNDSVVPRLFAIVAEQQRKQLVDAAQRSCDKSAALSVLPENGLSNRIRGLFESAVGS EMGVHCPLLWRMYIHYLVLFDDIGPSLICLSSPELQLRFLLHFLSFLGLPVDTVLSAGLC HPGLLLEDLSLLTQGRVDVREEKLGLKGLLGCYALFQYLTMGIKAASAVYSQARERMDEL HRTITSDQNSRADADHSGSNLLVSRFAYECETVAVQQASLLKYHMSVSAFPLATLRDTLT SAISRWPSSGPLWSIYVQVENRYHSAGRARCFFHSVTRDNDSVVPRLFAIVAEQQRKQLV DAAQRSCDKSAALSVLPENGLSNRIRGLFESAVGSEMGVHCPLLWRMYIHYLVSEGKMDN AKGLFYKALQNIPWVKGLYMDAVQLFPEHIQEFVDLMTEKELRVRLPLEELDILLED NT seq 4674 nt NT seq  +upstreamnt  +downstreamnt atggcactgtttccagcctttgcaggagttaccagcgacaaggttgatgattcacccaat gaactgaaatggctaaacaataagagttttcagaccagtgatgccctgtctcttcatagt cgcttcttggagacgaaaaatgaggggctacacaaagacttgagtttagacaggaaagat gaagacactgtgccatcgaagaagaaaaagaagcatgaaaagcatgggaaaaaaagaaaa aaacacaaagaaaaagttaaaaggtcaacagaaagcagtggatcggactctgaaccaatc ttcccaagtgatctcaagcggaaacaagaaacagaccgtccgcaggctgctgcaattcca agttctttctcatggttggatgacattccgtcgcccacagcacagccattctgtgtggat tctaaatctgatgcgtccaactggacgtacaagtctctgtacagaggagatgtagcaagg tataagaggaaaggtatttcatcactgggtctggatcctcgcagacaagaaatacgctgg gaggacacgaaaaagaaacataaagggggcgacaagaagaaaggaacagacagatatttt tttccagcgtgtcgtctgctgctcaggtctcagccacctctccagaccttaccaagagtt tgtgaaagcagtgatgtcaccaactccaacccttttctcccactggaagacactgtgggg gagagagatggacagccaggtggcagagcgcagatctcatcagtgaatccgcttggcgtg tacgactccaccactgccctctggctgcaggggaagggaaagcaggacccgacagatcat cacgacaatcacaactcggagacaggacaagaagctcaacttttgaccggtcagactgaa gagttcaacaggaaattgagagagcaacccgaggacacccagctctggctgaaattcatt agatatcaagatgagttgagtgccgcagtattcggaggtgaggaagagcaacagggcaaa gagttattggagcgtcgcaagtcttcttataaagccgtgctggagaaaaagctcagcatt gccgagcgtgccgtggcaactaaccccggctgtgtggctctgcagcgggagaggctcagg atctgccaagagctttgggaaccatcagctctggctaaagagtggaagaaactggtcttt ctccacccaaatagtggccctctgtggagggagtatcttcttttcacccagagctacttc agcaacttcagtgtgtcaaaagtgaactctgcttatgggaagtgtctcagcatgcttagt gctgtccgggatggcagcatggtgtcccacccagccctgccagggattgaagaggatatg ctagatatcttcaccaagcagtgtcatttcctccgtcagtccggacactcagagaaggca ctctctctctttcaagcgatgattgactttacgttcttcaagcctgacagtgtacgacaa ctttccaccaaacaacaggtaaacgcacaaataaagcacattgtacatcaacctatgagg aattatatactggaagacgaggaggaggaggaggaagaggaggaggtgaaggaccgcagc cagccacggtggaccgtgtggctggatgtagagtcatctcgcgaagctgcgcattggttg ccttggagacctgaaaaagccaagggccaatcagaagatgactgtgaggacccagagaga caggtgctgttcgatgacatcggcccttctctcatttgcctgtcctcgccagagcttcag ctccgcttcctcctccatttcctgtcatttctcgggcttccagtggacactgtgctatct gctggcttgtgtcatcctggactgctcttggaggacctttctctgctcactcagggtagc gactcccgacgagctctgacttcccacaacctgccacgccccgggatgaactctgtgggt cacatgaccacactccaaggaaccaggaaatgggtaggacttggaaagcagggcgagaag tttgtcaacgcgatgttcaatatgctccagcctgttcttccgtctgaacaacgagctgtc ctgtcgctcagccggatgcagtatgagaaactcaaggtgtttcgttgcctgcacggcaac aaaaaacgtttacgctctcagagcaaaatcagcaagcggattgccaaatcactgctcaaa gaagccgaaaaccgctcatccttggcaatgtggcgagaattcgccttaggtcccgaggta acaagtagcgactcccgacgagctctgacttcccacaacctgccacgccccgggatgaac tctgtgggtcacatgaccacactccaaggaaccaggaaatgggtaggacttggaaagcag ggcgagaagtttgtcaacgcgatgttcaatatgctccaacctgttcttccatctgaacaa cgagctgtcctgtcgctcagccggatgcagtatgagaaactcaaggtgtttcgttgcctg cacggcaacaaaaaacgtttacgctctcagagcaaaatcagcaagcggattgccaaatca ctgctcaaagaagccgaaaaccgctcatccttggcaatgtggcgagaattcgcccaatta gagtggatgctcggtaacgtcgaagaggctcggaaagtgttttctgcagccacggcattg ggtggggccaaggggctgtgtcacccctccctttgtgagctttgtctgctgtgggctcaa ctcgaggtggaggatggagaaagtgggccaggaggggttcccaccgacagaggtgcatct accgccgtttgtgtgctcaccacactgacagaggggcacgccttgtcgccttcttcgtta tcacagcccgtctccccggttgccatcctgaaggccaggaggtcttacgaacaagctctg actgccgctttgtctgcattaaatcaagatctctgcaatcctcaagccgacaaaaaaagt cacgtggatgtccgagaagagaagctgagattgaaagggctgctaggctgctacgctttg ttccagtacctcaccatggggatcaaggcggcaagcgcagtctacagccaggccagagag cggatggacgaactccaccgcacaataacgtctgaccagaactctcgcgctgatgccgac cactctggcagcaacctgttagttagcaggttcgcttacgagtgtgagacggtggcggtg cagcaggcgtcgttgctcaagtaccacatgagcgtcagtgcatttccactggcgacactg agagacacactcacctctgccatttcgagatggccaagcagtggccccctctggagcatc tatgtacaggtggagaaccgttaccatagtgctggccgagcacgttgcttttttcactcc gtaacaagggacaacgatagtgttgtgccacggctctttgctattgttgctgaacaacaa aggaagcaactggtggacgcagcacagagatcctgcgacaaaagcgcggccttgagtgtc ctgccagagaacggtctcagcaaccgtatccgtggactgttcgaaagcgccgtcggatcc gagatgggcgtccactgtcccttactttggaggatgtacattcactacctggtgctgttc gatgacatcggcccttctctcatttgcctgtcctcgccagagcttcagctccgcttcctc ctccatttcctgtcatttctcgggcttccagtggacactgtgctatctgctggcttgtgt catcctggcctgctcttggaggacctttctctgctcactcagggtcgcgtggatgtccga gaagagaagctgggattgaaagggctgctaggctgctacgctctgttccagtacctcacc atggggatcaaggcggcaagcgcagtctacagccaggccagagagcggatggacgaactc caccgcacaataacgtctgaccagaactctcgcgctgatgccgaccactctggcagcaac ctgttagttagcaggttcgcttacgagtgtgagacggtggcggtgcagcaggcgtcattg ctcaagtaccacatgagcgtcagtgcatttccactggcgacactgagagacacactcacc tctgccatttcgagatggccaagcagtggccccctctggagcatctatgtacaggtggag aaccgttaccatagtgctggccgagcacgttgcttttttcactccgtaacaagggacaac gatagtgttgtgccacggctctttgctattgttgctgaacaacaaaggaagcaactggtg gacgcagcacagagatcctgcgacaaaagcgcggccttgagtgtcctgccagagaacggt ctcagcaaccgtatccgtggactgttcgaaagcgccgtcggatccgagatgggcgtccac tgtcccttactttggaggatgtacattcactacctggtgtcggaaggtaagatggataac gccaaggggctcttctacaaagccttgcagaatattccctgggtgaagggcttgtacatg gatgcagtgcagctatttcctgagcacatccaggagtttgttgacctgatgacagagaaa gagctgcgagttcggttgccgttagaagaactcgacatactgctggaagactga

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