KEGG   Hippocampus comes (tiger tail seahorse): 109519702
Entry
109519702         CDS       T04969                                 
Symbol
dync1li2
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 2 isoform X1
  KO
K10416  dynein cytoplasmic 1 light intermediate chain
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq04145  Phagosome
hcq04814  Motor proteins
hcq05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109519702 (dync1li2)
  09142 Cell motility
   04814 Motor proteins
    109519702 (dync1li2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109519702 (dync1li2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hcq04131]
    109519702 (dync1li2)
   03036 Chromosome and associated proteins [BR:hcq03036]
    109519702 (dync1li2)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hcq04812]
    109519702 (dync1li2)
Membrane trafficking [BR:hcq04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab4 associated proteins
    109519702 (dync1li2)
Chromosome and associated proteins [BR:hcq03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Motor proteins
     Dynein complex
      109519702 (dync1li2)
Cytoskeleton proteins [BR:hcq04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     109519702 (dync1li2)
SSDB
Motif
Pfam: DLIC ABC_tran AAA_22 PduV-EutP AAA_16 NPHP3_N Arf SAP130_C Roc NACHT AAA_29 AAA_24 ATPase SRP54 AAA_7
Other DBs
NCBI-GeneID: 109519702
NCBI-ProteinID: XP_019731957
UniProt: A0A3Q2YL35
LinkDB
Position
Unknown
AA seq 492 aa
MAPVLEKQLPGVAGAGDNNNEEEEGLDLWTSILSDVSTQSSSKLPSGKNILVFGEDGSGK
TTLMSKLQGAEHNKKGRGLEYQYLNVHDEDRDDLTRCNVWILDGDLYHKGLLKFAVSAQS
LCDCLAMFVADMSRPWTIMESLQKWASVLRDHVDKLKIPPEDMREMELKMVKAFQEYVEP
EEATPASPQRRAMAAGEDDTVVLPLGDNTLTHNLGIPVLIVCTKCDSVSVLEKEHDYREE
HFDFIQSHIRRFCLQYGAGLIYTSAKEEKNLDLLYKYIVHKLYDFHFTNPALVVEKDAVF
IPSGWDNDKKICILHENLTTVRPEDPFEDFITKPPVRKLVHDKEINAEDEQVFLMKQQSL
LAKQPATPTRGATESPGRTASGSPRPAGRAGQPTLGSGSPMAAVKKPDANMKAGAATEGV
LANFFNSLLSKKTGSPGSPGSGAVGAGVQGSAKKTGQKPGLTDVQAELDRMSRKQDPLVS
STNIPPQTENEA
NT seq 1479 nt   +upstreamnt  +downstreamnt
atggctcccgttttggagaagcaactgccgggcgtagccggggcaggcgacaacaacaac
gaggaggaagaaggactcgacctttggacctcaatactgagtgatgtgtcgacccagtca
agttcaaaattgccatcaggaaaaaacattctggtatttggggaggatggatcaggaaaa
acgacactcatgtccaagcttcaaggggctgaacacaacaagaaaggaagaggactggaa
tatcaatacttaaatgtccacgatgaagaccgggatgaccttacacgatgtaacgtgtgg
atcctggacggagacctgtaccacaaaggcctgctcaagtttgccgtttccgctcagtcg
ctgtgtgattgcctcgccatgtttgttgcggatatgtcgcggccctggaccatcatggag
tcactgcagaagtgggccagcgtgctacgtgaccatgtggacaaactgaagatccctccg
gaggacatgagagaaatggagctcaagatggtgaaagcgttccaggagtacgtcgaaccg
gaggaggccactcctgcctccccacagagacgggccatggcggcaggcgaagacgatact
gttgtgttaccgctgggggacaacacactcacgcacaacctcggcattccagtgctaatt
gtttgcacaaagtgcgactcagtcagcgtattggagaaggagcacgactacagagaagag
cactttgatttcatccagtcccacattcggcgattttgcttacaatatggagctggcctc
atctacacctcagccaaagaggaaaaaaacctcgatctgctttacaagtatattgtacat
aaattgtatgactttcactttaccaatcctgccctcgtcgtggagaaggatgccgtgttc
attccatcagggtgggataacgacaagaaaatctgcattctgcatgaaaacttgacaaca
gtcagacctgaagatccatttgaagattttatcacgaaaccccccgttcgaaagctggtg
catgacaaagagataaatgcggaggatgagcaggtattcctgatgaaacaacagtcttta
ttagcaaagcaaccagccacaccgacaagaggagctaccgaatctccaggacggacagcg
tcaggttctccgagacctgcgggacgtgccggccagcccactttgggcagtggttccccg
atggctgccgtcaaaaagcccgatgccaatatgaaagcgggagctgccactgagggcgta
ttggccaacttcttcaacagcctgttgagtaaaaagacgggatccccgggaagccctgga
agcggcgctgttggagccggcgtgcaaggctctgccaaaaaaacagggcagaagccgggt
ttgactgacgtccaggccgagttggaccgaatgagccgcaaacaggaccccctggtttca
tccaccaacataccgccgcagactgagaacgaagcgtga

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