Hippocampus comes (tiger tail seahorse): 109519853
Help
Entry
109519853 CDS
T04969
Symbol
tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109519853 (tbc1d1)
Membrane trafficking [BR:
hcq04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109519853 (tbc1d1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
109519853 (tbc1d1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
109519853 (tbc1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF2594
DUF5044
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
109519853
NCBI-ProteinID:
XP_019732222
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
MNGLYFEVKPTRNISRGVHLSSEYNPSISSETICDDMMEEAVEEAQYKLTLIGSLPVHRM
TTMAMLPWVVANISRSQEPGPTVSLCVSPSWVRCVCVRTEGLLWDPLTHTVLFECPPHQV
TKLIHNSQEPSSFGCLLRDAPSCACYVFKCQDSNKVPEIISTLRQAGKSSARNDDTFTIP
NKTLADPGDPKPLETHITFNSLSAAGSVANNPALSPATFAKKFEVLFCGRVTVAHKKAPP
ALIDECIEKFSQLAQGSGTTKKGVNAGGLVGGLKRALAFQSNGLGSPTLGNGATGSPTNG
KRPLLFKRDPSFPSLQALDENGLSPEISHAKTTDALTHSPGVQPTSLQENRTMLFTVGRS
QIFLVSPDTKKVAIEKSFREISFCSQGIRHVDHFGFICRETMERGSCHFVCYIFQCTDES
LVDEIMLTLKQAFSVAAVQQNAKCQNQQCDSCPMLQLHKLCERIEGLNASKTKLELQRHL
ASLDNQDQAAIFESTMRSRPKSEQEENELTMASLRNLYEERQRIHHHTLPNDTKQNDEAA
AAPVEVQQQSSSRQRLEQFKSRAKRSLTESLEGIWKGSSKAVALRGNSERSHSVSSISTV
NSQDQSCLDDSRSNSSQLHPTSSLKCHNSTGDLKHLDPFASPSSSPSSSLPGDGQPIGFR
RRASTFSHPPTPSSADDSPARTLTHTPQQDPAAASKPKLLRHYSVSTDTPHRNKRVPSNT
ALPPVPYCSSSSSPLLLPSSPSTGARLSKRRPLGGLRARLHASSSVPNFLKFQFLAPVEE
NDSTETTSRRPLCHFVFRDVAALYVSSTECEVGESPLRSHRHSWRQQIFLRVATPQKNTD
VIERGDNLDGGWACGGQAVGAGNVDLPMRAQPEERTRRSKEELRELWRTAILQQILLQRM
ERENQKLQASESDLQNKRLKLDYEEITPCLKEVTLVWEKMLGTPGRAKVKFDHETIHLSV
AQGVPRQHRGEIWKFLSEQYLLKQTVPSRPPTNDSPYKELLKQLTSQQHAILIDLGRTFP
THPYFQAQLGAGQLSLYNILKAYSLLDPEVGYCQGLSFIAGVLLLHMGEEDAFNMLKFLM
YDVGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYSHLEQQEIGPTLYATPWFLTAFASH
FPLGFVARVFDMLFLQGPEIIFKVALSLLGSHKPLILQHDSLESIVDFIKTTLPNLGLVQ
MEKTINQVCEMDVSKQLQAYEVEYHVLQDELLDTPPTLNQHQRAAQLERTNQSLRQQNLD
LLEELQVSYARVCSLESRVAALVQSESKLKEQVSSLEVEKQQLASTAARLQNLLASLGIQ
TTPDGHSLPPADAELCATQITVGMQASHEDWTLDSLHQPVCVVEKVVTGQEET
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgaatggactttattttgaagtgaaacccacaaggaatatctcccgtggggttcattta
tcttctgagtacaatccatccatttcttctgagacaatttgtgacgatatgatggaggag
gcagtggaggaagcgcagtacaaactgacattaatcggctctctcccggtccaccgtatg
accaccatggcgatgctaccctgggtggtggccaacattagcaggtcacaggagcccggt
ccaactgtgtcgctatgcgtgtcgccgtcgtgggtgcggtgtgtttgtgtgcggaccgaa
gggctgctttgggaccccctgacgcacactgtgctgtttgagtgcccaccccaccaggtg
accaagctcattcacaatagccaggagcctagcagttttggatgcctgctcagagatgct
ccatcctgtgcctgttacgtgttcaagtgccaggacagcaacaaggtccctgaaatcatc
agcacactacggcaagctggcaaaagctctgcacgcaatgatgacacttttaccattccc
aacaagaccttggcagatcctggagaccccaagccattggaaacgcacatcacctttaat
tctctttccgcagcaggttctgtggcgaacaaccctgccctgtccccagcaacctttgcc
aaaaagtttgaggtgctcttttgtggccgtgtgactgttgcgcacaagaaggccccccct
gctctaattgacgaatgcattgagaagttcagccagctagctcagggctcagggaccact
aaaaaaggggtaaatgccgggggattagtcggtggactgaagagggcattagctttccag
tctaatggactggggagtcctactttaggtaatggtgctactgggagccccaccaacgga
aaacgcccattgctattcaaacgggaccccagctttccatctctgcaggccctggatgag
aatggactctcaccagagatctctcatgccaaaactacagatgcactcactcactcacct
ggggtgcagcccaccagccttcaggagaacaggaccatgctgtttacggtgggcagatca
cagatctttttggttagtccagacactaagaaggttgccatcgaaaagagtttccgtgaa
atctctttctgctcacaaggtattcgccatgtggaccactttggctttatttgcagggag
actatggaaagaggaagctgccactttgtttgctatatctttcagtgtacggatgaatct
ctggtggacgagatcatgctgaccttgaagcaggcgttctccgtagcagctgtgcaacag
aatgcaaaatgccagaaccagcagtgtgacagttgccccatgctgcagctccacaagctg
tgtgagagaatagaaggtctcaatgcgtctaaaaccaaactagagcttcagagacacctg
gctagtctggacaaccaggatcaagctgcaatctttgagagtactatgaggtctcgtcct
aaaagcgaacaggaagaaaatgagcttacaatggcatctttgaggaatttgtatgaggag
agacagaggattcatcatcacactctgccaaatgacaccaagcagaatgatgaggcagcg
gccgctccagttgaggtgcagcaacaaagtagcagtcgacagcgtcttgaacagtttaag
agtcgagcgaaacgctcgctaacggaatccttagagggtatatggaagggaagcagcaag
gctgttgctctgaggggcaacagtgaaaggagccatagtgtatcctccatttctactgtc
aatagccaggaccagtcctgcctagatgactcccgatctaattcctcccaattgcacccc
accagctccctcaagtgccacaactcaacaggagacttgaagcaccttgacccctttgct
tccccatcttcctccccctcctcctctttaccaggtgatggtcagccaataggcttccgg
agacgggccagcaccttcagccacccacctacaccctcctcagcagatgattcaccagca
cgcactttaacacatacgccacagcaggaccctgcggctgcttcaaaacccaagctctta
cgacactactctgtcagcactgacacgccacaccgaaacaaacgtgttccatccaacacc
gcccttcctcccgttccttactgctcttcgtcctcctctcctctgctccttccttcttcc
ccttcaaccggagcaaggctcagtaaaagacgtcctctgggtggactacgtgctcgactc
cacgcctcatcctctgttcctaattttttgaaatttcaatttctggctcctgtcgaagaa
aatgacagcacagaaacaacgagcagaaggccattgtgtcactttgtttttagagatgta
gcagccctctatgtatcaagtacagaatgtgaagttggggaaagccctctgcgtagtcac
cgacactcctggaggcagcagatcttcctgcgagttgcaacccctcagaaaaacacagat
gtcattgagcgcggagacaatctcgatgggggttgggcatgtggaggccaagctgttggt
gcaggaaatgtggacttgcccatgagggctcagcccgaagagcgaaccagaaggagcaaa
gaggagttgagggaactatggagaacagccattctgcagcaaatcctcctgcaaaggatg
gaacgagagaaccagaaattgcaggcttctgagagtgatttgcagaacaagcgtctcaag
ctggactatgaggaaatcactccttgtctcaaggaggtcacgttggtctgggagaagatg
ctgggaactcctggaagggcaaaggtcaaatttgaccatgaaaccatacatttgtcagtt
gcacaaggggtgccgaggcagcatcgaggagagatctggaagttcctctctgaacagtat
ctgctcaagcagacggtcccctcccgtccaccgaccaatgattcgccatacaaagagctg
ctcaaacagctgacctcacaacagcacgccatccttatagatttgggtcgcacttttccc
actcatccctatttccaagcccagctgggggcgggacaactgtctctgtataatatcctc
aaggcctactcgctgctggaccctgaggtgggatactgccagggcttgtccttcattgct
ggagttttgctgttacacatgggggaagaggacgccttcaacatgctcaaatttctcatg
tatgatgtcggcctccgcaaacagtacaggccagatatgattatcctgcagattcagatg
taccagttgtcacgtctgctccatgactatcaccgggatctctacagccacctggagcaa
caggagatcgggcccactctgtacgccacgccatggttcctcaccgcttttgcctcacac
ttccccctcggctttgtggcaagagtctttgatatgttgttcctccaggggccagagatc
atctttaaggtggccctgagtctcctggggagccacaagcctctgatcttgcaacatgac
agcctggagtccattgtggacttcatcaaaaccacactgcccaacctgggcctggtgcag
atggagaaaaccatcaatcaggtttgtgagatggatgtgtccaaacagcttcaggcgtat
gaggtggagtaccacgtcttgcaggatgaactcctggacacgcccccgaccctcaaccaa
catcagcgcgctgcacagctggaaaggaccaatcagagcctgcgacagcagaaccttgat
ctcctcgaggagctgcaggtctcgtatgctcgggtgtgcagcctagagagtcgagtggcg
gcactggtacagtcagagagcaagttaaaggagcaggtttcttccctggaggtggagaag
caacagctggcaagcacggccgcgcgtctccaaaacctgctcgccagcctgggcatacaa
acgactcctgatggccatagcctgcccccggccgacgcagaattatgcgcaacccaaatc
acagtgggtatgcaagcaagtcatgaggattggactttggactccctgcaccaacctgtg
tgcgtagtggagaaggtggtcactggacaagaggagacctga
DBGET
integrated database retrieval system
