Hippocampus comes (tiger tail seahorse): 109519889
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Entry
109519889 CDS
T04969
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109519889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcq03041
]
109519889
03009 Ribosome biogenesis [BR:
hcq03009
]
109519889
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109519889
Spliceosome [BR:
hcq03041
]
Complex A
U1 snRNP components
U1 related factors
109519889
Complex B
109519889
Ribosome biogenesis [BR:
hcq03009
]
Eukaryotic type
Pre-60S particles
Helicases
109519889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
109519889
NCBI-ProteinID:
XP_019732295
UniProt:
A0A3Q2Z8Z5
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGSGGGGGGSRGGPPPAKFGNPGERLRKRHWNLDELPKF
QKDFYQEHPDVTRRMLQEVEQYRSSKEVTVKGRECPKPIARFHEAAFPNYVMDVIMKQNW
IEPTPIQAQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLA
PTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC
GKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFL
KDYVQINIGALQLSANHNILQIVDVCNDMEKEDKLLRLLEEIMSEKENKTIIFVETKRRC
DEITRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVI
NYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQM
AEDRGGRGRGSRGGYKDDRRDRYSGGGRRENFGGGGYRDRDNDRGFGNGPKGGFGGKMQN
GGGYGGNGGNAGGSYGNNYGNSNGQGNFGAPPNQVGAFGNQSFQGQGPPQFGGMQRPGQN
GMNHPFPYVPQPPPPPQAQQPPPPPPMAPYPMPPPFPQ
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccgggattttcagacagagaccgtgggcgagatagaggatatggtgggggacctcct
cgttttggaagtggtggtggtggtggaggcagcaggggtggacctcccccagcaaagttt
ggcaaccctggtgaaaggctaagaaagagacactggaaccttgatgagcttcccaagttt
caaaaggacttttatcaggaacaccccgatgtcacccgaagaatgcttcaagaggttgaa
cagtacagaagcagcaaagaagttacagtcaaaggcagagaatgccccaaaccaattgca
aggttccatgaagcggcatttccaaactatgtcatggatgtgatcatgaaacagaactgg
attgaaccaacccctattcaagctcagggctggccagttgctctcagtggcaaagacatg
gttggcattgctcaaactggctctgggaaaactctcgcataccttctccctgctattgtg
cacatccaacatcaacctttcctggagcatggtgatggacctatctgcttggtattggcg
cctacacgtgagctggcccagcaggtgcaacaagttgctgctgaatacggcagggcctcc
cgtctcaagagcacctgcatatatgggggcgcacccaaaggaccccaaattcgggacctc
gagaggggagttgagatttgtatcgctactccgggtcgtctgattgatttcctcgaatgt
gggaaaacaaatttgcgccgttgcacctaccttgtacttgatgaggccgaccgcatgctc
gacatgggattcgaaccacagatccgcaagatcgtggaccaaatacggccagaccgtcag
accctgatgtggagcgccacctggcccaaagaagttcggcagctcgctgaggacttcttg
aaagattatgtacagatcaacattggagcgcttcagctcagcgctaaccataacatcctg
cagattgttgacgtttgcaatgacatggagaaggaagacaaactgcttcggctgctggag
gagataatgagtgaaaaggagaacaagacaattatttttgtggagacaaaaaggcgctgc
gatgagatcacccggaggatgagaagggatgggtggccagcaatgggaattcatggagac
aagagccagcaggagagagactgggtccttaatgagttccgatacggcaaagcaccgata
ctcatcgccacagatgtggcctcccgcggcttagatgtggaggatgtgaaatttgtcatc
aattatgactaccctaactcctccgaggattatatccaccgcattggacgcacagcccgg
agtcaaaaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaggcaagt
gacctgatctctgtgctgcgcgaggccaaccaggccattaaccccaagctcatccaaatg
gcggaggacagaggaggtcgtggaagggggagccgaggtggatacaaagatgaccgtcga
gataggtattctggaggtgggcgtcgtgagaactttggtggtggaggctacagggacagg
gacaatgatagagggtttggcaatgggccaaagggtggctttgggggcaagatgcaaaat
gggggcggctatggaggcaacggcggtaacgctggtggtagctatggcaacaattatggc
aacagcaatggccagggtaactttggtgctccgcccaatcaggtgggagcctttgggaac
caaagctttcagggccaaggcccccctcagtttgggggcatgcagagacctggccagaat
ggtatgaaccacccgtttccttatgtccctcagcccccaccacctccacaggctcaacag
ccaccacccccgcctccaatggcaccctaccccatgccaccaccctttccacaatag
DBGET
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