Hippocampus comes (tiger tail seahorse): 109520039
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Entry
109520039 CDS
T04969
Symbol
cacna2d4
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04010
MAPK signaling pathway
hcq04260
Cardiac muscle contraction
hcq04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109520039 (cacna2d4)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
109520039 (cacna2d4)
04261 Adrenergic signaling in cardiomyocytes
109520039 (cacna2d4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcq04040
]
109520039 (cacna2d4)
Ion channels [BR:
hcq04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109520039 (cacna2d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA_3
VWA_2
dCache_1
VWA
MCP-like_PDC_1
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
109520039
NCBI-ProteinID:
XP_019732546
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
METNAGDAGQRQRNGPRRTRLTMLPWIILCCSLWLTVDGQMKISPEIVQKWAESFGKEIA
SLSAKYSGAELLQKKYKDVEGGLKMEEVDGEELVKTFAEEMEKMLGRKMKSVKRLAEAAE
DADLYHEYNDTLEFEYYNSMLINTVDEDGNPLPLGGDFPLEKNEHFSKLPVNTQQSNIQV
PTNVYNRDTDILNGAYMSEALNDVFMDNFQKDPTLTWQYFGSSSGFFRLYPGIQWTPDEN
GVVTFDCRNRNWYIQAATSPKDVVIVVDVSGSMKGLRLTIAKHTINTILDTLGENDFVNI
IAYSDYVRYLEPCFKGILVQADLDNREHFKLLIDGLHVKGEGKVKKAMKESFKILNEAAA
VGQGSLCNQAIMLITDGAMEDFQDVFEEFNWPERRVRVFTYLIGREMTFAENVKWIACNN
KGYYTHISTLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDSVLFNSQAQSLLLMTS
VAMPVFSKKKETLSHGILLGVVGTDVALKELMRLAPRYKLGVHGYAYLITNNGYILSHPD
LRPLYKEGKKLKPKPNYNSVDLSEVEWEDTEEKLRTAMVKGETGTLSLDSRTSVDKGKRV
MFLKNDYFFTSINETPFSLGIVLTRGHGQYIFIGNVSVEEGLHDLLAPDLTIASEWTYCE
TDIDPAHRKLSQLQAVVRYLTGKEPDLECDMQLIQQTLFDAVVTAPMEAYWTALMLNPSG
MDDGIETAFLGTRSGLMRFQRYTGIEKRVGMSFLTSTDKENMFTLDHFPLWFRRAAEYPA
GKFLYYMPRQETRAGRIVIATTAATVTVGKKTAIAGAIGVQMTLEVMESRFWAIASQPND
TDCSDAEGICPLRCDSFDMECYVMDNNGFVLISKQRADAGRFFGEVDGSVMATLIRMGMF
KRVSLFDYQAMCKMNAHSTSSSRPLLSSFYALASALKWFLSNFLVFLLEFNVCGFWHTEH
FADASVHKKKGDILQPCDTEYPSFAYEPSVKETNSIIKCGRCQKMFVVQQIPQSNLLMLV
VQADCDCSRQYSPITMEPKEVKYNSSVKCERMRSQKIRRRPESCHAYHPQENANDCGGAS
AASLSAFLFLVCPSIASFLS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaacgccggcgatgccggacagcggcagagaaatgggccacggcgaacgagg
ctgacgatgctcccgtggattattctgtgctgctcgctgtggctgacggtcgacggccag
atgaagatctcaccggagatcgtgcagaagtgggccgaatcattcggcaaagagattgcg
tccctctccgccaaatactccggagctgaattactgcaaaaaaaatataaagacgtggag
ggcgggttgaagatggaggaggtcgacggcgaggagctggtcaagacgtttgcggaggag
atggagaagatgcttgggaggaagatgaaatccgtgaagaggttagcggaagcagccgag
gatgctgatctttatcatgagtacaacgacacactggagtttgagtactacaactcgatg
ctgatcaacacggtggacgaggacggcaacccactgccgcttggaggggacttcccgctg
gagaagaacgaacacttcagcaaactgccggtcaacacgcagcagagtaacatccaagtg
cccaccaacgtctacaacagagatacagacatcctcaacggtgcatacatgtcggaggct
ctcaacgacgtctttatggacaacttccagaaggaccccaccctcacctggcagtacttt
ggcagctcctccggcttcttcagactgtacccggggatccagtggaccccggacgagaac
ggggtcgtcaccttcgattgcaggaacaggaactggtatatccaagcggccacctccccg
aaagacgtcgtcattgtggtggatgtgagcggcagcatgaaggggctccggctcaccatc
gccaagcacaccatcaacacaatcctggacacgctgggagagaatgactttgtcaacatc
atcgcttacagcgactacgttcgatacttggaaccgtgcttcaagggaattctggtccaa
gccgatctggataacagagagcacttcaagctcctgatcgacgggctgcacgtcaaagga
gaaggcaaagtgaagaaggcgatgaaagagtcattcaagatcctcaacgaggctgcggcg
gtgggtcagggcagtctgtgcaaccaggccatcatgctgattacagacggcgctatggag
gacttccaggatgtttttgaagagttcaactggccggaacggcgggttcgagtcttcaca
tatctcatcggacgtgaaatgacattcgcggaaaatgtcaaatggattgcctgcaataat
aagggctattacacacatatttccacactggctgacgtccaagaaaacgtcatggagtat
ctgcacgttctcagccgaccaatggtcatcaaccatgaccatgacatcatctggacggaa
gcctacatggacagcgtgctgtttaacagtcaagcccagagtttgcttctgatgacgtca
gttgcaatgcctgttttcagcaagaaaaaagagacgctgtctcatggaattttgcttggc
gttgtcggaactgacgtggccctgaaagaattgatgagattagctccaagatacaagctg
ggtgtccacggttatgcctacctcatcacaaacaatggctacatcttgtctcatccggat
ctccgtcctctgtacaaggaagggaaaaagctgaagcccaaacccaactacaacagcgtc
gacttgtccgaggtggaatgggaagacactgaggagaagctcaggacggccatggtcaaa
ggagaaaccggtaccttgtccttagattcgaggacctcagtggataagggaaaacgagtg
atgttcctcaagaatgattacttcttcaccagcatcaacgagacacctttcagtcttggt
atagtgctgacaagaggacatgggcagtatatattcattggaaatgtctctgttgaagaa
ggccttcatgatttgctggctcccgatttgaccatagccagtgaatggacctactgtgag
accgacatcgacccagcgcatcgtaaactgagccagctgcaggccgtggttcggtacctg
acaggcaaagaaccggatcttgagtgtgacatgcagctcatacagcaaaccttgtttgac
gccgtggtgacagctcccatggaagcttactggactgccctcatgctcaacccatctggt
atggatgacggcatcgaaacggctttcctgggcacgcgctccggcctgatgagattccag
cgttacactggcatcgaaaagcgagttggcatgtcgttcctgacatccacggacaaggag
aacatgttcaccctggaccacttcccactgtggttccgcagggcggccgagtaccctgcc
ggaaagttcctctactacatgccccgacaggagaccagagccgggaggatcgtgatcgcg
accactgccgccactgtgactgtgggcaagaagaccgccatcgctggagctattggtgtc
cagatgactctggaggtgatggaatccagattttgggccatcgcatcacagccaaacgac
accgattgctcggacgccgagggaatttgtcctcttcgctgtgacagcttcgatatggag
tgctacgtgatggacaataacggcttcgtcctcatttccaaacagcgcgctgacgccggg
aggttcttcggcgaggtcgacggctccgtcatggcgacgctgatccgaatgggcatgttc
aaaagggtgtctctgtttgactaccaggcgatgtgtaagatgaacgcgcactccaccagc
agctcccggccacttctcagctcattctacgccttggcgtccgccctcaagtggttcctt
tccaacttcctggtgtttctccttgagtttaatgtttgtggattctggcacacggagcac
tttgcagatgcctccgtgcacaagaaaaaaggagacatcctgcagccgtgcgacaccgag
taccccagcttcgcctacgagccgtcggtcaaagagaccaacagcatcatcaagtgcgga
cgctgccagaagatgtttgtggtgcagcagatcccgcagagcaacctgctgatgttggtg
gtccaggccgactgcgactgctccagacaatactcgcccatcaccatggagcccaaagaa
gtcaaatataactcctcagtgaagtgcgagcggatgcgttcccagaagatccgcagacgc
cccgaatcgtgccacgcttaccatccccaggagaatgcaaacgactgtggcggcgcatcc
gccgcatctctctctgccttcctcttcctcgtttgtccttccatcgcctcatttctctcc
tga
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