Hippocampus comes (tiger tail seahorse): 109520252
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Entry
109520252 CDS
T04969
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04120
Ubiquitin mediated proteolysis
hcq04137
Mitophagy - animal
hcq04144
Endocytosis
hcq04340
Hedgehog signaling pathway
hcq04350
TGF-beta signaling pathway
hcq04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109520252 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109520252 (smurf1)
04350 TGF-beta signaling pathway
109520252 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109520252 (smurf1)
04137 Mitophagy - animal
109520252 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
109520252 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109520252 (smurf1)
04121 Ubiquitin system [BR:
hcq04121
]
109520252 (smurf1)
03029 Mitochondrial biogenesis [BR:
hcq03029
]
109520252 (smurf1)
Enzymes [BR:
hcq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109520252 (smurf1)
Membrane trafficking [BR:
hcq04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
109520252 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
109520252 (smurf1)
Ubiquitin system [BR:
hcq04121
]
Ubiquitin ligases (E3)
HECT type E3
109520252 (smurf1)
Mitochondrial biogenesis [BR:
hcq03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109520252 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
109520252
NCBI-ProteinID:
XP_019732923
UniProt:
A0A3Q2YQ99
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKADSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVLEGCFSEEPLPYSDATGA
AGGGNCRLDSPSQENRLQSQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQVKESSQAPQMDVGVDEGGVGGMSGGVGGDGDVAARYERDLVHKLKLLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGHYI
NGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLIWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKAFDHK
ELELIIGGLGKIDLTDWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgtctaccagatccttttgccaaggtt
gtggtggacggatccggtcaatgccactcgacagacacagttaagagcacactggacccc
aaatggaatcagcactacgacctctacattggaaaggcagactcaatcaccatcagcata
tggaaccacaagaagatccataaacggcagggggcaggcttcttggggtgcattagactt
ctttcaaatgccatcagcagactaaaagacacaggataccagcggctagatctttgtaaa
ctgaacccctcagacagtgacgcagtgcggggacagattgtagtgagcctgcagacacga
gaccgcataggtagtggaggccccgtggtggactgtcgaggtctgttggaaaacgatggg
cccgtgttagagggatgtttcagtgaagaaccgttgccttattctgacgccaccggtgct
gcgggcggtgggaactgccgtctcgactcgcctagtcaagaaaaccgtcttcagtcccaa
cgaatccgggggcaggactcccgaggacatggccacacacctcagaacagacctcacggg
caccagccacccgacctgcctgaaggatatgagcagcgaacaacagtgcagggccaggtg
tacttcctacacacgcagacaggtgtcagcacctggcatgaccctcggataccgagagac
ctggccagtgtaagctgtgaggaacttggtcccttgccagtgggctgggaggtccgaagc
accgtgtcgggccgcatttacttcgtggaccacaacaacagaaccacgcagttcacagat
ccacgtctacacaccatcatcagccagcaatcccaagtgaaggaatcctcacaagccccc
cagatggatgtgggggttgatgagggcggagttggaggaatgagcggcggtgtcgggggc
gatggggatgtggcggcacgctacgagagagatttggtccacaaactgaagctgctgcgc
cacgagctctctctgcagcagccccaagctggacactgtcgcattgaggtgtcccgtgaa
gagatatttgaggagtcgtatcggcagataatgaagatgaggcccaaagacctgaagaaa
cgtctcatggttaaattccgaggagaggagggactggactatggtggtgtggccagggag
tggctgtacctgctgtgccatgaaatgttgaatccctattatggcctattccagtactcc
acagacaatatctacacattacagatcaaccccgattcctccattaacccggatcacctt
tcatatttccactttgtgggccgggtaatggggctggcagtttttcatggtcactacatc
aacgggagcttcacgctgcccttctacaaacagctgttaggcaaacccattcagctcaat
gacctggagaccaccgacccagagttgcacaagagtctcatctggatattagagaatgac
atcacctcggtcctggaccacaccttctgcgtggagcataacgcctttgggaagtttcta
caacatgaactcaaacctaacggccgtaacattcccgttactgaggagaacaagaaggaa
tatgtgaggctttatgtgaactggaggtttatgcgaggaatcgaagcccagtttctggct
ctccagaagggatttagtgagcttatcccccaacatctcctaaaagctttcgaccataaa
gaacttgagctgatcatcggcggattgggtaaaatcgacctgactgactggaagacgaac
acgcgcttgaagcactgtacaagtgagagcaatgtggtgcggtggttctggcaggcagtg
gaggccttcagtgaggagaggagaggacgcctgctgcagtttgtcacgggctccacccgg
gtccccttgcaggggttcaaagcactgcagggctctacaggttctgcaggaccaagactc
tttaccatccatttgatagacgccaacactgacaacctgcccaaggcgcacacttgtttc
aacaggatagacatcccaccctacgagtcttatgagaaactttatgagaaactgctgacg
gctgtggaggagacctgcggcttcgctgtggagtga
DBGET
integrated database retrieval system
