Hippocampus comes (tiger tail seahorse): 109520361
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Entry
109520361 CDS
T04969
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq02010
ABC transporters
hcq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109520361
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109520361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcq02000
]
109520361
Transporters [BR:
hcq02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109520361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
109520361
NCBI-ProteinID:
XP_019733076
LinkDB
All DBs
Position
Unknown
AA seq
2213 aa
AA seq
DB search
MGLLTQFALLLWKNFTLRKRQKVRLVVEIVWPLFLFFILVSVRFTTEPTHKGQCHYPNKA
MPSAGVLPWIQGLVCNVDNPCLSHPTPGEAPGQVNNFNNSIISRALIELQSLLMNKSILG
NAQRLADDVTQWAAIMSRADARNGQPVQLTTILSDDETFSAHLRENLSMPLPVVESLMAA
NISVNSIPVPAPGTLGSFLCDDKDLDRYIHFRSPMEREAFQNASCSLAPQQLSDSQRVLL
QNLDPNKVLAQLPSALDLDAVDVTVLLARTTANALPVLQEVSRLQDSMILAWSLDFQGDM
IGSINMLLCGKQLDSNSTNVTLDSLSLRRAVSKQSITSDRNTSSSFCQTFIDTLEGTPGL
RYLWSTFKLFFRGKVLFTPDSPATRLIVKEANNTFNALAMLKEMADAWDELGPRVWDFFQ
NSQQVNAIRNLLANPVFAAALDQRLNGTGWTAALLANFLYNGAPEDRPSGVPPHDWRDLY
NATTQTLQLLSDFLGCLDLNKFDGAPSESQLVGKALELLKNDTYWAGIVFVNLLPNASRV
PPHVHYKIRMDIEEVERTNKRKERSWSPGARDNSFNDLRYIRGGFAYLQDMIDHGIVRTQ
TSTTQPFGVFAQQMPYPCYVDDTFVRSLGGIFPMFLVLAFIYTTCMTIKGLVLEKELRLK
EVLRAVGVRDSALWLARFAENMLLLAIPCALLSVLIKYGKVLQYSDPTVIFVFLLVFCLT
TVTQCFFISVFFSKANLAAACGGLIYFVLYLPHVLCYAWRDVLGFGAKVAVSLLSCVAFG
FGCESFSKYEEQGVGIQWSNMSQSPDEDERYTFLVSIAMMLFDAALYWTLTWYIENVFPG
QYGIPRPWYFPFTASYWCGRPSVPGDHLQKDAAGCLHNDYLEKSDPNLKVGVSVRNLVKI
YKTGNKLAVDGLSVDFYENHITSFLGHNGAGKTTTMSILTGLFPPTSGTAVINGYDIRTD
VDGARRHLGMCPQHNVLFNELTVEEHIYFYGRLKGRSRAEVDAEMEQMIRDVGLPHKRRD
LAKNLSGGMQRKLSVAIAFVGGSKVVILDEPTAGVDPYARRGIWELLLKYKQGRTIILST
HHMDEADILGDRIAIIAHGRMRCCGSSLFLKKRFGTGYYLTLVKERERPSRRGGAHDHAA
IGSRTYSGVHPADLTALGQLVHHHVPRALFLERIGQELTYVLPYDGAHDGTFARLFQDLD
LALADLGLTSYGISDTTLEEIFLKVAEDTGVDAADISTTKRNSISATAVHPETEKEASGD
MEMFASQVEGLQRDARVSGRGSTVLGGWELIRRQFLALFIKRFHHARRSRKGLIAQVVLP
AVFVCLSLIFSLIVPPFSEYPSLELQPWMYGTPQTTFFSNDAPGNAEVSEVVETLVNDPG
FGTRCMDGDPIPGLPCVSRISHWLTPSVDQSVADVFLEGNWSMSNPSPSCQCSTPQHQIM
LPDCPPAAGGLPPPQRIQNTTDILLDLTGRNVTDFLVKTFEQSGKTRYGGISVGAVNSQV
LLSEAAIEATFQNLNDIFNYSQDNVTDKLLRTAETLLKRLGTKHNLKVWFYNQAWHGVVS
FLNVANNAILRAGLPAGADARHYGISASNHPLNLTKEQLSFVALASSSTDVVVSICVIFA
MSFIPASFVLFLIQERVSKTKHLQFVSGVNPAVYWLANFAWDACNYAIPCVIVVIIFLCF
QQEAYVSAPNLPALVLLLLFYGWSITPMMYPASFVFSVPSTAYVVLTCVNLFIGINGSVA
TFVMELFDDRDVSYINDIVKQVLLIFPHFCLGRGLIDMAKNQAMANLFSGFGEDRFKEPL
SWEMVGKNLCAMSIQGAVMFAVTLLIQYKFFCKPRFISTKSSSEEEEDVDVARERERVYA
GKAQNDLLRIYDLTKVYPGKRIPAVDRLCVGVPTAECFGLLGINGAGKTTTFKMLTGDIP
ASSGEAFLNGYSIRTEMSAVHQNMGYCPQFDAINDLLTGREHLEFYARLRGVPEKEVAMV
AEWGIQKLGLVKYATKPAGTYSGGNKRKLSTAIALIGCPPLIFLDEPTTGMDPKARRFLW
DCILSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGHFKCLGSIQHLKSRFGDGYTVTVR
VGGHPPLLKPVEDFVDQTFPGSVLKEKHHNTLQYQLPAGQGALAHIFRQFTDQRGTLCVD
DYSVSQTTLDQVFVNFASRQHGEDDSQSYDNSVDTSDELQMQSAETSPGSYKV
NT seq
6642 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcaattcgctctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcgcttggttgtggaaattgtttggcctttgttcctctttttcatcctggtg
tcggtgcgcttcaccaccgagccgacccacaagggccaatgccactatccgaataaagcc
atgccatcggccggggtgcttccttggattcaaggtttggtgtgcaacgtcgacaatccc
tgtctgagtcatccaacgccaggggaggcaccgggacaagtcaataactttaacaactca
ataatttccagggcgctgattgagttgcagagcctcctgatgaacaaatccatcctcggc
aacgcccaacgactggctgacgacgtcacccagtgggccgcaatcatgtcgcgagctgac
gctcggaacggacaaccggttcagctgacgactattctgagcgatgacgaaacgttctca
gcgcatttgagagagaatttgtcaatgccgcttccagtggtcgagagcctcatggctgcc
aacatttctgtcaactcgatcccagtccctgcgcctggtacccttgggagcttcttgtgt
gatgacaaagacctggaccgctacatccattttcgcagcccgatggaacgggaggccttc
cagaatgccagctgctccctggccccccagcagctcagtgacagccagcgagtgctcctg
caaaacctggacccgaacaaagtcttggctcagctgccgtcagctttggatttggatgcc
gttgacgtgacggtgctgcttgcgagaacaacggcgaacgccctccccgttctacaggag
gtgagccgtttgcaggactccatgatccttgcctggtcgctggatttccagggggacatg
attggcagcatcaatatgcttctctgcggaaagcagcttgactccaattccaccaacgtg
accctcgactccctgtcgctcagacgagcggttagcaagcagtcaatcacgagcgaccgc
aacacttccagttctttttgtcaaaccttcattgacactctggagggaaccccgggtctc
cgttacctctggagcacattcaagctctttttccgaggaaaagtccttttcacacctgat
tccccggcaacacgcctcatcgtgaaagaggctaacaacaccttcaatgccttggcgatg
ctgaaagaaatggccgacgcttgggacgaattggggccgcgtgtttgggatttctttcag
aacagccagcaagtcaacgcaatacggaatttgctggccaatccggtgtttgccgccgcc
ctggaccaacgtcttaacggcactggctggaccgccgctctgttggctaacttcctctac
aacggcgcccccgaggatcgacccagcggggtcccaccccacgactggcgggacctttac
aacgccaccacccagactcttcagcttctgtccgacttcctcggctgtttggacttgaac
aagtttgatggcgctcccagcgaaagccagctggtgggcaaagcactggagctcctcaag
aatgacacttactgggccggcatcgtgtttgtcaacctgctgcccaacgccagccgagtc
cctcctcacgtccactacaagatccgcatggacatcgaggaggtggagcgcaccaacaaa
agaaaggaacggtcatggtctccgggggcccgagacaactcttttaacgacctgcgttat
atacgaggaggcttcgcctacctgcaggacatgatcgaccacggcattgtacgaacgcaa
acatccaccacccaacccttcggcgttttcgctcagcaaatgccgtacccttgctacgtg
gatgacaccttcgtccgaagcctcggcggaatcttccccatgttcctggtcctggctttt
atatacaccacgtgcatgaccatcaaaggcctggttttggagaaggagctgcggctcaag
gaggttctgcgagcagtgggcgtgcgcgacagcgccctttggctggcgagattcgccgag
aacatgcttctgctcgccattccgtgcgccctacttagtgtcctgattaagtacggcaaa
gtgctgcagtacagtgaccccacagtcatctttgtcttcctgttggtgttctgcctgacc
accgtcacccagtgcttcttcatcagcgtcttcttctccaaggccaacttggcggcggcg
tgcggcggactcatctactttgtcctctacctgccgcacgtcctttgctacgcctggagg
gatgtcctgggtttcggagccaaggttgccgtgagtttattgtcctgcgtggcgttcggt
tttggctgcgagagcttctccaaatacgaggagcaaggtgtcggcatccagtggtccaac
atgagccagagtcccgacgaggacgagcgctacaccttcctcgtatccatcgccatgatg
ctgtttgacgccgccctctactggacgctcacttggtacatcgaaaacgtcttcccaggc
cagtatgggatccccaggccatggtacttcccattcacggcatcttactggtgtggcagg
ccctccgtgcctggcgaccacttacaaaaggacgccgccggctgcttgcacaatgattac
ctggaaaaatcggaccccaatctaaaagttggggtgtcagtacgcaacctggtcaaaatc
tacaaaactggaaacaagctggctgtggacgggctgagtgtcgacttctacgagaaccac
atcacctccttcctgggccacaacggagctggaaaaaccaccaccatgtcaattctgacg
gggctcttcccgcccacgtcgggcacggccgtcatcaacggctacgacatccgcacagat
gtggatggcgcccggcggcacttgggcatgtgcccccagcacaacgtcctcttcaatgag
ctaacagtggaggagcacatctacttctacggccgtctgaagggacgcagtcgcgccgag
gtggacgccgagatggagcagatgatccgggatgtcggcctgccacacaagagacgagac
ctggctaagaacctgtcaggcggtatgcagaggaagctgtcggtggccatcgcctttgtt
ggaggatcaaaagttgtgatcttagacgagcccacagcgggggtggacccttacgcccgc
agggggatctgggagctgctcctcaaatacaaacaaggccgcaccatcatcctgtccacg
caccacatggacgaggcggacatcttgggcgaccgcatcgccatcatcgcccacggcagg
atgcgatgctgtggctcgtccctgttcctgaagaaacgcttcggcacaggctactacctc
accctggtcaaggagcgggaacgtccttcaagaagaggcggtgcccacgaccacgccgcc
atcgggagtcgaacctacagcggagtccatcctgcagatttgacagcgctgggtcagttg
gtgcatcaccacgtcccgcgggcgctgttcttggagcgtatcggccaggagctcacctac
gtcctgccctacgacggcgcccacgacggcacatttgctcggctcttccaggatttggac
ctggccttggccgacctgggtttgactagctatggcatctctgacaccacgctggaagag
atttttttgaaggtagctgaagacacaggagtcgatgcagcagacatttcaacaacgaag
cggaatagcatctcggctaccgccgttcaccccgaaacggaaaaggaggcgagcggtgac
atggaaatgtttgctagtcaagtggaaggtttacagagggacgccagggtcagcgggagg
ggctcgacggtcctcggcggatgggagctgatcaggaggcagttcttggctctcttcatc
aagcgtttccaccacgcccggaggagccgcaagggactcattgcccaggtggtcttgcct
gctgtttttgtgtgcctctctctgatcttctcactcatcgttccaccattctccgaatac
cccagtctggagctgcaaccctggatgtatggcacgcctcagaccaccttcttcagtaac
gacgcaccaggaaacgcagaggtgtctgaagtggtggaaaccctagtgaacgatcctggc
tttggaacacgttgcatggatggcgacccaatcccggggttaccttgtgtctcccgcatc
tcccattggctcacgccatctgtggaccagtcggtggccgatgtctttctggagggcaac
tggagcatgtccaacccttccccttcttgccagtgcagcactcctcaacaccaaatcatg
ctgcccgactgtccgcccgctgcaggggggctcccgcctcctcagagaatccagaacaca
accgacatcctcctggatttaacgggacgaaacgtgaccgacttcctggtgaagactttt
gagcagtccggcaaaaccaggtacggcgggatctctgttggagccgttaactcccaagtc
ctcctgagcgaggcagcaatcgaagccacgttccagaacctgaacgatatctttaattac
tcccaggacaacgtgacggacaagctcctccgcacggccgagacgctgctcaagaggctg
ggaaccaaacacaatctgaaggtgtggttctacaaccaggcgtggcacggcgtggtgtcc
ttcctcaacgtggccaacaacgccatcctgagggcaggcctgccggcgggagctgacgcc
cggcattacggcatctcagcgtccaatcatcccctcaacttgaccaaggagcagctgtcc
ttcgtggccttggcctcgagctccaccgatgtggtggtgtccatctgcgtcatcttcgcc
atgtccttcatccccgccagcttcgtcctcttcctcatccaagagcgagtgagcaaaacc
aagcacctgcagttcgtcagcggcgtcaacccggccgtctactggttggccaatttcgcc
tgggatgcgtgcaactacgccattccgtgtgtcatcgtagtcatcatcttcctgtgcttc
caacaagaggcgtatgtctccgcacccaacctgcccgctctggttctgctactgcttttc
tacgggtggtcgatcacacctatgatgtatccagcgtcgttcgtattcagcgtgcccagc
accgcatatgtggtgctcacctgcgtcaacctcttcatcggcatcaatggcagtgtggcc
accttcgtcatggagctttttgacgaccgcgacgtgtcatacatcaatgacatcgtgaaa
caagtgctcctcatcttccctcacttctgcctgggccgaggactgattgacatggccaag
aaccaggccatggccaacctcttcagcggcttcggcgaggatcgcttcaaggagccgctt
agctgggagatggtgggcaagaatctgtgcgccatgtccatccaaggagctgtcatgttt
gccgtcactcttctcattcaatacaagttcttctgtaaacccaggtttatttcaaccaag
tcgtcatccgaggaagaagaggatgtggatgtagctcgcgaacgggagcgggtgtatgcc
gggaaggcccagaatgaccttttgaggatctatgatttgaccaaggtgtatccggggaag
cgcatccccgctgtggaccggctatgtgtgggcgtacctacagctgagtgcttcggcttg
ctgggaatcaacggggccgggaagacgaccacctttaagatgctgactggcgacatcccg
gcttccagtggcgaggccttcctcaatggatacagcatcaggacggaaatgagcgctgtg
caccagaacatgggctactgcccccagttcgatgccatcaatgacctgctgacaggccga
gagcatctggagttctacgccaggctgcgaggggttccggaaaaggaggttgcaatggtg
gccgagtggggcattcagaaattgggcctggtgaagtatgccaccaagccggccggcacc
tacagtggaggcaacaagcgcaaactttccaccgccatcgccttgatcggctgtcccccg
ctcatcttcctggatgagccgaccactgggatggaccccaaagcccggcgcttcttgtgg
gactgcatcctgagcgtggtcaaggagggacgctctgtcgttctcacctcacacagtatg
gaggagtgtgaagcgttgtgcacacgcatggccatcatggtaaacggacatttcaaatgt
ctcggcagcatccagcatctgaagagcaggttcggcgacggttacacggtgacggttcgc
gtgggcggccaccctccgctcctgaagccagtggaggactttgtggatcagacgttcccc
gggagcgtcctgaaggagaagcatcacaacaccctgcaataccagctgccggctggccag
ggggcgctggcgcacatcttccgacaattcaccgaccagcgaggcacactctgtgtggac
gactactccgtgtcgcaaaccaccctagaccaggtctttgtgaattttgcgagccggcag
catggtgaggacgactctcagagctacgataactcggtggacacctccgacgagctccag
atgcagtcggccgagacctccccggggtcctacaaggtctag
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integrated database retrieval system
