Hippocampus comes (tiger tail seahorse): 109520458
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Entry
109520458 CDS
T04969
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcq04515
]
109520458 (pcdh8)
Cell adhesion molecules [BR:
hcq04515
]
Cadherins
Protocadherins
109520458 (pcdh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
109520458
NCBI-ProteinID:
XP_019733252
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MRETRWLLLLVSLTSLAAVAKAKTVKYQTFEEDAPGTVIGNLAKDISASAYSSAGSRSSF
RMMKQFNSSFIRLRESDGQLSIGERIDRERICKHALQCLISFDVVSFSKEQFKLIHVELE
VKDINDNSPAFPRKESTTDISENTAVGTRIPLDFAVDEDVGANYIQSYQISVNSHFSIDV
LSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRSGTTRVNIKVKDYNDNSPVF
DRNSFSVDLPEDSPVGTLLLDLNAEDPDEGLNGEVVYGFGNQVPFEIRQLFKVDRKSGRL
TLESPIDFESKNTYEFDVQATDLGPNPSPAICKIVVQVQDVNDNAPEISITPMTSITAGI
AYITEAAAKESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSPLDRE
KIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNAPGAYVTT
VVARDLDLGPNGKVTYKLADTYFMGSPISTFVSLDPASGSLYALRSFNYEVMKQLELRIT
ASDGASPPLSGSANVFLRVVDQNDNAPAITHPALHNGSAEVLLPRDAPSGYVVTRVEARD
ADEGVNSELSFRLAASEASVFSVNKVTGDVYLNRVLSHDVDDTLSVTVTVSDNGRPALTS
TATLHFLIIAGSPPSDRTVYQAGGGGVVSAQWDLSVVIIVVLAGSCTLLLLAIILIATTC
NRHRGDKSGEDSDDSYGEKGTPERGRNHVAANPLLPVPHPHAAAGAVGFEGHSYSSQAHA
GGGDMCSASEDGSEVPCVYDSETNGKPRGNKHEGYSTLPGYGNGKEAVRPITIWKGNSYT
TISARDPAFSGKDSGKGDSDFNDSDSDVSGDTGLKKDSASVPPMGGPNALWACTSECKVL
GHSDRCWSPSAARANAAPSPAPTVSSFGSHSKTASLPRDPHRRDNYYQAHIPKTVGLQSV
YEKVLDREYDYVMITPTRPVRVQEVCSDVTIPVYTPSPTHCNNNDA
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaacaaggtggctgttgttgttggtctctttgacaagcctggcagccgtcgca
aaggcaaagacggtgaagtaccagaccttcgaggaagacgccccgggcacagtgatcggt
aacttggccaaggacatctccgcctcggcgtattcttccgcgggctcccgctccagtttc
cggatgatgaaacagttcaactcctctttcatccgtctgagggagagcgacgggcagctg
agcatcggggagaggatcgacagggagcgcatctgcaaacacgccctgcagtgcctcatc
tctttcgacgtggtaagtttctccaaggagcagttcaagctcattcacgtcgagctggag
gtcaaggacatcaacgacaactccccggcgttccctcgcaaggagtccaccacggacatc
tcggaaaacaccgccgtggggacgcgcatcccgctggactttgccgtggacgaggacgtc
ggggccaactacattcaaagctaccagatctcggtgaacagccacttttccatcgacgtg
ctgagcagggccgatggggttaaatatgcagagctggtgctcatgaaagagttggaccgg
gagactcaggcgtcttacgcgctcgaattggtcgcgatggacggcggcaacccgtcccgc
tcgggaaccacgcgcgtcaacatcaaggtgaaagactataacgacaatagccccgttttt
gaccgcaacagtttctccgtggacttgccggaagattccccggtgggcaccctgctgctg
gacctgaatgcggaggacccggacgaagggctgaacggcgaggtggtgtacggcttcggg
aaccaggtgcccttcgagatccgccagctcttcaaagtggacagaaaaagcggcaggctc
accctggaaagccccatcgactttgagagcaagaacacgtacgagtttgacgtccaggcc
accgacttgggtccgaaccccagcccggccatatgcaaaattgtcgtccaggtgcaagac
gtgaacgacaatgcgccagagatctccatcacgcccatgacgtccatcaccgcgggcatc
gcttacatcaccgaggcggcggccaaggagagttttgtggctctggtcagtacctcggac
agagattccggagccaacggccaagtgcactgcaccctctacggacacgatcacttcaga
ctgcagcaggcgtatgaagacagcttcatgatcgtcagcaccagtccgttggaccgggag
aaaatccccgagtataacctgacggtggtggccgaggatttgggctctcctcccttcagg
accatcactcaatacaccatccggctgacggacgagaacgacaacgcgccggtgttcagc
aagcccgtgtacgaggtggcggtggtggagaacaatgcgcccggtgcgtacgtcaccacg
gtggtggcgcgggacctggacttggggccgaacgggaaggtcacctacaaactggcggac
acttacttcatgggctcccccatttccacattcgtgtcgctggaccccgccagcggctct
ctttacgcgctgcggagcttcaactatgaggtgatgaagcaactggagctccgaatcaca
gccagcgacggcgcctccccgcccctctccggaagcgccaacgttttcctgcgggtcgtg
gaccagaatgacaacgcgccggccatcacccacccggcgctccacaacggctcggccgag
gtcctcctgccccgggacgcgccgagcggctacgtcgtcacgcgggtggaggcgcgggat
gcggacgagggcgtcaactccgagctttccttccggcttgccgccagtgaagcctccgtt
ttttccgtcaacaaagtcacgggggacgtctacctgaaccgggtgctcagccacgacgtg
gacgacaccttgagcgtgacggtgacggtgagcgacaacggcaggccggcgctcacctcc
accgccacgctgcacttcctcatcatcgccggctccccgccgagcgaccgcaccgtgtac
caggcgggcggcgggggcgtcgtgtccgcgcagtgggacctgtcggtggtcatcatcgtc
gtcttggcggggagctgcaccctcctgctgctggccatcatcctcatcgccaccacctgc
aaccgccaccgaggggacaagagcggagaggacagcgacgactcttacggggagaaaggc
acgccggagcggggcaggaaccacgtggccgcaaacccgcttctgcccgtgcctcatccc
cacgcggcggcgggggcggtgggctttgagggacactcgtacagcagccaggcgcacgcc
gggggcggcgacatgtgctcggcctcggaggacggcagcgaggtcccctgcgtttacgac
tcggagacaaacggcaaaccgagggggaataaacatgagggatattcaacactgcccggc
tacgggaacggaaaggaggccgtgaggccgatcaccatctggaagggcaactcttacacc
accatctccgccagggatcccgccttcagcggcaaagacagcggcaagggggacagcgac
ttcaatgacagcgacagcgatgtgagcggagacaccggcttgaagaaagatagcgcatct
gtccccccgatgggtggcccaaatgcattgtgggcttgcaccagcgagtgtaaggttctg
ggtcattcggatcgctgttggagcccctcagcggcgagagccaatgcggccccctccccg
gccccgaccgtctcctccttcggcagccactccaaaacggcctctttgcctcgggacccc
caccgcagggacaactactaccaagcgcacatccccaaaactgtgggcctccagagcgtg
tatgagaaggtgctggacagggagtacgactatgtcatgatcacgcccacgaggcccgtg
agggtccaggaggtctgcagtgacgtcactatccccgtgtacacgcccagtccgacgcac
tgtaacaacaacgatgcctga
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