Hippocampus comes (tiger tail seahorse): 109520485
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Entry
109520485 CDS
T04969
Name
(RefSeq) zinc finger BED domain-containing protein 1-like isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109520485
04121 Ubiquitin system [BR:
hcq04121
]
109520485
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109520485
Ubiquitin system [BR:
hcq04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109520485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Herpes_BLRF2
DUF630
Motif
Other DBs
NCBI-GeneID:
109520485
NCBI-ProteinID:
XP_019733293
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MDINNKASAESLAMFELKREPKEEVEDLEELVPKRGSRSSMVWLWFGFKASDMEQKTVIC
KTCRRQIATSDSNTSNLFYHLKTRHEELYIESVRLRESINGTSQPQSNGTKKTDQRARKE
SLTKFIPYDEQSRRHREITDAICDFIISEDTAFACTVEKKGFRALIKTLDPRYNMPDRKH
FSDVQLPRLYKECRAKVTEELRNVEYFALTTALWTCGVTRPYMTLTVHFINNDWLLTSRC
LQTVYFPEDHSEVMMTTVLREVLESWELREEMLICVTTDNATNSNSALQLDEWNRLQCFG
HRLQLAIESSLKTLSPQTQTDVQRAVEVCKQVTGTISNSFKRRCDLAKAQVDLDLPIHQL
KSESPTRWGSRQQMISRFIEQEKAVKQVLREDSKVRHLIPTRQDMKILESVNKALSPLME
FTDAFPGEEYVSVSYVKPVLHLFKQQILKSQDDDSPLTRTIKEGILNYLHDKYADDATEK
LLDMAMLLDPRFKTAYTKAERIDLMKTRAATEIELLVAGGETAATAASTPAPFADESELP
TAKKAKKSLSSYFKKAAAPNCQSTSKPSRAAVQLELTMYLQTADLDPEEDPRVWWRQHEL
HFPLVAKLAKKYLCIPATSFPSQQIFGASGNVVTWKRSWLKPERVDQLVFLSVNL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggatataaacaataaggcaagcgcggagagcttagcaatgttcgaactcaaaagggag
cccaaagaggaggtggaggacttggaagagttggtgccgaaaagagggagccggagttcc
atggtttggctttggtttggatttaaagcatcagacatggagcagaaaacggtcatctgt
aaaacatgccgccgtcaaatcgctacgagcgactctaacacgtcgaatctcttctatcac
ttaaaaacgcgacatgaagaactgtacatcgagagtgtgaggttgcgagaaagcataaac
ggcacatcgcaaccgcaaagtaacggaacgaaaaaaacagaccagagggctcgaaaggaa
tcgttgactaaattcatcccgtatgacgagcagtctcgcagacatcgcgaaattacagat
gccatctgtgatttcatcatatcggaagacacggcctttgcatgtactgtcgaaaaaaag
ggcttccgggcattgatcaaaacacttgaccccaggtacaacatgccagatcggaaacac
ttcagtgacgtccagctgcctcgcctctacaaagagtgccgcgcgaaggtgactgaagaa
cttcgaaacgtggaatatttcgcattgacaactgctctgtggacctgtggagtcacacgg
ccgtatatgaccctaacggtgcattttatcaacaatgactggctcctcactagccgatgc
ttacaaaccgtttacttccctgaagaccactcagaggtgatgatgaccaccgtcctcaga
gaagtacttgaatcctgggagctgcgtgaggagatgctcatctgcgtgaccacagataat
gcaactaatagcaatagtgcactgcagctggacgagtggaacaggctacagtgctttggg
caccgtttgcagctggcaatagagagcagcctgaaaacactgtcacctcaaacccaaacg
gatgtgcaacgtgcagttgaggtatgcaagcaggtgacgggtaccatctcaaattcattc
aagagaagatgtgacctggccaaggctcaagtggacctggacctgcccattcaccagctc
aagagtgagagccccacaagatggggctcgagacaacagatgatcagcaggttcatcgag
caggagaaagctgttaaacaggttctccgtgaagacagtaaagtgaggcatctgatccca
accaggcaagacatgaaaatcctggagtctgtgaacaaagcattgagccctctcatggaa
tttacagatgcctttcctggagaggagtatgtcagcgtgtcgtacgttaaacctgtatta
cacctcttcaagcagcaaattctcaagtctcaagatgatgactcaccgctcactagaacg
attaaagagggaatcctgaattacctccatgacaaatatgccgacgacgccactgaaaag
ctgcttgacatggccatgctgctggatccacgatttaaaacggcctacactaaggcagag
cgaatcgacctcatgaagacaagagccgctacagaaatagagttgctggtggccggaggt
gagacagcagcaacagctgcctccactccagcgccgttcgcagatgaatccgagctcccg
acagccaagaaagccaagaagagtttgtccagctacttcaagaaagcagcggcacccaat
tgccaaagcacgtcaaagccaagcagagcagccgttcaactggagctcaccatgtacttg
cagacagctgacttggatcccgaagaagatcctcgtgtatggtggaggcagcacgagctc
cactttccattagtcgcaaagcttgccaaaaaatacctgtgcatccccgcaactagtttt
ccctctcagcagatctttggtgctagtgggaacgtggtgacatggaagagatcgtggctc
aaacccgaacgagttgaccagcttgtcttcctatctgtcaacctgtaa
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