Hippocampus comes (tiger tail seahorse): 109520543
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Entry
109520543 CDS
T04969
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcq03036
]
109520543 (hfm1)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109520543 (hfm1)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Meiosis-specific proteins
Others
109520543 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
wnt
Motif
Other DBs
NCBI-GeneID:
109520543
NCBI-ProteinID:
XP_019733399
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MNKMLDSDDCALSLDNLFFEKPIVHKVKPLKRVVSPWQVEAPPSLSQIPATQVLQEEAES
LTTLYSLQQRLSNNLIERENEEIQDSAHSNCRPEGLWGGEGFRDLCHGPNQTSIDEGGHD
TDRGTISMKYLSVDDRKGPPLQRSLFKVPVSKRGGDSSNANDLCSSHTASGPQTFLSSVA
MATAPPPFQPPRVTFGQAAPPSPFQPASLLPPPLVSSAMSVNPPQQAARVERQDKGTMRA
LLPPAAPQPLHIQGTSGADILRPVSEIPAKFRQVFSEFPFFNYVQSKALDDILYTDKNFV
ACAPTGSGKTVLFELAIIHLLMETSEPWRGVKIVYMAPIKALCSQCFENWTKKFVPLGLN
CKELTGDTEIDDFFEIQDSHIILTTPEKWDSMTRRWKDNCLLQLVRLFLIDEVHVVKDAT
RGATLEVVVSRMKAVHAYRTIQNQDTDISMRFVAVSATIPNISDIADWLSNEKGPASYLA
LDESHRPVKLRKVVLGFPCNPNHTEFKFDLSLNYKMANIIQTYSDHKPALVFCSTRKGTQ
QSAAVLAKETRFVMVPEHKQRLMKYAQSLLDSKLKDLVMLGVGYHHAGVDASDRKVIEKA
FTLGDLPVLFTTRTLAMGVNLPAHLVVIKSTMQYVAGSCEEYSEVDLLQMIGRAGRPQFD
TSATAVIMTKMQTKDKHMKLMNGIEIIESSLHSHLVEHLNAEIVLQTISDVNMALDWIRS
TFLYIRALKNPEHYGFSAAIGKCGIEAKLQELCLKNLNSLSSINAITMDEDINIKPTEAG
RLMARYCIAFDTMLQFSNVSGTENLSDLIELVSKSQEFSDIQLRVTEKRPLNTLNRDKNR
TTIRFPMDGKIKSNDMKVNCLIQAHLGSISIQDFGLTQDTAKIFRNGMRISKCLSEYLSQ
HSKMGFSTLLNSLILAKCFRAKLWENSAYVSKQLDKIGQTLSTAMVNAGLTTFSKIEQTH
PREVELILNRHPPFGNQIREFVLHLPKYAITLEQLPRYGCNIAEIVVKVNLQNRELLLTK
RTAPGNHYVSLVIGDSDNNCVFQQKITDLMLLKSNTWSKKIEVVKASKGDEISVNLISSV
YVGLDIQQKFNVYYAGARSFETDNPSSMSHDSAGETPHQSAAKPHSAIKAAPLQENTTSS
TEQVGGQKRQCNHLCKNKDQCGHDCCKTGVTVARKRPASKAACFSSYLSDLRSRCDTLAP
TPVKRLKMKMTEHSVGVNMQQFSYKAKKLHTLSSDDAYHHNDSVVMMDRTAESSSQYQHH
MDDFDNDDVLFMDMHTAMEEPIQANVAPPTNQASVGWRNAGSHAARPWRVSNQSTRDNDE
ALSQIPSVSFDLGNDWDDWSDFDEETPVHASDTSLPQRQSAECTKTGYVAKSPCHPTPLA
LRSLSQNILNSPEPSPFAARQMSQTKDASMFGTGIATKSPERTNSSCVAPPTQRFNFFSL
DTIASDNSTTDSKEEEAFLGIFDGIF
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatgctggactcggatgactgcgccttgtccttggacaatctcttttttgag
aaacctatagtccacaaagtaaagccactgaaacgagtggtcagtccatggcaagtggaa
gcaccgccatctctttcccagattcccgccactcaggttttgcaggaagaggcagagtcg
ctcactaccctgtacagtctccaacaaagactgtcaaacaatctcattgagagggaaaat
gaagagatccaagacagcgcccacagcaactgtagacccgaaggcctttggggaggtgaa
ggttttagggacctctgtcatggtcccaatcagactagcattgatgaaggtgggcatgat
actgatcgaggaaccatcagcatgaagtatttatctgtggatgaccgaaaaggaccacct
ctgcagagaagcttgttcaaggttcccgtgtcaaagcgcggaggtgactcgtcaaatgca
aacgacctctgtagtagtcacacagcatccggaccacaaacttttctcagttcggttgcc
atggcaacagcgcctcctccttttcagccaccgagggtgacatttggccaagccgctcct
ccttcccccttccagccagcctcactcctcccccctcctctggtctcatctgcaatgagc
gtcaatcccccccagcaggcggcccgtgtagaaaggcaggacaagggcacaatgagagcc
ttgcttccacctgccgcgccccagccgctccacatccaagggacttcaggagctgacatt
ttgcgaccagtctctgaaatcccagctaagttcagacaagtcttcagcgagttccccttt
ttcaactacgtccagtctaaggctctagacgacattctttacacagacaagaactttgtg
gcatgtgctcctaccggatctggtaaaactgtcctgtttgaattagccatcattcacctg
ttgatggagacctccgagccctggagaggcgtcaaaattgtatatatggcccccatcaaa
gctctctgtagtcagtgctttgagaactggacaaagaagtttgttcctctggggctgaac
tgcaaggagctgacgggcgacacagagatcgacgacttctttgaaatccaggactcgcac
atcatcttgaccactccagaaaaatgggacagcatgaccaggaggtggaaggacaattgt
ctgctgcaattggtcagactcttccttatagatgaggttcatgtcgtgaaggatgcaacc
cgtggtgccactcttgaagtggtggttagcaggatgaaggccgtacatgcctacaggaca
atccagaatcaagacactgacatctcgatgagatttgtggctgtgtcagccaccataccc
aatatttccgatatagcagactggctgtccaatgagaagggtcctgcctcgtatctcgca
ttggatgaaagccaccgccctgtgaagttgaggaaagtggtgttaggattcccctgtaac
ccaaaccacaccgagttcaagttcgacttatcgctcaattacaagatggccaatatcata
caaacttactctgaccacaagcccgctttagtgttttgctccaccagaaaaggaacccag
cagtcagctgccgttttagcgaaggaaacgcgctttgttatggtccctgagcacaagcaa
aggttgatgaaatatgcgcagtcccttctggattccaaattgaaagatctggtgatgctg
ggagttggttaccaccacgccggagtggacgcctccgacagaaaagtgatagaaaaggcc
ttcactctcggagacctgcctgtcctgtttaccacgcgcactctggccatgggagtaaac
ctgcctgctcacctggtggtgatcaagtccaccatgcagtatgtcgcaggctcctgtgaa
gagtacagtgaggtggacctgctgcagatgattggccgggctggaagaccacagtttgac
acatctgccactgcagtgatcatgaccaagatgcaaaccaaagacaagcatatgaaactc
atgaatgggattgagattatcgagagcagtttgcacagtcacctagtggagcacctgaat
gccgagatagttctccaaaccatcagcgatgtcaacatggctctggactggatacgctcc
accttcctgtacattcgagcgctgaagaacccagaacactatggcttctctgctgccatc
ggcaaatgtggaattgaggcaaaactccaagaactctgtctgaagaacctcaactctctg
tcctctatcaatgcgatcacgatggatgaggacatcaatattaaacccacagaggctggc
cggttgatggcaaggtactgtattgcctttgacaccatgctgcagttcagcaacgtatcc
ggcacagagaatttgtctgacctaattgagctggtgtcaaagagccaagagttcagtgac
attcagctaagagtgaccgagaagaggcccttgaataccttaaaccgggacaagaacaga
acaaccattcggtttccgatggatggaaagatcaaaagcaatgatatgaaagtgaactgc
ttgattcaagctcatttggggtccatctcaattcaagattttggcctcacacaggataca
gcaaaaatattcaggaacggcatgcgcatcagcaagtgcctttctgaatacctgagtcaa
cattccaaaatggggttcagtactctgctcaactccctgatcttggccaaatgtttcaga
gcaaaactctgggagaactctgcgtatgtctctaaacagcttgacaagataggccaaact
ctgtcaactgctatggtgaatgctggacttactacgttcagcaagatagagcaaacccac
ccgagggaggttgagctgattctcaacagacatccaccatttggaaaccaaatcagggaa
tttgtcctgcacctcccaaagtatgcaatcaccttggaacagctgccgaggtacggctgc
aatattgctgagattgtggtgaaggtgaacctccaaaaccgagaactcctgctgaccaag
agaacagctccaggcaatcactatgtttctctggtcatcggagactccgacaacaattgt
gtcttccagcaaaaaatcaccgacctgatgctgctgaagagcaacacctggtcaaagaag
attgaagtggtgaaggcctcaaagggagatgagatcagtgttaatctcatcagctcggta
tatgttggcctagacatccagcagaaattcaatgtatactacgcaggagcacgctcgttt
gagacagataacccgagcagcatgtctcatgattctgctggggagacgccgcaccagtca
gcagcaaaacctcactctgctatcaaagctgcacctcttcaggaaaacacaacatcttcc
acagagcaagttggaggacagaaaagacagtgcaaccacctctgcaagaataaggaccag
tgtggccatgactgttgtaaaactggtgtaactgtggcccgcaagaggccggcaagcaaa
gctgcatgtttttcttcctatttgagcgacctgaggagcaggtgcgacacacttgcaccc
actccggtcaaacgactcaagatgaaaatgacagagcactctgtgggtgtcaacatgcag
cagttttcctacaaagctaagaaattacacaccttgtccagcgatgacgcataccaccac
aacgattccgttgtgatgatggatcgaaccgcagaaagttcttcgcagtatcagcaccat
atggatgactttgacaacgatgatgtcctatttatggacatgcacacagcaatggaggag
ccaatccaagctaatgttgcacctcctaccaaccaagcttccgtcgggtggagaaatgcc
ggatcacatgctgctagaccctggcgagtgtcaaatcagagcacgcgcgacaacgatgag
gcgttgtcccaaataccaagtgttagctttgacctcggaaacgattgggatgactggagc
gactttgatgaggagacaccggttcatgccagtgacacatcactgcctcaaaggcagtca
gctgaatgcaccaaaacaggttatgtggccaaatcaccgtgtcaccccactcccttggca
ctgaggtcactttcccaaaatattctcaacagtcctgaaccctctccttttgcagccaga
cagatgagccaaacaaaggatgcaagcatgttcggtacagggattgcaacaaagtcacca
gaaagaacaaattcaagctgtgtggccccaccaactcaaagattcaatttcttctcgctt
gacaccattgcgagtgacaacagcacgaccgacagcaaagaagaggaagcttttcttgga
atatttgatggtatattttag
DBGET
integrated database retrieval system
