Hippocampus comes (tiger tail seahorse): 109520795
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Entry
109520795 CDS
T04969
Name
(RefSeq) probable histone deacetylase 1-B isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
hcq03083
Polycomb repressive complex
hcq04110
Cell cycle
hcq04330
Notch signaling pathway
hcq04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109520795
03083 Polycomb repressive complex
109520795
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109520795
04350 TGF-beta signaling pathway
109520795
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109520795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcq03036
]
109520795
Enzymes [BR:
hcq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
109520795
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
109520795
HDAC complexes
Sin3A-HDAC complex
109520795
BRAF-HDAC complex
109520795
REST complex
109520795
SHIP complex
109520795
MiDAC complex
109520795
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
109520795
Heterochromatin formation proteins
Other heterochromatin formation proteins
109520795
Chromatin remodeling factors
NuRD complex
109520795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
109520795
NCBI-ProteinID:
XP_019733848
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
GEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSGGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGG
GGYTIRNVARCWTYETAVALDTSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRISIRAHDKRIACEEEF
SDSEDEGEGGRRNTANFKKAKRAKTEGEKESEEKEKKGEEETKEVKDEEKAPDEEKMDTS
KPKEESKTP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttagtcaaggaacaaagaaaaaagtttgctactattacgacggtgatgttgga
aattattactatggacagggtcatcccatgaagccccaccgcatccgcatgacacacaac
ttgctgctcaactatggcctctacagaaagatggagatatatcgtccacacaaagccagc
ggcgaggagatgaccaagtatcacagtgatgattacatcaaattcttgcgctccatccgt
ccagacaacatgtcagagtacagcaaacagatgcagcggttcaatgtaggagaagattgt
ccagtatttgatggcttgtttgagttttgccagctctcaggaggcggctctgttgccggt
gctgtcaagttgaacaaacagcagacagacatagcgatcaactgggcaggcggtctgcat
cacgccaagaagtctgaggcctctgggttttgctacgtcaatgatattgtcctggctata
ctggagttactcaagtaccaccagagagttctctacatagacatcgacatccatcatgga
gatggtgtggaggaggcattctacaccacagaccgtgtcatgactgtgtcattccacaag
tatggagagtacttccctggcactggtgacctgagagacattggtgctgggaagggcaaa
tattatgctgtgaattaccctctgagagatgggattgatgacgagtcttatgaagccata
ttcaagcctatcatggccaaggtaatggagatgtaccagcccagtgctgtggttctgcag
tgtggcgcagattctctgtcaggcgatagactcggctgctttaacctcaccattaaagga
catgccaagtgtgtggagtacatgaaaagcttcaacctgcctctcctcatgctgggagga
ggcggctacaccatccgaaatgtcgcacgctgttggacttatgaaaccgctgtcgctctc
gatacgtcaatcccgaatgaactcccatacaatgactactttgagtactttgggccagac
ttcaagctgcacatcagcccctccaacatgactaaccagaacaccaatgattacctggag
aagataaagcagcgtttatttgagaacctacgcatgctgccccacgctccaggggtacag
atgcaggccatccctgaagacgccgtacaggaggatagtggagacgaggaagaggaggat
cccaacaaacgcatctccatccgtgctcatgacaagaggatagcgtgtgaggaagagttc
tctgactcggaggatgaaggtgaaggaggtcgcagaaacacagccaacttcaagaaggcc
aagcgagccaagaccgaaggagagaaagagagtgaagaaaaggagaagaaaggtgaggag
gaaacaaaagaagtcaaagatgaggagaaggcaccagatgaggagaaaatggacacatca
aagccaaaagaggagtcgaagacaccttaa
DBGET
integrated database retrieval system
