Hippocampus comes (tiger tail seahorse): 109520890
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Entry
109520890 CDS
T04969
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04136
Autophagy - other
hcq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109520890 (atg13)
04136 Autophagy - other
109520890 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109520890 (atg13)
03029 Mitochondrial biogenesis [BR:
hcq03029
]
109520890 (atg13)
Membrane trafficking [BR:
hcq04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109520890 (atg13)
Atg1 complex
109520890 (atg13)
Mitochondrial biogenesis [BR:
hcq03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109520890 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
109520890
NCBI-ProteinID:
XP_019734007
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSTPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGVGHSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYDR
LSVLLKSLLAVTRVTPAYKLSRKQGHDYVILYRIYFGEVQMRGLGEGFQTVRIGVVGTPV
GTVTLSCAYRTNLALMSNRQFERSVPIMGIIVDHFVDPPCGSQRPANMGQPCNYRAPDDD
HGEAFAGVQDSQEVCTTSFSTSPPSQCICTLSPSPSKLSKALPLDNPQFPLVPGLVTHTL
YNSRLSYQPPLLAGTTELCHTAANPNQTLHAGKEDGVMLHPAQPYHATDAHLTLEHMPNT
PASCGDDDNLSHSGEGRRSASPSDPVESLNALTRKVGAFVNKPNTRLSASMDLPFAAFAP
RGLDSEDNDPMVHPPDSPSCMSPLQASLHSQGSEGSGQHDDFVMVDFRPAFSKDDLMPMD
LGTFYREFQNPPQLASLSLHISSQSMADDLVDSLPEKLAIYERNIDEFDAFVDMLQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacctgagtccacaggataaaaaagacttggataagttcatcaagttcttt
gccttaaagactgttcaggtgatagtgcaggctcgccttggtgagaagatatgtactcgc
tcgtcttcaacaccaactggctctgactggttcaatttagcaatcaaagacatccccgaa
gtcacccatgaagccaagaaagcattggctggccaacttccaggcgtgggacactcaatg
tgcgtggagatctctctaaagacttctgagggggactcgatggagttagagacttggtgc
ctggagatgaatgaaaagtgtgataaggacattaaagtgtcgtataccgtctacgaccgt
ttgtccgtccttctcaagtctctgctggccgtcacgcgagtaacgcctgcctacaaactt
tccagaaagcagggacatgactatgtgatattatacaggatctattttggggaagttcag
atgagaggattaggagaaggtttccagacggtgcgtattggtgttgtgggaactcccgtt
ggcactgtgacactttcttgtgcctatcgcaccaatctggctttaatgtccaacagacag
tttgagcggtctgtgcccatcatggggatcattgtggaccactttgtggaccctccctgt
ggcagccagcgacctgcaaatatgggtcagccttgcaactacagagcaccagacgatgat
catggcgaagcatttgcaggggttcaggattcacaggaggtttgcacaacttccttctcc
acttccccgccctcccagtgcatctgtacactgagtccttctccttctaaactgtctaag
gcccttcctctggacaatccacagtttccgctggttcctggtcttgtcactcacactctg
tacaattccaggctatcctaccagcctcctcttctagcaggaactactgagctttgccat
actgctgccaatccaaaccagacactgcatgccgggaaggaggatggggtcatgttgcat
ccagcgcagccttatcatgccaccgatgcacatctgacactggagcacatgcccaacacg
cctgccagctgtggagacgacgacaatttgtcccacagcggagagggaaggaggagtgct
tctccctctgacccagtcgagtcacttaatgcattgacgaggaaagttggagcctttgtc
aataagcccaatacacggctatcggcctcgatggacctgccatttgctgcatttgctccc
aggggcctcgactctgaggacaatgatccaatggtccatcctccagactctccttcctgc
atgtcccctctgcaggccagcctccattctcagggctcggagggctcagggcagcacgat
gactttgtcatggtcgactttcggcccgctttctcgaaagacgacttgatgccgatggat
ttaggaacgttctacagggagtttcaaaaccctccacaactggccagcctctcgcttcac
atcagttcccagtcaatggctgatgatcttgtcgactcgctgccagagaaactggccatc
tatgagcgaaacatcgacgagtttgacgcctttgtggatatgctccagtag
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integrated database retrieval system
