Hippocampus comes (tiger tail seahorse): 109521004
Help
Entry
109521004 CDS
T04969
Symbol
dhx16
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109521004 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcq03041
]
109521004 (dhx16)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109521004 (dhx16)
Spliceosome [BR:
hcq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109521004 (dhx16)
Complex C
U4/U6.U5 tri-SnRNP related factors
109521004 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
Cas3-like_C_2
Flavi_DEAD
AAA_30
PWI
SRP54
nSTAND3
Motif
Other DBs
NCBI-GeneID:
109521004
NCBI-ProteinID:
XP_019734146
UniProt:
A0A3Q2XXK9
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MGDLEQWVNDRLHDILGLSDRYVAQFMIGTARRATSSQDFVSRLQQTGTIDIDQSVTAFA
HELFDKIPRKQVVEKASRVLERQAIEMDRKNRTYTLVEDSDSAEDTVVEKQRGNKKKSKE
KDRVGSKRKNIRRKKESESSSEEEVPVRQSTKAKSSQDDNSTIKKEDEEEEEWEKEERER
LHDIEERDAFAERVKLRDKDKTRNIAERTDKKAYEEAQKRLKLAEDDQRNMLPELRKQSR
RDYLKKREEEKLEDLEAEIIDEEYLFASDDLTDREKKELEYKRTLRDLAKDYKKAGAKEL
EERKNRYYMPEEIRRKEVPQKELELVEEVPMELGGEQGRWEEERLKTASLSFGAKKEREQ
GMKRQQEKYQLILEEDEMIEFVSTAITMKGTLTEKEETPALSQSELKKQSMQEVRRSLPI
FPYREDLLAAIHEHQVLVIEGETGSGKTTQIPQYLLEDGFTKGGMKIGCTQPRRVAAMSV
AARVAQEMNVKLGNEVGYSIRFEDCTSERTVVKYMTDGMLLREFLTEPDLASYSVIIIDE
AHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSTFFDDAPIFRIPGRRFPVDI
FYTKAPEADYMEACVVSVLQIHVTQPPGDILVFLTGQEDIETCCEQLQDRCRRLGSKIAE
LLVLPIYANLPSDMQAKIFSPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKNYI
ARTGMESLIVMPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEEMTVPEIQRTNLG
NVVLLLKSLGINDLLHFDFMDPPPHETLLMALEQLYALGALNHLGELTTLGRRMAELPVD
PMLSKMILASEQYKCSEEVLSIAAMLSVNNSIFYRPKDKAVHADNARMNFVVPGGDHLVL
LNVYTQWVESGYSTQWCYENFIQFRSMRRARDVRDQLEGLMERIEVEMVSSQGESMPIRK
AVTAGYFYHTARLSKGGYRTVKHQQTVYIHPSSSLFEEQPRWLIYHELVMTTKEFMRQVV
EIESGWLLEVAPHYYKSKEVEDSSSKKMPRKQGKAKEELG
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccttgagcagtgggtcaacgaccggctgcatgacatcttaggcctgagcgac
cgatacgttgctcagttcatgatcggcactgcccgcagggcgaccagctcccaggacttt
gtgagtcggctccagcaaacgggcaccatcgacatcgaccagagcgtcactgcctttgct
cacgagctttttgacaagattcctcgtaagcaggtcgtggaaaaagcttcccgggtgttg
gagcgccaggccattgagatggacaggaagaatcgcacgtacactttggtggaggatagc
gacagtgccgaggacactgttgtggagaagcagcgcggaaataagaagaagagcaaagag
aaagacagagtcgggagcaaaaggaagaacatccggcggaagaaggagagcgagtcatcc
agcgaagaagaagtgcctgttcggcaatccacaaaggctaagtcaagccaggatgacaac
tcaaccatcaagaaagaggatgaggaagaagaggagtgggagaaggaggagcgggagcga
ctccatgacatcgaggagcgtgatgcttttgcggagcgtgttaaattgagagacaaagat
aagacgagaaacatcgcggagaggacggacaaaaaggcttacgaggaagctcagaagaga
ctgaagttggcagaagatgatcagagaaacatgttgcccgaactgaggaagcagtcccgc
cgcgactacctgaaaaagcgcgaggaggaaaagctggaggacctggaggcggaaatcatc
gacgaggagtacctattcgcctccgatgacctgacggatcgtgagaagaaggagctggag
tacaagcgcacgctgcgagaccttgccaaggactacaaaaaggctggagccaaggagctg
gaggagaggaagaacagatactacatgccggaggagatcaggagaaaggaggtgccccag
aaagagttggagctggtggaggaggtgcccatggaactcggcggtgagcagggccgctgg
gaggaggagcggctcaagacggcctcgctcagcttcggtgcaaagaaggagcgcgagcag
ggcatgaagcgccaacaggagaagtaccagctcatcctggaggaggacgagatgatcgaa
tttgtcagcaccgccatcaccatgaaagggactctgactgagaaggaagagactccggcc
ttgtcccagtcagagctgaaaaagcagtccatgcaggaggtccgccgcagcctccccatc
ttcccctaccgagaagatctgctggccgccatccacgagcaccaagtcctagtcattgag
ggcgagacgggctcaggaaagaccacccagatcccgcagtacctcctggaggatggtttc
accaaaggagggatgaagattggatgcacgcagccccgcagagtggctgccatgtcagtg
gctgcccgggtggcgcaggaaatgaatgtcaagcttggtaacgaggtgggctacagtatc
cgctttgaggactgcacatcagagaggacggtggtcaagtacatgacagatggcatgctg
ctacgagagtttctcaccgagcccgacctcgccagctatagtgtgatcattatcgacgag
gctcatgagcgaactcttcacacggacatcctgtttggcctgatcaaagacatcgccagg
ttccgacccgacctgaaggtgctggtggccagtgccaccctggacacggagcgcttctcc
accttctttgacgacgcgcccattttcaggatccctggcaggagattccccgtggacatc
ttctacactaaagctccggaggccgactacatggaagcgtgtgtggtgtcagtgctgcag
atccatgtcacacaacctcccggagacattctggttttcctcaccggacaggaggatatc
gagacgtgttgcgagcaactccaggacagatgtcggcgactcggctccaagatcgccgag
ctgctcgttcttcccatctatgccaatctcccctctgacatgcaggccaagatcttcagc
cccacgccgcctggcgcacggaaggtggtggtggcgaccaacattgcggaaacttcgctg
acaattgacggcatcatctatgtcatcgatccaggcttctgcaagcagaagaattacatc
gcccgtactggcatggaatcgctcattgtcatgccctgctctcgggcgtcggccaaccag
agagcaggccgtgccggcagagtggccgccggcaaatgctttcggctctacacggcgtgg
gcctttaaacacgagatggaagagatgaccgtgcccgagattcagaggaccaacctggga
aatgtagtgttgctgctcaagagcttaggtatcaatgacctcctccactttgacttcatg
gaccctccgccgcacgagacgcttctgatggctctggagcagctttatgccctcggagca
ctcaaccacctaggagagctcaccacgctgggtcgcaggatggccgagctgcccgtggat
cccatgctgagcaagatgatccttgcctctgagcagtacaagtgttctgaggaggtactt
tcaatcgctgccatgctgtcagttaacaactcgatcttctaccggcccaaggacaaggcg
gtgcatgctgacaatgccagaatgaattttgtagtgcccggcggtgatcacctggtgctg
ctgaatgtgtacacacagtgggtggagagcggctactcaacacagtggtgctacgagaac
ttcatccagttccgctccatgagacgagcgcgggacgtacgtgaccaattggagggcctc
atggagcgcatagaggtggagatggtcagctcgcagggtgaatccatgcccattcgcaag
gcggtgacggcaggctacttctaccacactgcgcggctgagcaaaggaggatacagaacg
gtgaagcatcagcagacagtctacatccaccccagcagttcgctgtttgaagagcagcct
cgatggctcatctaccacgagttggtcatgaccaccaaggagttcatgagacaggtggtg
gagatagagagcggctggcttcttgaagtggctcctcactactacaagagcaaggaagtg
gaggacagcagtagcaagaagatgcctcgcaagcagggcaaagccaaggaggagctgggc
tga
DBGET
integrated database retrieval system
