KEGG   Hippocampus comes (tiger tail seahorse): 109521175
Entry
109521175         CDS       T04969                                 
Symbol
npc1
Name
(RefSeq) Niemann-Pick C1 protein
  KO
K12385  Niemann-Pick C1 protein
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
hcq04142  Lysosome
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    109521175 (npc1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    109521175 (npc1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hcq02000]
    109521175 (npc1)
Transporters [BR:hcq02000]
 Solute carrier family (SLC)
  SLC65: NPC-type cholesterol transporter
   109521175 (npc1)
SSDB
Motif
Pfam: NPC1_N Sterol-sensing NPC1_MLD Patched MMPL ACR_tran
Other DBs
NCBI-GeneID: 109521175
NCBI-ProteinID: XP_019734395
LinkDB
Position
Unknown
AA seq 1291 aa
MGFVPDRGGFYLLLLLLFLSEVHFRWAAAQHCVWYGECAESDKVPGKKYNCNYTGTPKPL
DPEGYDLLLELCPGYDYVVNPADDTAAAQHCVWYGECAESDKVPGKKYNCNYTGTPKPLD
PEGYDLLLELCPGYDYGNRELCCNVDQLRTLKASLQLPLQFLSRCPSCFFNLMNLFCELT
CSPHQSQFMNATKFEYTNSTEFNSSSVVEVQYYIGQTFSNAMYNACRDVQAPSSNVPALS
LLCGKTAQYCNATNWIQYMFDINNGQAPFPIVPIFTDVPVFGYTPMNNKTYGCSEGLDDG
SGPCSCQDCTKECGPKPLPPPVPPPWTIIGVDAMTVIMWISYITFLFVFIGTVLAAWCYR
KRTILSEYGPILDSNNPLSLNSDNPEAVNASCCETLGERFENALRAIFSSWGSFCVRYPG
SVILGSLLLVTASSGGLVYMRITTDPVELWSSPGSQARQEKDYFDSHFGAFYRTAQLIIT
TPLNETFTYKPYFGGSDVPFGAILDKDILHQVRWRMERISVQKKEGERELVWNTFLSYSA
PASLNDTTLLHDPCLGTFGGPVFPWLALGGYDSTNYNNASALVITFPIHNSRNDTDRLGQ
AQAWEKEFIRFMKDFHNPNLTIAFSSERSVEDEINRESNSDISTVVLSYAIMFVYISLAL
GHINSCRRLLVDSKISLAIAGILIVLSSVASSLGIFSYVGIPLTLIVIEVIPFLVLAVGV
DNIFIIVQTYQRDERLPQEELHQQIGRILGDVAPSIFLSSFSETVAFFLGALSNMPAVRT
FSLFAGLAVFIDFLLQISCFVSLLGLDLKRQEANRLDIICCAKLPEGQETRTDSILFRFF
KKVFAPLILKEWVRPIIVAVFVGVLSFSIAVVNKVEIGLNQQLSMPDDSYVLEYFKNLSQ
YLHTGAPVYFVVEDGLNYSSLEGQNAVCGGVGCNNNSLVQQVYSASLISNYSTIAVTPSS
WLDDYFDWVKPRSTCCRYNNATGAFCNASVVDPSCVHCRPSTQSGKQRPLGDDFMRFLPM
FLSDNPNVKCGKGGHAAYATAVDVFPNNTQVGASYFMTFHTILKESSDYIDALKMARILA
DNISQTMDHKVFAYSVFYVFYEQYLTIVYDTAFQLSVSLGAIFLVTTVLLGFELWSAVLV
CITIAMILVNMFGVMWLWSISLNAVSLVNLVMACGISVEFCSHLVRAFSVSMKKSRVDRA
EEALAHMGSSVFSGITLTKFGGILILALSKSQIFQVFYFRMYLAIVLLGATHGLIFLPVL
LSYIGPSTNRAKLLAANKRFIGTERERLLNY
NT seq 3876 nt   +upstreamnt  +downstreamnt
atgggcttcgtgccggacagaggtggcttctatcttctcttgctgcttctgtttctttcg
gaggtccactttagatgggcggcagcacaacactgcgtgtggtatggcgagtgtgctgag
tccgacaaggtccccggaaagaaatataattgtaactacacaggaaccccgaaacctctg
gaccccgagggctacgacctcctcttggagctttgtcctggttatgactatgttgtaaac
ccagcagatgacactgcggcagcacaacactgcgtgtggtatggcgagtgtgctgagtcc
gacaaggtccccggaaagaaatataattgtaactacacaggaaccccgaaacctctggac
cccgagggctacgacctcctcttggagctttgtcctggttatgactatggcaaccgcgaa
ctctgctgcaatgtggatcagttgcgtactctcaaagcgagtctccagctgccccttcag
ttcctgtcccgatgtccctcatgtttcttcaacttgatgaacctcttctgcgagttgacg
tgcagcccgcaccagagtcaattcatgaatgccaccaagtttgagtacacaaattccacc
gagttcaacagctccagcgtcgtggaggttcagtactatatcggacaaacattctccaac
gccatgtacaacgcctgccgggatgtacaagcgccgtccagcaacgtgccggccttgtcc
ctgctctgcggcaaaaccgcccagtactgcaatgccaccaactggatccaatacatgttt
gacataaataatgggcaggctccttttcctatcgtaccaatattcacagatgtgccggtg
tttggctacaccccgatgaacaacaagacttacggctgttccgaaggcctggacgatggt
tcaggtccttgctcctgccaggattgtaccaaagaatgcgggcccaaacccctccctcca
cctgtcccgcctccttggaccatcattggagtggacgcgatgactgtcattatgtggatc
tcttacatcaccttcctgttcgtgtttatcggcacagtgctcgcagcgtggtgctacagg
aaaaggacaatcttgtcggagtatgggcccatattggatagtaataacccgttgtcgctc
aacagtgataatcctgaagcagtcaacgcatcgtgctgcgaaacgctgggagagcgtttt
gagaacgctctgcgggcgatcttcagctcatggggctcattctgcgtgcgctacccgggt
tcggtcattctgggcagcctgctcctggtgacggcgtcctcgggcggtctggtctacatg
cgcatcaccaccgaccccgtggagctatggtcgtcgcccggcagccaggcgcgccaggag
aaggactactttgacagccactttggggctttctacaggacggctcagctcatcatcacc
acgccgctcaacgagaccttcacctacaagccctactttggagggtctgacgtccccttt
ggagccattttggataaggacatccttcatcaggtgaggtggagaatggaacgaatatct
gttcagaaaaaagagggagagagagaattggtatggaacacgtttctgtcttacagtgca
ccggcatccctcaatgacaccactctcctccacgatccttgtctcggcacttttggaggt
cccgtcttcccttggctggcgcttggaggctacgactccaccaactacaacaacgcgagc
gctcttgtcatcacctttccgatccacaactcccgcaacgacactgacaggctgggccaa
gcccaagcgtgggaaaaagaattcatccgcttcatgaaggacttccacaaccccaatctg
accatcgccttcagctccgagaggagcgtcgaggacgaaatcaaccgggagagcaacagt
gacatcagcaccgttgtcctgagctacgccatcatgtttgtctatatctcgctagcgcta
ggacacatcaacagctgcagaagactgctggtggattccaagatttctctggccatagcg
ggcattctgattgtgctgagctcagtggcatcctcgctgggcatcttcagctacgttggc
atccccctcaccctcatcgtcattgaggtcatccccttcctggtgctggctgtcggtgtg
gacaacatattcatcattgtgcaaacgtaccagcgagatgagcggttgccccaggaggaa
cttcaccaacagataggtcgcatcctcggcgacgttgcacccagcatattcctgtcctca
ttttcagagactgtggccttctttctgggagcactgtccaacatgcctgcagttaggact
ttttccctctttgctggcctggctgttttcattgatttcctgttgcaaatcagctgcttt
gtcagccttctgggcttggatctgaagaggcaggaggcaaatcgtctggacattatctgc
tgcgccaagttgcctgaaggtcaggaaacaaggacagacagcatccttttccgttttttc
aagaaggtctttgcgccattgatcctcaaagaatgggtgcggcccatcattgtggctgtg
tttgtgggagtgttgtccttcagtattgctgtggtaaacaaagttgagatcggactgaat
cagcagctctccatgcctgatgattcatacgtgttggagtacttcaaaaacctgagtcag
tatctccacacgggagctccggtctactttgtcgtggaggatggcctcaactacagcagc
cttgagggccagaatgccgtgtgcggcggcgtaggctgcaacaataattccctggtgcag
caggtctattccgcgtcactcatcagcaactactccaccatcgccgtcacaccttcctcc
tggctggacgactatttcgattgggtcaagccacggtccacttgctgccgttacaacaat
gccacaggagccttctgtaacgcttcagtggtggacccatcgtgtgtacactgtcgacct
tcgacccaaagtgggaagcagaggcccctgggtgatgacttcatgcgctttcttcccatg
ttcctgtcagacaatcccaatgtcaagtgtggaaaaggcggccatgcagcctatgccacc
gcagtggacgtttttcccaacaacacccaggtgggcgccagctatttcatgacctttcac
accatcctgaaggagtcgtcggactatattgacgctttgaaaatggcccgcatcttagct
gacaacatcagtcagaccatggaccacaaagtctttgcctacagcgtcttctacgtgttt
tatgagcagtacctcaccatcgtgtacgacacagccttccaactgagcgtgtcgctgggc
gccattttcctggtcaccacagtgctgctgggctttgagctgtggtcagccgtgctggtg
tgcatcactatcgctatgatcttggtcaacatgtttggcgtcatgtggctgtggagcatc
agcctgaacgccgtctcgctcgtcaacttggtcatggcatgtggaatttctgtggagttc
tgcagtcatctggttcgggccttttccgtcagcatgaagaaaagcagagtggaccgggct
gaggaggcgctggcgcacatgggcagctcagtgttcagtggaatcacactgacaaagttt
ggcggaatcctaatcctggcgctgtccaaatcgcagatcttccaggtgttctacttccgc
atgtacttggccatcgtgctgttgggtgccacgcacggcctcatctttctgcctgtgctg
ctcagctacataggcccctcgaccaacagggcaaagttgcttgcggccaacaagcgcttc
atcggaaccgaaagggagcggctcctcaattactga

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