Hippocampus comes (tiger tail seahorse): 109521175
Help
Entry
109521175 CDS
T04969
Symbol
npc1
Name
(RefSeq) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
hcq04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
109521175 (npc1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109521175 (npc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcq02000
]
109521175 (npc1)
Transporters [BR:
hcq02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
109521175 (npc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
109521175
NCBI-ProteinID:
XP_019734395
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MGFVPDRGGFYLLLLLLFLSEVHFRWAAAQHCVWYGECAESDKVPGKKYNCNYTGTPKPL
DPEGYDLLLELCPGYDYVVNPADDTAAAQHCVWYGECAESDKVPGKKYNCNYTGTPKPLD
PEGYDLLLELCPGYDYGNRELCCNVDQLRTLKASLQLPLQFLSRCPSCFFNLMNLFCELT
CSPHQSQFMNATKFEYTNSTEFNSSSVVEVQYYIGQTFSNAMYNACRDVQAPSSNVPALS
LLCGKTAQYCNATNWIQYMFDINNGQAPFPIVPIFTDVPVFGYTPMNNKTYGCSEGLDDG
SGPCSCQDCTKECGPKPLPPPVPPPWTIIGVDAMTVIMWISYITFLFVFIGTVLAAWCYR
KRTILSEYGPILDSNNPLSLNSDNPEAVNASCCETLGERFENALRAIFSSWGSFCVRYPG
SVILGSLLLVTASSGGLVYMRITTDPVELWSSPGSQARQEKDYFDSHFGAFYRTAQLIIT
TPLNETFTYKPYFGGSDVPFGAILDKDILHQVRWRMERISVQKKEGERELVWNTFLSYSA
PASLNDTTLLHDPCLGTFGGPVFPWLALGGYDSTNYNNASALVITFPIHNSRNDTDRLGQ
AQAWEKEFIRFMKDFHNPNLTIAFSSERSVEDEINRESNSDISTVVLSYAIMFVYISLAL
GHINSCRRLLVDSKISLAIAGILIVLSSVASSLGIFSYVGIPLTLIVIEVIPFLVLAVGV
DNIFIIVQTYQRDERLPQEELHQQIGRILGDVAPSIFLSSFSETVAFFLGALSNMPAVRT
FSLFAGLAVFIDFLLQISCFVSLLGLDLKRQEANRLDIICCAKLPEGQETRTDSILFRFF
KKVFAPLILKEWVRPIIVAVFVGVLSFSIAVVNKVEIGLNQQLSMPDDSYVLEYFKNLSQ
YLHTGAPVYFVVEDGLNYSSLEGQNAVCGGVGCNNNSLVQQVYSASLISNYSTIAVTPSS
WLDDYFDWVKPRSTCCRYNNATGAFCNASVVDPSCVHCRPSTQSGKQRPLGDDFMRFLPM
FLSDNPNVKCGKGGHAAYATAVDVFPNNTQVGASYFMTFHTILKESSDYIDALKMARILA
DNISQTMDHKVFAYSVFYVFYEQYLTIVYDTAFQLSVSLGAIFLVTTVLLGFELWSAVLV
CITIAMILVNMFGVMWLWSISLNAVSLVNLVMACGISVEFCSHLVRAFSVSMKKSRVDRA
EEALAHMGSSVFSGITLTKFGGILILALSKSQIFQVFYFRMYLAIVLLGATHGLIFLPVL
LSYIGPSTNRAKLLAANKRFIGTERERLLNY
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgtgccggacagaggtggcttctatcttctcttgctgcttctgtttctttcg
gaggtccactttagatgggcggcagcacaacactgcgtgtggtatggcgagtgtgctgag
tccgacaaggtccccggaaagaaatataattgtaactacacaggaaccccgaaacctctg
gaccccgagggctacgacctcctcttggagctttgtcctggttatgactatgttgtaaac
ccagcagatgacactgcggcagcacaacactgcgtgtggtatggcgagtgtgctgagtcc
gacaaggtccccggaaagaaatataattgtaactacacaggaaccccgaaacctctggac
cccgagggctacgacctcctcttggagctttgtcctggttatgactatggcaaccgcgaa
ctctgctgcaatgtggatcagttgcgtactctcaaagcgagtctccagctgccccttcag
ttcctgtcccgatgtccctcatgtttcttcaacttgatgaacctcttctgcgagttgacg
tgcagcccgcaccagagtcaattcatgaatgccaccaagtttgagtacacaaattccacc
gagttcaacagctccagcgtcgtggaggttcagtactatatcggacaaacattctccaac
gccatgtacaacgcctgccgggatgtacaagcgccgtccagcaacgtgccggccttgtcc
ctgctctgcggcaaaaccgcccagtactgcaatgccaccaactggatccaatacatgttt
gacataaataatgggcaggctccttttcctatcgtaccaatattcacagatgtgccggtg
tttggctacaccccgatgaacaacaagacttacggctgttccgaaggcctggacgatggt
tcaggtccttgctcctgccaggattgtaccaaagaatgcgggcccaaacccctccctcca
cctgtcccgcctccttggaccatcattggagtggacgcgatgactgtcattatgtggatc
tcttacatcaccttcctgttcgtgtttatcggcacagtgctcgcagcgtggtgctacagg
aaaaggacaatcttgtcggagtatgggcccatattggatagtaataacccgttgtcgctc
aacagtgataatcctgaagcagtcaacgcatcgtgctgcgaaacgctgggagagcgtttt
gagaacgctctgcgggcgatcttcagctcatggggctcattctgcgtgcgctacccgggt
tcggtcattctgggcagcctgctcctggtgacggcgtcctcgggcggtctggtctacatg
cgcatcaccaccgaccccgtggagctatggtcgtcgcccggcagccaggcgcgccaggag
aaggactactttgacagccactttggggctttctacaggacggctcagctcatcatcacc
acgccgctcaacgagaccttcacctacaagccctactttggagggtctgacgtccccttt
ggagccattttggataaggacatccttcatcaggtgaggtggagaatggaacgaatatct
gttcagaaaaaagagggagagagagaattggtatggaacacgtttctgtcttacagtgca
ccggcatccctcaatgacaccactctcctccacgatccttgtctcggcacttttggaggt
cccgtcttcccttggctggcgcttggaggctacgactccaccaactacaacaacgcgagc
gctcttgtcatcacctttccgatccacaactcccgcaacgacactgacaggctgggccaa
gcccaagcgtgggaaaaagaattcatccgcttcatgaaggacttccacaaccccaatctg
accatcgccttcagctccgagaggagcgtcgaggacgaaatcaaccgggagagcaacagt
gacatcagcaccgttgtcctgagctacgccatcatgtttgtctatatctcgctagcgcta
ggacacatcaacagctgcagaagactgctggtggattccaagatttctctggccatagcg
ggcattctgattgtgctgagctcagtggcatcctcgctgggcatcttcagctacgttggc
atccccctcaccctcatcgtcattgaggtcatccccttcctggtgctggctgtcggtgtg
gacaacatattcatcattgtgcaaacgtaccagcgagatgagcggttgccccaggaggaa
cttcaccaacagataggtcgcatcctcggcgacgttgcacccagcatattcctgtcctca
ttttcagagactgtggccttctttctgggagcactgtccaacatgcctgcagttaggact
ttttccctctttgctggcctggctgttttcattgatttcctgttgcaaatcagctgcttt
gtcagccttctgggcttggatctgaagaggcaggaggcaaatcgtctggacattatctgc
tgcgccaagttgcctgaaggtcaggaaacaaggacagacagcatccttttccgttttttc
aagaaggtctttgcgccattgatcctcaaagaatgggtgcggcccatcattgtggctgtg
tttgtgggagtgttgtccttcagtattgctgtggtaaacaaagttgagatcggactgaat
cagcagctctccatgcctgatgattcatacgtgttggagtacttcaaaaacctgagtcag
tatctccacacgggagctccggtctactttgtcgtggaggatggcctcaactacagcagc
cttgagggccagaatgccgtgtgcggcggcgtaggctgcaacaataattccctggtgcag
caggtctattccgcgtcactcatcagcaactactccaccatcgccgtcacaccttcctcc
tggctggacgactatttcgattgggtcaagccacggtccacttgctgccgttacaacaat
gccacaggagccttctgtaacgcttcagtggtggacccatcgtgtgtacactgtcgacct
tcgacccaaagtgggaagcagaggcccctgggtgatgacttcatgcgctttcttcccatg
ttcctgtcagacaatcccaatgtcaagtgtggaaaaggcggccatgcagcctatgccacc
gcagtggacgtttttcccaacaacacccaggtgggcgccagctatttcatgacctttcac
accatcctgaaggagtcgtcggactatattgacgctttgaaaatggcccgcatcttagct
gacaacatcagtcagaccatggaccacaaagtctttgcctacagcgtcttctacgtgttt
tatgagcagtacctcaccatcgtgtacgacacagccttccaactgagcgtgtcgctgggc
gccattttcctggtcaccacagtgctgctgggctttgagctgtggtcagccgtgctggtg
tgcatcactatcgctatgatcttggtcaacatgtttggcgtcatgtggctgtggagcatc
agcctgaacgccgtctcgctcgtcaacttggtcatggcatgtggaatttctgtggagttc
tgcagtcatctggttcgggccttttccgtcagcatgaagaaaagcagagtggaccgggct
gaggaggcgctggcgcacatgggcagctcagtgttcagtggaatcacactgacaaagttt
ggcggaatcctaatcctggcgctgtccaaatcgcagatcttccaggtgttctacttccgc
atgtacttggccatcgtgctgttgggtgccacgcacggcctcatctttctgcctgtgctg
ctcagctacataggcccctcgaccaacagggcaaagttgcttgcggccaacaagcgcttc
atcggaaccgaaagggagcggctcctcaattactga
DBGET
integrated database retrieval system