Hippocampus comes (tiger tail seahorse): 109521221
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Entry
109521221 CDS
T04969
Symbol
vps4b
Name
(RefSeq) vacuolar protein sorting-associated protein 4B isoform X1
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03250
Viral life cycle - HIV-1
hcq03272
Virion - Hepatitis viruses
hcq04144
Endocytosis
hcq04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109521221 (vps4b)
03272 Virion - Hepatitis viruses
109521221 (vps4b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109521221 (vps4b)
09143 Cell growth and death
04217 Necroptosis
109521221 (vps4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109521221 (vps4b)
03400 DNA repair and recombination proteins [BR:
hcq03400
]
109521221 (vps4b)
Membrane trafficking [BR:
hcq04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
109521221 (vps4b)
DNA repair and recombination proteins [BR:
hcq03400
]
Eukaryotic type
Check point factors
Other check point factors
109521221 (vps4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIT
AAA
Vps4_C
AAA_lid_3
AAA_16
TIP49
AAA_14
AAA_5
RuvB_N
AAA_22
MIT_ATG38
DUF815
PglZ_2nd
AAA_18
IstB_IS21
AAA_2
nSTAND3
NPHP3_N
RNA_helicase
AAA_17
AAA_33
AAA_24
AAA_7
Mg_chelatase
PhoH
nSTAND_NTPase5
Parvo_NS1
TEBP_OB2-like
AAA_28
Sigma54_activat
bpMoxR
Torsin
YtxH
Motif
Other DBs
NCBI-GeneID:
109521221
NCBI-ProteinID:
XP_019734479
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MEPTNLQKAIAVAQKAAQEDQAGNYEEAIRSYKHAAKYFLHILNREPQGKDGNQKIREKC
KEYLDRAEELHEYLEYKEKAIDLASKAAQEDKAQNYEEALRMYQAAVQYFLHVVKYEAQG
EKAKQSIRAKCAEYLDRAEKLKEYLQKKEKAPPAKPVKESSDKGNDSDDADDPEKKKLQN
QLSGAIVMEKPNIKWDDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGT
GKSYLAKAVATEANNSTFLSVSSSDLVSKWLGESEKLVKNLFALARENKPSIIFIDEIDS
LCGSRSENESEAARRIKTEFLVQMQGVGNDNDGVLVLGATNIPWTLDSAIRRRFEKRIYI
PLPEEHARSFMFKLHLGSTPNSLTDSDFVTLGKKTDGYSGADISIIVRDALMQPVRKVQA
ATHFKRVNGPSRADPLIIVHDLLTPCSPGDPNAIEMTWIDVPGEKLLEPVVCMSDMLRSL
SNTKPTVNEQDLHKLKKFTEDFGQEG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaccaatctgcagaaagccatcgcagtggcgcagaaggccgcgcaagaagac
caggcggggaactatgaagaggccattcgctcctataaacacgctgccaagtactttctc
cacattttaaatcgtgaaccacagggtaaagatggcaatcagaaaatcagagaaaaatgt
aaggagtacctggatagagcggaagaactacacgagtacctagagtataaagagaaagcc
attgatcttgccagcaaggcggctcaggaggataaagctcagaattatgaggaggctctg
cggatgtaccaggcagctgtacagtacttcctccatgtggtcaaatatgaagctcaaggt
gaaaaagcgaaacagagcatccgcgcaaaatgtgccgaatatttggatcgggcagagaag
ttgaaggagtatctccaaaagaaagagaaagctccacctgctaaacctgtcaaagagtcg
agtgacaaagggaatgatagcgatgacgctgatgatccagagaagaagaagttgcagaat
caactctcgggtgcaattgttatggaaaagccaaacatcaagtgggatgatgttgccggc
ttagagggcgccaaggaagccctgaaagaagctgtgattctccccattaaattccctcat
ctatttacaggcaagagaacaccatggaggggcatcctgctctttggacctccgggtaca
ggaaagtcttaccttgcaaaagctgtcgccacagaggccaacaactcgaccttcctgtct
gtctcctcgtctgatcttgtttccaaatggttgggagaaagtgagaagttagttaagaat
ctgtttgccctcgcgagagaaaacaagccctccattatcttcattgatgagatcgactcc
ctctgcggctccaggagcgagaacgagagcgaggcggcgcgacgtatcaagacagagttc
ctggtgcagatgcaaggtgttggaaatgacaatgacggagtgctggtactcggggcgaca
aacattccgtggaccctagactctgccatcagaagaagatttgagaagaggatctatatt
ccactgccagaagagcacgctcgcagcttcatgttcaagctccacctgggctccaccccc
aacagtctgaccgactctgattttgtcacactgggcaagaaaacagacggctactcaggc
gcggatatcagtatcatcgtgagagatgcgctcatgcagcccgtccgaaaggtccaggcg
gcaacccactttaaaagggtgaatggaccatcgagagcggaccccctaataattgtacac
gatctcttgacgccttgctcgcccggcgatcccaacgcaattgagatgacatggatcgac
gtccccggagagaagcttctggaacctgtagtttgcatgtctgacatgctgaggtctctg
tccaacaccaagcccaccgtcaatgaacaggatctccacaaactgaaaaaattcacagag
gactttggacaggaaggctag
DBGET
integrated database retrieval system
