Hippocampus comes (tiger tail seahorse): 109521358
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Entry
109521358 CDS
T04969
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04010
MAPK signaling pathway
hcq04020
Calcium signaling pathway
hcq04260
Cardiac muscle contraction
hcq04261
Adrenergic signaling in cardiomyocytes
hcq04270
Vascular smooth muscle contraction
hcq04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109521358
04020 Calcium signaling pathway
109521358
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
109521358
09153 Circulatory system
04260 Cardiac muscle contraction
109521358
04261 Adrenergic signaling in cardiomyocytes
109521358
04270 Vascular smooth muscle contraction
109521358
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcq04040
]
109521358
Ion channels [BR:
hcq04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109521358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
109521358
NCBI-ProteinID:
XP_019734754
LinkDB
All DBs
Position
Unknown
AA seq
1673 aa
AA seq
DB search
MADSNGPPLSSFIMDEETLKRKQKEKLKKLMATGGNPRPARSLLFLTLRNPFRRACISIV
EWKPFEIIILLAIFANCVALAVYLPMPEEDSNITNSNLESLEYIFLLIFSVECFLKIIAY
GFLFHADAYLRNCWNILDFVCVSVGLFTVAVDAINHISGVEPVVGEKGGGFDMKALRAFR
VLRPLRLVSGVPSLQVVMNSILKSMLPLFHITLLVFFMVTIYSIMALELFKCKMHKTCYY
TGTDIIATVENEKPAPCAQAGNGRRCTINGTECRAGWPGPNHGITHFDNLGFSMLTVYQC
ITTQGWTDVLYWVNDAIGMEWPWIFFTTLILVGSYFVLNLVLGVLSGEFTKEREKAKSRG
EFQKLRETQQLDEDLKGYMEWITQAEVIDNDHEGQSLLPTENGGSQAGSVGKMDTMQLML
YYYKLGRKWNRWLRRKCRAYIKSKLFYWWVIMLVFFNTLAIATEHHKQSERLSNWQDTAN
NLLLFMFSLEMFMKMYALGLSSYFMSLFNRFDCFVVSTGIMELILVQMNIMSVMGISVLR
CIRLLRLLKVTRYWTSLSNLVASLLNSVRSIACLLLLLFLFIVIFSLLGMQVFGGKFNFS
NQPKPRSTFDSFPQALITVFQILTGEDWNTVMYDGIMAHGGPSMPGILVSIYFIILFVCG
NFILLNVFLAIAVDNLAEAESLTLAQKEKAEDKKRKKALRANLPSKTSEEKAHLAKKLAE
QRAKGVEGIPTTAKLKIDEFESNVNEIKDPFPPADFPGDDEEEDPEIPDSPRPRPMADLQ
LKEEAVPMPEASSFFIFGPQNKFRKLCHRIINATTFTNIILLFILLSSVSLAAEDPIDPM
SFRNQVLAYADIVFTSVFTAEIVLKMTTYGAFLHKGSFCRNSFNILDLLVVSVSLLSMGM
ESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAVKTIGNIVLVTMLLDFMFACI
GVQLFKGKFYSCTDADKMTEEECRGWYIKYQEGALHEMEVRQREWTNSELNFDNIFNGML
ALFTISTFEGWPKILYKAIDSNVEDQGPVYNNRVAISIFFIIYLILIAFFMMNIFVGFVI
VTFQEQGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNSFQYQVWYIVTSCYFEYLMF
LLIMLNTMCLGMQHCDQSEHVKHLSGMLNVIFTVLFTVEMILKLMAFKAKGYFGDPWNVF
DFVIVIGSVIDVILSEIDAALVSSGGLYCLQGCDEADPMQAIASAENMSVSITFFRLFRV
MRLVKLLNRSEGIRNLLWTFIKSLQALPYVALLILMLFFIYAVVGMQIFGKIALVDGTYI
NRNNNFQTFPQSVLLLFRCATGEAWHEVMLASMYGKKCDAKSDFLPGEEFTCGSNFAIIY
FLSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPQHLDEFKKIWAEYDPEATGRIKHL
DVVTLLRRIPPPLGFGKFCPHRIACKRLVSMNMPLNSDGTVTFNATLFALVRTALKIKTE
GNFEQANEELRAIIKKIWKRTSMKLLDQVIPSIGDDEVTVGKFYATFLIQDYFRKMKKRQ
EEYYGYRPTKKNATNEIQAGLRNIEEEAASELHRTISGDLLNEDDMDRVTDEAVEEIFRR
QGSLFGNHSDPFVIDSDLASGNQAASQRPLQMAEGIINNTKDTAGRSDPHSAN
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagtaacggtccccctctatcgtccttcatcatggatgaagaaactctgaag
agaaaacagaaggagaagttaaagaaactgatggccactggcggcaatccgaggcctgct
cgctctctcctcttcttgacactcaggaatcccttccgtcgggcttgcatcagtattgtg
gaatggaaaccttttgaaatcattatccttctggccatttttgccaattgtgtggccctc
gctgtgtatttacccatgcctgaggaagacagcaacatcaccaacagcaatctggaaagc
ctggaatatattttcctcctcatcttctctgtggaatgtttcctgaagatcattgcctat
ggatttctttttcatgccgatgcgtacttaagaaactgctggaatattttagactttgtt
tgtgtatcagttggactctttactgtcgctgtggacgctattaatcacatcagtggagta
gaacctgtagtcggagaaaaagggggtggttttgatatgaaagcgctgagggctttcaga
gtccttcgaccactgaggcttgtgtctggagtcccaagtctgcaagtggtcatgaattcc
atcctaaagtccatgctgcccttgtttcacataactctactggtctttttcatggttact
atctactcgataatggctcttgagctattcaaatgtaaaatgcataaaacctgctactac
acaggcaccgacatcattgctacggtggagaatgaaaagcctgccccatgtgcacaggca
gggaatgggcgccgttgcaccatcaacggcacagagtgtcgggccggctggcctggccca
aaccacggcatcactcactttgacaacttgggattttccatgttgactgtgtaccaatgt
attactacacaagggtggactgatgtcctatactgggtgaatgatgcgattggaatggaa
tggccctggatctttttcaccacactcatcctggtcggttcctactttgtgctcaacctg
gttcttggtgtacttagtggtgagttcaccaaagaacgagagaaggccaagtcccgaggt
gagtttcagaagctgagagagacccagcagctggatgaagacctcaagggttatatggag
tggatcacccaagctgaagtcatagataatgaccatgaaggacagagtttgctccccacc
gaaaatggaggatctcaggcaggaagtgttggaaaaatggacacaatgcagttaatgttg
tattactataaactgggtcgcaagtggaaccgctggttacgccgtaaatgccgggcgtac
ataaagtccaaacttttctactggtgggtgattatgctagtcttcttcaatacgctagct
attgcaacggaacaccacaagcagtctgaaaggctctcaaactggcaagacactgccaat
aatctactgctgttcatgttttccctggagatgtttatgaagatgtacgctcttggcttg
tcttcgtacttcatgtcactcttcaatcgttttgactgctttgtggtgtccactggcatt
atggagctcatccttgtacaaatgaacattatgtcggtcatgggcatctcagtgctgcgc
tgcatacgcctgctgcgcttgctcaaagtcaccagatactggacctctctcagtaatctg
gtggcttcgctcttgaactcagtccgttccattgcctgcttgctgctgctgctcttcctt
tttattgtcatcttttcactgctgggtatgcaggtgtttggaggaaagttcaacttttcc
aaccaaccgaaaccgcgcagcacttttgatagcttccctcaagccctgataaccgttttc
cagattcttacaggagaggattggaatactgtcatgtatgatggtataatggcacatgga
ggacccagcatgcctggaatcctcgtcagcatctacttcatcatcctgtttgtctgtgga
aatttcattcttttgaatgtcttcctggccattgcagttgataatttggctgaggctgag
tctttaactttggcacagaaggagaaagcagaggataagaagcgaaagaaagcactcagg
gccaacttgcccagcaagacttccgaggaaaaagctcatcttgcaaagaagttagctgag
cagagagccaagggtgttgagggcatccccactacagctaagctcaaaattgacgagttt
gagtcaaatgtgaatgaaattaaagaccccttccctccagctgactttcctggtgatgat
gaagaagaggaccctgagatcccagacagcccgagacctcgtccaatggctgatcttcag
ttaaaagaagaagctgtaccaatgccagaagccagttcatttttcatctttggaccacaa
aacaagttccggaaactgtgccatcgcatcataaatgcaaccacattcaccaacatcatc
ctgcttttcatcctgctgtcatccgtttctttagcagccgaggatccgatcgacccaatg
tccttcaggaaccaggtgttggcgtatgctgatatagtcttcacttcagtgtttacggca
gagattgtactcaagatgacaacgtatggtgcctttcttcacaaagggtctttctgcagg
aactcttttaacattttggatctactggttgtcagtgtatcgttgctctcgatgggaatg
gaatccagtgccatctcagtggttaagattctcagggtgctgagggtacttcgaccgctg
agggccatcaatcgagcaaagggcctcaagcacgtggtccagtgtgtgtttgtcgctgtc
aagaccattggaaacattgtgctggttaccatgctacttgacttcatgtttgcctgtatt
ggggttcagcttttcaaggggaagttctattcctgcacagacgcagacaaaatgactgag
gaagaatgcagaggttggtatataaagtatcaggaaggagcacttcatgagatggaggtc
cgtcagagggaatggaccaactcagaactaaattttgataacatcttcaatggcatgctg
gcgctcttcaccatttctacatttgaaggatggccaaagatcctttacaaagccattgat
tcaaatgtagaggatcaagggccagtgtacaacaacagagttgccatctcaattttcttt
atcatctacctcatcctgattgcctttttcatgatgaatatattcgtgggcttcgtcatc
gttaccttccaggaacaaggagagcaagagtataaaaactgtgagctcgacaaaaaccag
cgccaatgtgtgcagtacgctcttaaggcccggccactacggtgttatattcccaagaac
tctttccaatatcaagtgtggtacatcgtcacctcctgctactttgaatacctgatgttc
cttcttatcatgctcaacaccatgtgcctgggaatgcagcactgtgaccagtcagaacat
gtgaaacacctatctggcatgctgaatgtaatttttactgtgctgttcactgtggagatg
atcctgaaactgatggccttcaaagcgaagggttactttggagacccctggaatgttttt
gactttgtcatcgtcattggaagtgtaatagacgtgattctgagtgaaattgatgcggcg
ctggtgtcctctggagggctttactgtctccaaggctgcgatgaagctgatcctatgcaa
gcaattgcgtctgcggagaatatgagtgtgtcaatcacattcttcagactgtttcgtgtt
atgcgtctggtgaaacttttgaatcgctctgaaggaataaggaatctgctatggaccttc
ataaaatcccttcaggctcttccctatgtggccctgctcattctaatgctgttctttata
tatgctgttgttggaatgcagatatttggtaaaattgctttggttgatgggacgtacatc
aacagaaacaacaacttccagacatttccacagtcggttttgctgttattcagatgtgca
actggtgaagcatggcatgaagtgatgctcgcaagtatgtatggaaagaaatgtgacgcc
aaatcagatttccttcctggagaagagttcacctgtggatccaactttgccatcatttac
tttctgagtttctacatgctctgtgcttttctgatcataaacctgtttgtggctgtcatt
atggacaattttgactatctgacccgtgattggtccattctgggcccccagcacttggat
gaattcaaaaaaatatgggcagaatatgatccagaggccacggggcgtattaagcatctg
gacgtagtgacacttctacggcgaattcccccacctttgggctttggcaagttttgtccc
catcgtattgcctgcaagaggctggtctccatgaacatgcctctcaacagtgatggaaca
gtcaccttcaacgcgacgctgtttgcattggttagaactgcactgaaaataaagacagaa
ggtaattttgaacaagccaacgaggagttgcgagcaattataaagaagatctggaagcgt
accagtatgaaactgctggaccaagtcattccatcaataggagatgatgaggtgactgtg
ggaaaattctatgccacattcttaatccaggattatttcaggaaaatgaaaaaaagacaa
gaggaatactatggttaccggccgacaaagaaaaatgcaacaaatgagatacaggcagga
cttcgaaacattgaagaggaggccgcttcagagctccatcggaccatctctggcgatcta
ctaaatgaggatgacatggacagagttactgatgaagctgtcgaagaaatattcaggagg
cagggcagtctttttggaaaccattcagatccctttgttatagacagtgatctagccagt
ggcaaccaggctgcaagtcaacggccactgcaaatggcagagggaatcataaacaacact
aaagatacagctgggagaagtgacccacattcagcaaattaa
DBGET
integrated database retrieval system
