Hippocampus comes (tiger tail seahorse): 109521577
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Entry
109521577 CDS
T04969
Symbol
pdzrn3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcq04121
]
109521577 (pdzrn3)
Enzymes [BR:
hcq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109521577 (pdzrn3)
Ubiquitin system [BR:
hcq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
109521577 (pdzrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Sina_ZnF
Prok-RING_4
zf-TRAF
zf-rbx1
zf-RING_6
GIY-YIG
PDZ_Tricorn
U-box
RING_XB3-XBAT31
IBR_1
Motif
Other DBs
NCBI-GeneID:
109521577
NCBI-ProteinID:
XP_019735050
UniProt:
A0A3Q2XU87
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MGFELDRFSGTVDPDLKCNLCNKVLEDPLTTPCGHVFCSGCVLPWVVQQSSCPVKCQRIS
SKELNHVLPLKNLILKLEIKCDNHVRGCAAVVKLQHLAEHAGMCDYSPAKCGNKGCDEVL
SLRDVDAHMRETCDFRAAGVCERGCGLTLTLKERRLDDHCCVRALKAHNGVLQYQMMCLD
SEFKKQTIEANKREKALLAQLSAAHAELQMTAVKYQKKFAEYSERIDSLTRTVTFSCKES
DTKSVPVVLLREGDSLGFNIMGGKPCADIHDGASNEGIFVSRIIESGPADKEDGLQIHDR
IIEVNGKDLSKATHDQAVEAFRTAKDPIMVQVLRRAPPPKLVSPTADTQLSDTSTQTDIT
LQHMMPLATLPPPAPPVTVLQDYLLPEGHPPGHEYFDPNDFLDGINQDIEREELEYEEVD
LYRANIQDKLGLTICYRTDDEDEAGIYISEIDPNSIAAKDGRIREGDKIVQINGIEIQNR
EVAVVLLTSEGNQNISLLVARPQMQLDEGWMDDDRNDFLDDLHMDMLEQQHRQAMQFTAS
MLQQKKHEEDGVTTDTATLLSNHHEKDSGVGRTDESTRNDESSEQENIADDHTTASNTLS
SCRKLTYSQDTLGSTDLPFSGESFISADYADADFLGIPADECERFRELLELKCQMRNGGL
QGLCSQGGGAEGQDQEVVDKELELLNEELRNIELECLNIVRAHKMQQLREQCRESWMLHN
SGFRNYNTSIDARRHELSDITEMPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLRRGP
EHQAGPSGSGGGLPKSLPCPLQEACGPSRGKALSKESDCPQAESKERKPGESGKPARGFA
QPRSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCRDASELGQKMEWKVKV
RSDGTRYITKRPIRDKLLRERALRIHEERCGMTTDDDAISELKMGRYWSKEERKQHAVRS
KEQRQRREFMKQSRADCLKEQLSPEDKKEPNIIELSNKKMMKKRNKKIFDNWMTIQELLT
HGTKSPDGTKVYTSLLSVTTV
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagctggaccgcttcagtggtacagtcgacccggatttgaaatgcaacctg
tgcaataaagttctggaagaccctctgactaccccgtgcggccacgtcttctgctccggt
tgcgttctgccttgggtcgtccagcagagcagctgccccgtcaaatgccagcggatctcc
tccaaagagctcaaccacgtcctgcctttgaaaaacctcatcctgaagctggagattaaa
tgcgacaaccatgtgcggggctgcgccgcggtggtgaagctgcagcacctggccgagcac
gccggcatgtgcgactactctccggccaagtgcgggaataagggatgcgacgaggtgctc
agcctgcgggacgtggatgcgcacatgcgggagacgtgcgactttcgcgcggcgggcgtc
tgcgagcgcggttgcggcttgacgctcacgctgaaagagcggcgactcgacgaccactgc
tgcgtgagagccctgaaggcgcacaacggcgtgctgcaataccaaatgatgtgcctggac
agcgagttcaagaagcagaccatcgaagccaacaagagggagaaagcccttctggcgcaa
ctgtccgccgctcacgccgagttgcagatgacggcggtgaaataccagaagaaattcgca
gaatacagcgagaggatcgactctctcaccagaacggtgactttctcctgcaaggaaagc
gacactaaaagtgtgccagttgtccttctccgtgagggcgactctctgggctttaacatc
atgggaggaaagccatgtgcggatattcatgacggcgcttcaaacgaggggatctttgtg
tccagaattattgagagtggaccagcagacaaggaggacggccttcaaatccacgaccgg
attattgaggttaatggcaaagacctctcaaaggcgacccatgaccaagcagtggaggcc
ttccgtactgccaaggatcccattatggtccaagttttgcggcgggcccctccgcccaaa
ctggtttcccccaccgctgacacccaactgtcagacaccagcacacagactgatatcacc
ctccaacacatgatgcccctcgccaccttgccaccgccagcgccgcctgtgaccgtgctc
caggactacctgcttccagaggggcatcctcctgggcatgaatactttgaccccaatgat
ttcctggatggtattaatcaagacatcgaacgtgaagagctggaatatgaagaggtagat
ctgtacagagccaacatccaagacaagctcggcctgacgatctgttacaggactgacgat
gaggatgaagctgggatctacattagtgagattgatccaaacagcattgccgccaaagat
ggcagaattagagaaggtgacaaaatcgtccagatcaacggcattgagatccaaaaccgt
gaagttgcggttgtgctgctgaccagtgaagggaaccagaatatctctctgctggttgcc
aggccacaaatgcagctggacgagggctggatggatgacgacaggaacgacttcctcgat
gaccttcacatggacatgctggagcagcagcaccgtcaggcgatgcaattcactgccagc
atgctgcagcagaagaagcatgaggaagatggagtgaccactgacacggcgacgctactc
tccaatcaccacgaaaaggacagcggggtcggccgcaccgacgagagcacacggaacgat
gagagttcagaacaggagaacatcgcagatgaccacacgacagcatcgaacacactgagc
agctgcagaaaactgacctacagccaagacaccctgggcagtacggacctgcctttcagc
ggcgaatccttcatctctgcggactacgccgacgccgactttctcggtatccccgcggac
gaatgcgagcgcttccgagaactcctggagctgaagtgccaaatgaggaacgggggactg
cagggcttgtgtagccaaggtggcggggccgaaggccaagaccaggaggtcgtggacaaa
gagctggagctgctcaatgaggagctgcgcaacatcgagctggagtgcctgaatatcgtg
cgcgcccacaagatgcagcagctccgggagcagtgtcgtgaatcctggatgctccacaac
agcggcttccgcaactacaacaccagcatcgacgcacgtcgccacgagctgtcagacatt
acagagatgccggagaaatctgacaaagacagctccagcgcctacaataccggcgagagc
tgccgcagcacccctcttacgttggagctgtccccggacaactccctccgacgtgggcca
gagcaccaagccgggccgtcgggctccggcggagggttgccgaaatctctcccgtgccct
ctccaagaggcttgcggccccagcaggggcaaggcgctttcaaaggagtcggattgcccg
caggcggaaagcaaggagaggaaaccgggagagtccggcaaacccgccaggggctttgct
cagccacgctcgccgtacaagcacgcgcacatccccgcccacgcccagcactaccagagc
tacatgcagctgatccagcagaaatccgccgtggagtacgcccaaagtcagatgagcctg
gtcagtatgtgtcgggacgcgagtgagctgggccaaaagatggagtggaaggtcaaggta
cgcagcgacggcacccgctacattaccaagcggcccattcgggacaagctgctgcgggag
cgcgccctgcgcatccacgaggagcgctgcggtatgaccaccgacgacgacgccatcagc
gagctgaagatgggccgctactggagcaaggaagagaggaagcagcacgccgtccgttcc
aaggagcagaggcaacggcgtgagttcatgaagcagagccgggccgattgcctgaaggag
cagctcagcccggaggacaaaaaggagcccaacatcatcgaactcagcaacaaaaagatg
atgaaaaagagaaataagaaaatattcgacaactggatgaccatccaggaactgctgacc
cacgggaccaagtcaccggatggcaccaaagtttacacctcactcttgtctgtgaccacg
gtctaa
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integrated database retrieval system
