Hippocampus comes (tiger tail seahorse): 109521716
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Entry
109521716 CDS
T04969
Name
(RefSeq) keratin, type I cytoskeletal 42-like isoform X1
KO
K07604
type I keratin, acidic
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109521716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hcq04812
]
109521716
04147 Exosome [BR:
hcq04147
]
109521716
Cytoskeleton proteins [BR:
hcq04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
109521716
Exosome [BR:
hcq04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
109521716
Exosomal proteins of other body fluids (saliva and urine)
109521716
Exosomal proteins of colorectal cancer cells
109521716
Exosomal proteins of melanoma cells
109521716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
CCDC39
RusA
Cep57_MT_bd
Rab11-FIP3
3-PAP
DUF5677
Plectin_PPL
SWI-SNF_Ssr4_C
DUF3450
Bacillus_HBL
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
109521716
NCBI-ProteinID:
XP_019735294
UniProt:
A0A3Q2YIC5
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MASSIRTGISSMSLSSLPVSGPRRAASLYTGSGRNVKISYGTGLSSGLDLGWSLGGGVMD
GSNFAFAGSEKVTMQNLNDRLATYLDKVRSLESANAKLERQIREWYDRQTPILRDYTKYE
AIIADLRKKISDAAQINARLMLQIDNARLAGEDFRIKFENELAVRMSVEADIAGLRKVVD
DLTVARTDLEMQVEGLKEELVYLKKNHAEEMAALRNQVNSCAVNVEVDARPQEDMSRTIE
EIRRQYEAITEKNRRDMDNWYKTKFDELNKQVANSTQILQTSRTEISELQRTLQALQIEL
QSQCSLRSAVESQLAETEARYALQLSQLQAVVNGLENELSQMRLDIERQASEYQVLLDIK
CRLEMEIAEYRRLLDGEDVKTIQIVKEVKSQPIITQRRRVVIEDMVDGRVVARKEDVDDV
RKN
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctcaatccgcacgggaatatcgtcaatgtccctgtcctctttgcccgtgtcc
ggcccacggcgggctgccagcctgtacaccggttctggcagaaatgtgaagatatcctac
ggcaccgggttaagttcaggcttggacctgggctggtcactcggcgggggcgtcatggat
ggcagcaacttcgccttcgccggcagcgagaaagtgaccatgcagaacctcaacgatcgc
ctggccacttacctggacaaggtgcgatccctggagagcgccaacgccaagttggagcgt
caaatccgcgagtggtacgacaggcagactcccattttgagagattacaccaagtacgag
gcaatcatcgctgacctgcgcaaaaagattagtgatgctgctcagatcaatgccaggttg
atgctgcagatcgacaatgcaaggctggcaggagaggacttcaggatcaagtttgagaat
gagctggctgtacgcatgtcagtggaggcagacattgctggactgcgcaaagtcgtggat
gatctgaccgtggctcgcactgacctggagatgcaagtggagggcctgaaggaagaactg
gtctacctgaagaagaaccatgctgaggaaatggcggcattgcgaaaccaagtgaattcc
tgcgctgtgaatgtcgaagtggatgccagaccgcaggaggacatgtccagaaccattgag
gagatcagaagacagtacgaggctatcactgagaagaaccgccgtgatatggacaactgg
tacaagaccaagtttgacgagttgaacaagcaagtcgccaacagcacgcagatccttcag
acctcccgcactgaaattagtgagctccagaggacattgcaagccctgcagattgaactc
caatcccaatgtagcctgagatctgctgtggagagtcagttggcggaaacagaggctcgt
tatgccctgcagctgagccagctccaggccgtcgtcaacggcctcgaaaatgagctcagc
cagatgaggttggacatcgagaggcaggcgtcggaataccaggtgttgcttgacatcaag
tgccggctggagatggagatcgctgaatacagaagactgttggatggagaagatgtcaag
accatacaaattgtcaaagaagtcaaatctcaaccaatcataacccaaagaagaagagtt
gtcattgaggatatggttgatggaagagtggtggcccgcaaagaagatgtggacgatgtc
cgcaagaattag
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