Hippocampus comes (tiger tail seahorse): 109521717
Help
Entry
109521717 CDS
T04969
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109521717 (smarce1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109521717 (smarce1)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109521717 (smarce1)
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109521717 (smarce1)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109521717 (smarce1)
PBAF complex
109521717 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
Pcf11_helical
CENPH
Motif
Other DBs
NCBI-GeneID:
109521717
NCBI-ProteinID:
XP_019735296
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMQNTAGFVGYNPYSHLAYNNYRLGGSQSSNSRVTNSSGINIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYE
AEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAEDPD
DYDDGFSIKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQDKKRKFIEATDSFTNELKRLCCMKVEVDMEKISAEISAAEEAARKRL
AEREKDAGDRGSKEAPTYVSGAAEEEKHGKSQPNSLNDSTNKGGENNELIGKDPSGKQKA
AEELQDQPGSEEGASEDKESVLEGAMEEGTSDSNTGSETTSAQTEDALTSEPSEGSGRAR
STH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaggccatcctatgctccaccccctccccctgcacctacaactcaaatgcag
aatactgcaggatttgtggggtacaacccttacagccatctggcctacaacaactacaga
ctgggagggagccaaagcagcaacagtcgggtaacgaattcctctggaataaatatacca
aagccacccaagccacctgataaaccactgatgccatatatgagatacagccgtaaggtt
tgggatcaagtaaaagcctccaatcctgatctgaagctatgggaaattgggaagataatc
ggtggcatgtggagggacctcactgatgaggagaaacaggattatttgaatgactacgaa
gcagagaagattgaatataatgaaagcatgaaggcctatcacaactcgccagcttacctg
gcctacgtcaatgcaaaaagccgcgctgaggcagcactagaagaagagagccgtcagcgg
cagtctagactggacaaaggcgagccatacatgagtattcagccagctgaggatccagat
gattatgatgatgggttttccataaagcactccgcagcagcccgttttcagcgcaaccac
cggctgattagtgagattctcagtgagagtgtagtgcctgatgtgcgttctgttgtcaca
actgcccgtatgcaagtgctcaaacgtcaggtccagtctttgatggttcaccagagaaag
ttggaagcagaattgcttcaaattgaagaccgccaccaggataagaaacgaaaattcatt
gaagccacagattcgttcacaaatgagctcaaaagactttgctgtatgaaagtggaagtg
gacatggagaagatatctgcagagatttctgcagcagaagaggcagcccgcaaacggctg
gctgaacgggagaaagatgcaggcgacagaggaagtaaagaggcccccacatatgtgtca
ggagcagcagaagaagaaaaacatggcaaatcccaaccgaattctctcaatgacagtacc
aacaagggaggtgagaacaatgagttgatcggcaaagatccatcagggaagcagaaggcc
gcagaggaacttcaagaccagccaggcagcgaagagggggcctcagaggacaaggagagt
gtccttgagggagccatggaggagggaaccagtgacagtaacacaggttcagaaaccacc
tctgctcagacagaagatgctctgaccagtgaaccatctgagggttccggcagggcaaga
tcaacccactga
DBGET
integrated database retrieval system
