Hippocampus comes (tiger tail seahorse): 109521885
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Entry
109521885 CDS
T04969
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109521885 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109521885 (cnot10)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109521885 (cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_14
ARM_TT21_N
ANAPC3
TPR_7
ARM_TT21
TPR_10
TPR_MalT
TetR_C_5
Motif
Other DBs
NCBI-GeneID:
109521885
NCBI-ProteinID:
XP_019735524
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MAENTEQNEAKHDNSSSPGMTDQEKEMAASAYESFVAKKYDESLRHLDALQELNKDDYKI
ALNKAIVEFYKSGQTTTGNLKQSLMAMKTQVHTATEDVDGLDDVENSLLYYNQAIIHYHM
RQYSEAISIGEKLYQFLEPFEEKFAQAVCFLLVDLYLLTFQPEKALHLLAVLDKLSVQGS
NKNGKGENNKDGGNQKAEFSAMIEAAKSKMHQYKVRAHIQMKSSKACKREIKSVMNTAGN
SAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPIKTGECVRCMFWNNLGCIHFAMGK
HNLGIFYFKKALQENDHTCAQLGDGGNGQAKKFTGIPMCALLANKRYELLYNCGIQLLHI
GRPLAAFECLIEAVQVYHSNPRLWLRLAECCISANKGGSEQESKGLPCKKGIVQSIVGQG
YHRKIVLASQSMQNTIYSEGQSAAIPVASMEFAAICLRNSLLLLPEHQQQDVKMENSSKS
SSQSGSTESGSENSDACSGKGQEADRLLSAAPSSPLRKQEVENLRCSILACSAYVALALG
DNLMALNHAEKLLHQPKVSGSLKFLGHLYAAEALISLDRISDAIAHLNPENVIDVSIGVL
TNEQDPAGSDKGDEPVESSGKQTPLCYPSSVTSARAMMLFNLGSAYCLRSEYDKARKCLQ
QAASMVNTKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPPAVQRVSPDSRKKPMQP
IQLPSSFTQVQRK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacacagagcaaaatgaggcaaagcatgacaactcatcatcacccggaatg
acagaccaagagaaagaaatggcagccagtgcatatgaatcgtttgtggctaagaagtat
gatgagtctttgagacaccttgatgctctgcaagagttgaataaagacgactacaagatt
gctttgaataaagccattgtagagttttacaaaagtggtcagactaccacaggaaacctt
aagcaaagcctaatggcaatgaagacccaggttcacacagccaccgaagatgttgatggg
ttggatgatgttgaaaatagtttgttgtactacaatcaagccattatccactatcatatg
cggcagtactcagaagccatttctattggggagaagctctaccaatttctggaaccgttt
gaagagaagtttgctcaggctgtgtgtttcctgctggtggatctgtacctgctcacgttc
cagccagagaaggccctccacctgttggctgtgctggataagctctctgtacaaggaagc
aacaagaacggcaaaggagagaacaacaaagatggtgggaaccagaaggcagagttttca
gccatgattgaggcagcgaaatcaaagatgcaccagtacaaagtaagagcccacattcag
atgaaatcctccaaagcgtgtaaaagggagataaagtcagtgatgaacacagcaggaaat
tctgcgccgtctcttttccttaagagcaactttgaatatctgagaggaaactaccggaaa
gcagtgaagctgctcaacagttccaatatagccgaacaccccggacccatcaaaacaggt
gaatgtgttcgttgtatgttctggaacaatcttggctgcattcactttgcaatggggaaa
cataacctcggaattttctacttcaagaaggcattacaagaaaacgaccacacttgtgca
cagctcggcgatggcggcaatgggcaagccaagaaattcacaggtatccccatgtgtgct
ctactagccaacaaacgctatgagcttctgtataattgcggcatccagctgctgcacatc
ggcaggcctctggctgccttcgagtgtctgattgaggcggtgcaggtttaccattcaaac
cctcgactgtggctacgacttgcggagtgttgcatctctgctaataaagggggttctgaa
caagagagcaaaggtttaccgtgtaaaaaaggcattgttcagtcaattgttggacaggga
taccatcgcaagattgtgttggcatcccaatccatgcaaaatactatttacagtgaaggc
cagtcggcagccattccagtagccagtatggagtttgctgccatttgcctaaggaactct
ctgctgctgctgcctgaacaccaacagcaggacgtcaagatggagaacagctccaaaagc
tcaagtcagtcaggaagcaccgagagtggcagcgagaacagtgatgcctgcagtgggaaa
ggtcaggaggccgacaggttactctccgcggcgccatcgtctcctctcagaaaacaagaa
gtggaaaacctcaggtgctccatcttggcatgcagtgcctacgtggccttagcactagga
gacaacctgatggctttaaaccacgctgagaaactgctccaccaacccaaggtttcggga
tcgctcaagtttctcggtcacctctacgcggccgaggccctcatttcattggaccggatc
tccgatgccatcgcgcacctcaacccagagaatgtcatcgacgtttctattggggtgctg
accaatgagcaagacccagcaggttctgataagggtgacgaacctgttgaatcttcaggc
aagcagacccccctttgttatcccagcagtgtgacttcagctcgagccatgatgctcttc
aaccttggcagcgcgtactgcttacgaagtgaatatgacaaagcccgcaagtgccttcaa
caggctgcatcgatggtgaacactaaggagattccacctgaagccatcttgttgggagtc
tacttggagctacagaatgggaatactcagctggccttgcagatcatcaaacgcaaccag
ctgctgcctcctgcagtccagagggtgtcgccagattcccgcaagaaacccatgcagcca
atccagcttccctcatcgttcacacaagtccagcgtaaatga
DBGET
integrated database retrieval system
