Hippocampus comes (tiger tail seahorse): 109521941
Help
Entry
109521941 CDS
T04969
Symbol
seh1l
Name
(RefSeq) nucleoporin SEH1
KO
K14299
nucleoporin SEH1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03013
Nucleocytoplasmic transport
hcq04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109521941 (seh1l)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109521941 (seh1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109521941 (seh1l)
04131 Membrane trafficking [BR:
hcq04131
]
109521941 (seh1l)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109521941 (seh1l)
Membrane trafficking [BR:
hcq04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
109521941 (seh1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Caudo_TAP_N
Motif
Other DBs
NCBI-GeneID:
109521941
NCBI-ProteinID:
XP_019735650
UniProt:
A0A3Q2YHY4
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSENGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MFAVGSDDGNVTYGGKVQIYEYNENTRKYAKAETLATITDAVHDTAFAPNLGRSFHVLAI
ATKDVRIFKLVPLRKESTSTGPTKFEVQIVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPLTGSSGQPTVMRTVVGSSAQASQNALNGISAGRYFF
PPLDPPRAATGHGHLLPPPSLIEHCDVEHNQPQQQSVSCRLSSRSLVSLSESDGQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttgcacgcagcattgcagcagatcataaagatctgattcatgatgtgtcgtat
gattttcatggtcggagaatggcgacttgttccagtgaccaaagtgtcaaagtgtgggac
aagagtgagaacggagaatggcactgtactgccagctggaagacgcatagtggatccgtg
tggagagtgacctgggctcatccagaatttggacaagttcttgcttcatgctcctttgac
aggacagcggctgtctgggaggagatagtaggagagtcaaatgacaaacagagaggacag
agccattggataaaaagaaccacacttgtggacagtagaacatcagtgaccgatgtgaaa
tttgctcctaaacacatgggcctaatgctgaccacgtgttcagcggacggagttgtgagg
atctatgaggctccagacgtcatgaacctgagtcagtggtccctgcagcatgaaatctct
tgcaaactcagctgcagctgcatttcttggaacccgtccagctcccgcgcccacccacca
atgtttgcagtggggagtgacgacggcaacgtgacgtatggtggcaaagtccagatctat
gagtacaatgaaaacacaagaaaatatgccaaagctgagactctggcgaccatcacagat
gcagttcatgacactgcatttgctccaaacctgggacgatctttccatgtcctcgccatt
gcaacaaaagatgtccgaatctttaagcttgtccctttaaggaaggagagcacctcgaca
ggacccaccaagtttgaggtgcagattgtcgcccagtttgataaccacaactcccaagtg
tggcgtgtgagctggaacatcaccagcaccttgctggcctcttctggggatgatggctgc
gtgcgtctatggaaagccaactacatggacaactggaagtgcacaggcatcctgaaggga
gacggcagcccgctaactggttcatctggtcagcccacagtcatgagaactgtggtgggc
tcctctgctcaggcctcccagaatgcactaaatggaatttccgcaggaaggtatttcttt
ccgcctctggatccccccagagctgcaaccgggcatggtcacctgctgcctcccccctca
ctcatagagcactgtgatgttgagcacaatcagcctcagcagcagtccgtatcatgcaga
ctttcctccagatcattggtgtccttgtccgagtctgacgggcagtaa
DBGET
integrated database retrieval system