KEGG   Hippocampus comes (tiger tail seahorse): 109521941
Entry
109521941         CDS       T04969                                 
Symbol
seh1l
Name
(RefSeq) nucleoporin SEH1
  KO
K14299  nucleoporin SEH1
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03013  Nucleocytoplasmic transport
hcq04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109521941 (seh1l)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    109521941 (seh1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcq03019]
    109521941 (seh1l)
   04131 Membrane trafficking [BR:hcq04131]
    109521941 (seh1l)
Messenger RNA biogenesis [BR:hcq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109521941 (seh1l)
Membrane trafficking [BR:hcq04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    109521941 (seh1l)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_TEP1_C Caudo_TAP_N
Other DBs
NCBI-GeneID: 109521941
NCBI-ProteinID: XP_019735650
UniProt: A0A3Q2YHY4
LinkDB
Position
Unknown
AA seq 415 aa
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSENGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MFAVGSDDGNVTYGGKVQIYEYNENTRKYAKAETLATITDAVHDTAFAPNLGRSFHVLAI
ATKDVRIFKLVPLRKESTSTGPTKFEVQIVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPLTGSSGQPTVMRTVVGSSAQASQNALNGISAGRYFF
PPLDPPRAATGHGHLLPPPSLIEHCDVEHNQPQQQSVSCRLSSRSLVSLSESDGQ
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgtttgttgcacgcagcattgcagcagatcataaagatctgattcatgatgtgtcgtat
gattttcatggtcggagaatggcgacttgttccagtgaccaaagtgtcaaagtgtgggac
aagagtgagaacggagaatggcactgtactgccagctggaagacgcatagtggatccgtg
tggagagtgacctgggctcatccagaatttggacaagttcttgcttcatgctcctttgac
aggacagcggctgtctgggaggagatagtaggagagtcaaatgacaaacagagaggacag
agccattggataaaaagaaccacacttgtggacagtagaacatcagtgaccgatgtgaaa
tttgctcctaaacacatgggcctaatgctgaccacgtgttcagcggacggagttgtgagg
atctatgaggctccagacgtcatgaacctgagtcagtggtccctgcagcatgaaatctct
tgcaaactcagctgcagctgcatttcttggaacccgtccagctcccgcgcccacccacca
atgtttgcagtggggagtgacgacggcaacgtgacgtatggtggcaaagtccagatctat
gagtacaatgaaaacacaagaaaatatgccaaagctgagactctggcgaccatcacagat
gcagttcatgacactgcatttgctccaaacctgggacgatctttccatgtcctcgccatt
gcaacaaaagatgtccgaatctttaagcttgtccctttaaggaaggagagcacctcgaca
ggacccaccaagtttgaggtgcagattgtcgcccagtttgataaccacaactcccaagtg
tggcgtgtgagctggaacatcaccagcaccttgctggcctcttctggggatgatggctgc
gtgcgtctatggaaagccaactacatggacaactggaagtgcacaggcatcctgaaggga
gacggcagcccgctaactggttcatctggtcagcccacagtcatgagaactgtggtgggc
tcctctgctcaggcctcccagaatgcactaaatggaatttccgcaggaaggtatttcttt
ccgcctctggatccccccagagctgcaaccgggcatggtcacctgctgcctcccccctca
ctcatagagcactgtgatgttgagcacaatcagcctcagcagcagtccgtatcatgcaga
ctttcctccagatcattggtgtccttgtccgagtctgacgggcagtaa

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