Hippocampus comes (tiger tail seahorse): 109522011
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Entry
109522011 CDS
T04969
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAM188B
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcq04121
]
109522011
Enzymes [BR:
hcq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109522011
Ubiquitin system [BR:
hcq04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
109522011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
DacZ_P
FOP_dimer
PDGF_N
Motif
Other DBs
NCBI-GeneID:
109522011
NCBI-ProteinID:
XP_019735737
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MVICVEEVSASLVREYLSRKGLKRTIACMDEEHPRTQSSINNRSHLRQVLHIEDLYRANK
VQSSPLRTLLEIIVKHRIEGHKDVMMACEGEESDSLQSASIISSVSLSPAGTPSPMNEIN
SEHSTVSFVSGDHIKLRPQDKGASPNARVLLSLDGERFMKHSETGSWLNAPADENGQSKM
ASRHDNNRLTMSESEKKPPVNEVIQRSRPSRIRRGMMAGPIASTLQASTKQRQTQKVVTP
QLLLRKQEEHRKSRDGLSGSSLEQKVFEKCLSDATERVKSLEREGQSRNYRKIVKSKTQP
NVRDLSVLVLDDVDDELPEFSKMSIENTATAASSHTVRPMDQHTASELKSVLLGSSLKCF
TVEWRNQGFTFSETHDLRYGMVQKKGGPCGVLASIQAFVLKKLLFENMDSSNTRLQRLRP
TNATRRKCLVLAVAEVLWRASEEKQATVAINSGRMLFTPSGHYTSEGVLEKISCFTVDSI
EDLQLLLEQNIEQFETGELGCLLLTISAVLSRSIDKLKEDMDVATTALIGAHGYCTQELV
NLLLVGRAVSNAFDGDVELDSGNGNSTLLKGIKAPCNIGLLSLFEHYNIFKVGDYLKNPL
LPIWVVCSESHFSVLFGLQEELLTNQDKGEEFDLYYYDGLANQQEEIRLTVCSVGKSALS
CQDADLIPPLELCIRTRWKDAFVSWNDTEPIL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggtcatttgtgtggaggaggtgtccgcgtccctcgtgcgggaatatctgagcagaaag
ggactcaagaggacgatcgcctgcatggatgaagagcatccacgcactcagtccagcatc
aacaacagatcccatttgagacaagttttgcacattgaggatttgtacagagcaaataag
gttcagagttcacctctgaggactttgctggagatcattgtcaagcatcgcattgaaggt
cacaaagatgtcatgatggcctgtgaaggtgaggaaagtgattccctgcagtcggcttca
attatcagctcagttagtctttctcctgcgggaacgccgtcgccaatgaacgaaattaac
tcagaacacagcacagtgtcctttgtttctggtgaccacatcaaattaaggccacaggac
aagggagcatcccccaatgcaagggtgttattgtcacttgatggagagagattcatgaag
cacagtgaaactgggtcatggttaaatgccccagcagatgaaaacggccagtcgaagatg
gcgtctcggcatgataacaatcgccttacgatgagtgaatctgaaaaaaagcctcccgtc
aatgaagtcattcaaaggagccgacccagtcggattagacgcggtatgatggctggaccg
atagccagcacacttcaggcgtcaaccaaacaaaggcagactcaaaaagtggtcacgcct
caactgctgctcagaaaacaagaggagcacaggaagtctcgggatggactgtcagggagc
agtttagagcaaaaagtctttgaaaaatgcctaagtgatgcgacagaaagagtgaagagc
ttggagagggaaggacaaagcagaaattacagaaaaatagttaagtccaagacgcagcca
aatgtgagagatttgtctgtgttggttttagatgacgttgatgatgagctaccagaattc
tccaaaatgtccatcgaaaacactgcaactgcagcgagcagccacacagtccgcccaatg
gaccagcacaccgcctcggaattgaagtcagttctcctcggctcaagtctcaaatgtttc
accgtcgagtggagaaatcagggtttcaccttctccgaaacgcatgacctgagatatgga
atggtgcagaaaaagggcggtccttgtggggttctggcttccatccaagcttttgtttta
aagaagcttctctttgaaaatatggacagtagtaatacaagacttcagcgtttaaggcca
acaaacgcaaccagaagaaaatgtctggtcctagctgtggcagaagtcctgtggagggcc
agcgaggaaaaacaagctacggtagcaataaactcgggaagaatgcttttcaccccaagt
ggacactacacatctgaaggagtgcttgaaaagataagctgttttacagtggacagtatt
gaagacctgcagttgctactggagcaaaacattgagcagtttgagacaggggagctggga
tgcctactcctgaccatatctgccgtcctgtctcgatctattgataaattgaaagaagat
atggatgtggccaccaccgcactcattggagctcatggctactgcactcaggagcttgtg
aacctgctgcttgtgggacgagcggtttctaacgcctttgacggtgatgtggagctggac
tccggcaacggcaactctacgctgctcaagggaatcaaagctccctgtaatattggcctt
ctgtcactgtttgaacattataacatcttcaaggttggagactatctcaagaaccccctt
cttccaatttgggttgtgtgcagtgaaagccacttcagtgtgctgtttggcctgcaggag
gagctgttaacaaatcaggacaagggtgaagagtttgacctgtactattatgacggcttg
gccaatcagcaggaagagatccgtctcactgtctgttctgtcggcaaatcagctttgagt
tgtcaagacgccgatctaattcctcctctggagctctgcattcgaacaaggtggaaggat
gcatttgtgagttggaacgacacagagcctattctctga
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