Hippocampus comes (tiger tail seahorse): 109522067
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Entry
109522067 CDS
T04969
Name
(RefSeq) fibronectin-like
KO
K05717
fibronectin 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04510
Focal adhesion
hcq04512
ECM-receptor interaction
hcq04518
Integrin signaling
hcq04810
Regulation of actin cytoskeleton
hcq04820
Cytoskeleton in muscle cells
hcq05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109522067
04518 Integrin signaling
109522067
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109522067
09142 Cell motility
04820 Cytoskeleton in muscle cells
109522067
04810 Regulation of actin cytoskeleton
109522067
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109522067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109522067
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcq04147
]
109522067
00536 Glycosaminoglycan binding proteins [BR:
hcq00536
]
109522067
04990 Domain-containing proteins not elsewhere classified [BR:
hcq04990
]
109522067
Membrane trafficking [BR:
hcq04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
109522067
Exosome [BR:
hcq04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
109522067
Glycosaminoglycan binding proteins [BR:
hcq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109522067
Domain-containing proteins not elsewhere classified [BR:
hcq04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
109522067
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Fn3_PBP1
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
fn2
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
NDNF
FN3_Tor_3rd
Ig_ENGASE1_C
Motif
Other DBs
NCBI-GeneID:
109522067
NCBI-ProteinID:
XP_019735890
LinkDB
All DBs
Position
Unknown
AA seq
2505 aa
AA seq
DB search
MCGRSIAARVLVALCIGTAVHCMPKGNHKRRRQAHQHHVPSVSQDGCIENGHFYSINDQW
ERQYLGSTLVCTCNGVAGIKCISKPEAEERCYDKINQQYYTVGETYERPKDGMIWDCTCI
GSGRGKISCTIANRCHEDGASYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCKPVAERC
YDNAAGTSYVVGETWEKPYQGWMVVDCTCMGEGSGRITCTSRNRCNDQDTLSSYRIGDTW
TKTDARGNLLQCLCTGNGRGEWKCERHASLHTTGLGTGSRVITNIQPAVYQPAPMPELPQ
EGPCRTDSGLSYFVGQRWLRSQGTKQMMCTCLGNGVSCEQWDGPAPVYGGNSGGQPCVFP
FVYKGKTYHACTSDGRADGQLWCSISSDFETDQKYSFCTEKNVIVATRGGNSNGALCQFP
YLYNGRNYTDCTADGRRDGMKWCGTTTDYDGEQRFGFCPMAAHEEVCTTSEGVMYRVGDQ
WDKRHDVLGHMMRCTCVGNGRGEWSCVAYSQLKDQCIVDTLTYEVNQTFTKQHEEGYMMN
CTCFGQGRGRWKCDAIDQCQEPETRAFYQIGESWDKVIHGIMYKCYCYGNSIGELSCEPQ
QSYPGGQRPVQVIITESGNQPNSHPIQWNAPPSAHIAQYILKWRVKNSNSAWREVMIPGH
LNSYTISGLKPGITYEGQLISVLRFGRQEITRFDFTTHYGSLATSQGETTQPPPVVDTSE
SVTEITSSSFVISWVSASDTVSGFRVEYELNEQGQSAGEPVVLDLPRTATSVNINELLPG
RKYTVNVYEVTDAGEDNLILSTSQTTAPDAPAEHEVEDIGETSIVISWDKPLAPITGYRV
VYTPSIEGESTELTLPDTATSVTLSDLRPGKLYNISIYAVEDSLESEPIFVQVNTAGDPL
PEEVASPTDLQFYEVSDKKIVLTWSGPASDVSGYRVTVVPMDESGSPQREMTLPVSQNSY
MEVTHLQPGTLYRFNVYTIHNGEESIPLIGEHTTKPDAPTDIHFANVTEDSAVILWFAPR
AKISGYRLFLNVEGSNPKQLRLPARLTQYTLLNLKPDTVYTATLHSEQDNTLSEGERAVF
TTNPPMGNAPHFSTDVTDTSIIISWTPVPRVSYKLTVRPSQGGEAPRDVTSDSGSIYVSG
LTPGVEYTYSVQPVINGKEQGSPITRRVITPLPPPTELHLDSNSGTGDITVQWNGASTPD
ITGYRVTCAPTNGQQGNSVEEFVQAGENSCTLENLSPGVEYNISVFTVKDGMESVPISTT
ITPEVPQLTDLSFDDVSDTTISLRWSPLNTTAITGYRITVMAAGESVPIFQDTVMPTTGH
YTVYGLEPGIDYDISVITVTENGESEPTTVTQQTSVPAPTDLGFGQVGPDLMEVTWVSPR
VPNRADINNFLIRYHPIDNDEELTETSVEGTMNNVVLRNLLPNTEYLVSVVCVYEQRESS
PLVGTHKTTLDSPVALRFSEIFTTSFTIHWLAPQSKITGYRIRYQMTSGGRTKDERLPPS
RNHFTLTGLAPDTDYLVNVYAVSGTQESLPLSGHQKTLSDAPTDLEVLDSTPTSITIRWD
SPPVTVRYYRITHGETGGHSNPKEFTVPGSQSTTTISNLQPGTDYTITVYAVTGRGDSPA
SSTPIYVTHRTGVDSPSDMKVMDVNDNSVTVRWSPAQGPIKGYRVTGVPRNGQGSSFTEV
VAPDQTEMTFSGLMPTVEYTFSVYALGQDGESSPLVVNALTNVDRPKDLTFSDIDSTSLR
INWDSPDGIVTAYRVLYSSSEEGERELRPSPRGDAESAIIYGLQPGTEYTVKVIALHDDT
ASTALVGTQATGLSPPTNLQFSQVGPTSFTMHWAVPGQENRITGQTGLTGYRVVVNPKNK
SGPTKEMNLAPDTTKAHVTGLMVATTYDVHVYALKNSLTSRPIQGEVTTLENISPPRRVR
ITDVNDSTITLTWRSKTDAISGFLVEATPTTSTTFTPIQRTIGGDSRSYTITGLEPGTTY
KINIYTLKGNGRSAPLTLTASTAKPVVNPPTNIQFTSLNPSSISFSWERSRSPGVSGYFV
TYEQPGGLPQEVIPRPHSSQTYAIINGLKPGTEYVIKIVALQNTLRSIPLVGKARTQPAL
SHSILVPELPQLPVSHRPTTDILDVPEPFNDKIFDSNHVHLAGTSGQNRPGQQGQHIYTE
YQNLGPNNGLYGPRGGPKEGQRPILREPLVYIPVAGPDGNRVPLVKVSETPLPGLGFGFP
DNETELPQEAQTVTTISWQPIPHTSEYEVSCNPITHMEERGFQMRLPGTSNSATLIGLTS
GASYNVVVEAMRGGAKEKVLEEVVTVGNAVPGDIPISTHRDVCYDTFTHTYHEVGSEWER
MSETGFKLWCRCLGLGSGHFRCDSSKWCHDSGNNYRIGEKWDRHAENGHMMSCTCLGNGK
GEFKCEPHDSTCYDDGKMYRVGNQWQKEYLGAICTCTCYGGQQGWRCENCRRPGGQTHVD
ADLLQPVHSDVFDRYRENAQRKLNIHCPIECLSPELLADAQSPSK
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggaagaagcatagccgccagggtgctggttgctctgtgcatcgggaccgcagtg
cactgcatgcccaaggggaaccacaagagacgaagacaggcacaccagcatcacgtcccc
tcggtgtcccaggatggctgcatagagaacggtcatttctacagcattaacgaccagtgg
gagcggcaatacttgggcagcactctggtgtgcacttgcaacggagtcgccgggattaag
tgtataagcaagcctgaagctgaagaaagatgctatgataagatcaaccagcaatactac
actgtgggagaaacgtatgagagacccaaggatggcatgatttgggattgtacttgtatc
ggatctggcagggggaaaatcagctgcaccattgccaatcgctgtcatgaggacggagcc
tcgtataagatcggagacacctggaggagacctcacgagacaggaggctacatgctggaa
tgcgtctgtctgggtaacggcaaaggagaatggacctgcaagcctgtcgctgagcgttgc
tatgacaacgctgcggggacatcctatgttgtcggggaaacgtgggagaagccctaccag
ggatggatggttgtggactgcacctgtatgggagaaggaagtggccgcataacatgcacg
tccagaaatcgttgtaatgaccaggacactttgagctcctaccgtattggcgacacgtgg
actaagacggacgccagaggtaacctgctccagtgtctgtgcaccgggaacggtcgaggg
gagtggaagtgtgagagacatgcctcacttcacacgactggcctgggcaccggctctcgc
gtgatcactaatattcagcctgccgtttaccaacctgcccccatgcctgagcttccgcaa
gaaggaccctgtcgcaccgactctggactgtcctattttgttggccagcgctggcttagg
agtcaaggaaccaaacagatgatgtgtacctgtttgggcaatggcgtcagctgtgagcag
tgggatggcccggctccagtgtatgggggcaactcgggaggtcagccttgtgtattcccc
tttgtctacaagggcaagacttaccacgcttgcacctccgacggacgtgctgatggacag
ttgtggtgttccatctcgtctgactttgagacggaccaaaagtattctttctgtacagaa
aagaatgtaatcgtggcaacgaggggcggcaattcaaacggcgctctgtgccaattcccc
tacttgtacaacggccggaattacaccgactgcactgccgacggacgccgagatggcatg
aagtggtgcggcactacaacagactatgacggggaacagcgctttggattctgccccatg
gctgcccatgaagaagtgtgcacaaccagcgaaggggtcatgtaccgcgtgggggaccag
tgggacaaacgccacgacgttttgggtcacatgatgcgctgtacttgtgtgggcaatggc
cgaggggaatggagctgtgtcgcctactcccaacttaaagaccagtgtattgtggatact
ctgacctatgaggtgaaccagaccttcaccaagcagcatgaagaaggctatatgatgaac
tgcacctgttttggacaggggcgtggccgctggaagtgcgatgctattgaccagtgccag
gagccagagacaagagccttctaccagattggcgagtcttgggacaaagtcatccatgga
atcatgtacaagtgctattgctatggtaacagcatcggagagctcagctgcgaaccccag
cagtcctatcctggcggtcagcgtcctgtccaggtgatcataacggaatctggcaaccaa
cccaactcccaccccattcaatggaacgccccaccctctgctcacatcgcccaatacatt
ctcaaatggagagtgaaaaacagcaatagtgcatggagggaggtgatgatccccggtcat
ctgaactcctacaccatttccggattgaaaccgggcatcacatacgaaggtcagctgatc
agcgtgttgcggtttggacggcaggagatcacgcgctttgacttcaccacacattatgga
tcattggctacatcacaaggcgagaccacacaacccccacctgtggtggacacctccgag
tcggtgacggaaatcacctccagtagcttcgtcatctcttgggtctctgcctccgacacg
gtctctggttttagagtagagtatgaactcaacgagcagggacagagcgctggggagcca
gtggttctggaccttccccgtacagctacatcggtgaacattaatgagctgctaccaggg
aggaagtacacagtcaacgtctacgaagtgactgatgctggagaggacaacctcattctt
tccacttcgcaaaccaccgctcctgatgcccccgctgaacatgaagtggaggatattgga
gaaacctcgattgtgattagttgggataaaccactggctcccatcaccggctatcgagtc
gtctacacgccatccatagaaggcgaaagcaccgagctgaccctccctgatacagcaacc
tccgtgacgctgagtgacctacggccagggaaattgtacaatattagcatctacgcagtg
gaggacagcttggagagcgagcccatttttgtccaggtcaacactgctggggatccactg
ccagaggaagtcgcctccccaacagacctgcagttttacgaggtatcagataagaaaata
gttctgacctggtcagggccagccagcgacgtttcaggttaccgggtcaccgtggtccca
atggacgagtctggctctcctcagagagagatgactctaccggtcagccaaaactcttac
atggaagtgacccacctccagcccggaacgctgtaccgcttcaatgtgtacacgattcac
aatggagaggagagcatcccgctgattggggagcacaccacaaagccagatgctccaaca
gatatccatttcgccaacgtgaccgaggacagcgctgtgattctgtggttcgctccacga
gccaaaattagcggctaccgtctcttcctcaacgtcgagggctccaacccgaagcagcta
cgcctgccggcccggctcacccagtacaccctcctcaacctgaaaccagatacagtctac
actgctacgctgcactcggagcaagacaacacgctgagtgaaggagagagagccgtcttt
accactaacccaccgatgggtaacgctccccacttcagcaccgacgttactgacacctct
attataatctcttggactcctgtgccacgcgtcagctacaagttgacagtgcgccccagt
cagggcggagaagcccccagagacgtgacctcagattcggggagcatttacgtatccggt
ctgactcccggagtggaatacacctacagcgtgcaaccggtgattaacggcaaagaacaa
ggaagccccatcacgcgccgtgtcatcacacctctgccgcctcccactgagctgcacctg
gactcgaactcaggcaccggagatattacagttcagtggaatggagcaagtacaccagac
atcactggctatcgagtgacatgcgctcccaccaatgggcagcaaggcaacagcgtggag
gaatttgtgcaggctggcgagaactcctgcacccttgagaacctcagtccaggagtggag
tacaacatcagcgtttttaccgtgaaggatggcatggaaagtgttccgatatcaacaacc
atcactcccgaggtcccacagttaacggacctcagcttcgacgacgttagcgacaccacg
atcagtcttcgctggtctccactcaacaccacagccatcactggttacagaatcacggtg
atggcggcgggcgagagcgtgcccatcttccaagatacggttatgcccacgaccggacat
tatacggtttacggcttggaacccggtatcgactatgacattagcgtgattaccgtgacg
gagaacggagagagcgaacccacgacggtcacgcaacagacttctgtgccggctcccact
gatctgggctttggtcaggtaggaccggaccttatggaggtcacatgggtctcaccgcgc
gtccccaacagggcagacatcaacaacttcctcattaggtaccatcccattgacaacgat
gaggagctgacagaaaccagtgtcgagggcacaatgaacaatgttgtgttgaggaatttg
ctgccaaacacagagtatctggtgagcgtggtgtgtgtttacgagcagagagagagctcg
cctctcgtcggtacccacaaaaccactctggattctccggttgctctgcgcttctctgag
atcttcaccacctccttcaccattcactggcttgccccgcagagcaaaatcacgggctac
cgcattcgttaccagatgaccagcggtggaagaaccaaggacgagaggctacctccttct
agaaaccacttcaccctgacaggactggctcccgataccgattacctggttaacgtttac
gctgtcagcgggacacaggagagcctgccgcttagtggccatcagaagaccctttccgat
gctcctacagacctggaagttctcgactccactcccaccagcatcaccatccgatgggat
tcccctcccgtcaccgtgcgctactacaggatcactcatggcgaaacagggggccacagt
aatccgaaggagttcaccgttccgggctctcagtccacgacgacaatctccaacctgcag
cctggtaccgactacacgatcaccgtctatgcggtcactggccgaggagacagccctgca
tccagcactcccatctacgtcacacacaggacaggagtcgactccccttctgacatgaag
gtgatggacgttaacgacaacagcgtcaccgtgaggtggagccccgctcagggcccgatc
aagggctacagggtgaccggagtccccagaaacggacagggctcatctttcacggaagtc
gtggctccggaccaaacagagatgactttctcgggcctgatgccaacagtggagtacact
tttagtgtttatgctctaggacaagatggagagagttctccgctcgtggtgaatgctctc
acaaatgtagaccgtcccaaggacctgaccttctcggacatcgactccacttctttacgg
attaactgggacagtcccgatggaattgttacggcttaccgggtcttgtattccagttct
gaggagggtgaaagagagctgcgcccttcccctagaggagatgccgagtccgccatcatc
tatggcctgcaacccggcactgaatacaccgtgaaggtcatcgccctgcatgacgacaca
gccagcacagcattggttggaacgcaagctacagggctctcgccccccaccaacctccag
ttctcccaggttggccccacttccttcaccatgcactgggccgtgccgggtcaagaaaac
agaataacgggccagacgggcctcacgggctaccgtgttgttgtgaaccctaaaaacaag
agcggacccaccaaggagatgaatctggccccggacacgacaaaggcccacgtcactgga
ctcatggttgcaacgacttatgacgttcatgtgtacgccttgaaaaactccctgaccagt
aggcctatccaaggagaggttaccacactggagaatatcagcccccctcgtcgcgtgcgc
atcaccgacgtcaacgactccaccattacgctgacctggcgctccaagacggatgccatc
tcgggcttcctggttgaggccactcccactacctctaccaccttcacgccaattcagagg
accatcggcggcgactcgcgctcgtataccatcacaggtctggagcctggtaccacttat
aagattaacatctatacgctgaaaggaaatggccgcagtgcacctcttacactcaccgcg
tccacagccaaaccggtggtcaaccctcccaccaatatccagttcacttcgctgaacccc
agcagcatttccttctcatgggagcgatcccgcagcccgggcgttagcggctattttgta
acctatgagcagcccggtggtttgcctcaagaagtcatccccaggcctcactccagccag
acctacgccatcatcaacggtctgaaaccgggaacggaatacgtcattaagattgtcgcc
ctgcaaaatactttgagaagcatccctctcgtgggcaaagccagaacccagccagctctg
agtcattctatcctggtccccgagctgcctcagcttcctgtttctcaccgacccaccaca
gacatattggacgtcccagagcccttcaatgacaagatctttgactccaaccatgtccac
ttggccggcacaagtgggcagaaccgaccaggacagcagggtcagcacatctacacagag
tatcagaacctcggtcccaacaatggactttacggcccccgaggtggacccaaagaaggc
caaagaccaattctcagagaacctctcgtctacattcccgtggcaggccctgatggaaac
agagtgcccttggttaaggtgagcgaaacacctctgccgggccttgggtttggtttcccc
gacaatgagactgaattgccccaagaagcgcagaccgtcacgaccatctcttggcagccc
atcccgcacacctcagagtatgaggtgtcgtgtaatccaattacacacatggaggaaaga
ggctttcagatgcgtcttcctggcacctcgaacagtgccactctgattgggctgacatct
ggagcctcctataatgtggttgtggaagccatgaggggcggggctaaagagaaggttctg
gaggaagttgtcaccgtaggcaatgcagttccaggtgacatccccatttccacccaccgc
gacgtgtgctacgacaccttcacgcacacataccacgaggtgggctcggaatgggagcgc
atgtccgagacgggcttcaagctgtggtgccgctgtctgggtctgggcagcggccatttt
aggtgtgattcatccaagtggtgccacgacagtggcaacaattaccgcatcggcgagaaa
tgggatcgccacgccgagaacggtcacatgatgagctgcacctgcctgggcaacggcaaa
ggagaatttaaatgcgaaccccatgattccacatgttacgatgacggcaaaatgtaccgc
gttggaaaccagtggcagaaagaatacttgggagccatttgcacctgcacctgctacggc
ggtcaacaggggtggcgttgcgaaaactgcaggaggccaggggggcagacccacgtggat
gctgacctgcttcagcctgtccactccgatgtcttcgatcgctacagagaaaacgctcaa
cgcaaactgaacatccactgtccaattgaatgcttgagtcccgaactgctcgcagatgct
caaagcccctcaaagtag
DBGET
integrated database retrieval system