Hippocampus comes (tiger tail seahorse): 109522492
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Entry
109522492 CDS
T04969
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcq03041
]
109522492
Spliceosome [BR:
hcq03041
]
Common components
Common spliceosomal components
General mRNP proteins
109522492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
109522492
NCBI-ProteinID:
XP_019736669
UniProt:
A0A3Q2Z0L1
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MADDLDIEAMLEAPYRKDDKTASPNGGDEQAKSRKKRSRSRDRKRSKSRERKRSRERKRS
REKRRSRSRERRRSRERGGRYRDYHKARKRSRSRSPIRREKSPIRREKSPIRREKSPNKP
LVDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIE
FVEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAANNLQKGSSGPMRLYIGSL
HFNITEEMLRGIFEPFGRIEGIQLMMDSETGRSKGYGFITFADAECAKKALEQLNGFELA
GRPMKVGHVTERSDGSAAASLLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQ
ALQMSGAIAIGAMAAVSAAMNPSMNLNMNPPALNLPSQPLATHCFQLSNMFNPSSEDHPG
WEMDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYVKCPSIPAAMAAVSALHGRYFAGKMI
KAAYVPLPAYHNLFPDAATATQLVVPPPRR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacctggacattgaggcgatgctggaggctccttaccggaaggacgacaag
acggccagccccaatggcggggacgaacaggccaagagcaggaagaagcgcagccgtagt
cgcgacaggaagcgcagcaaaagtcgagagaggaagaggagtcgcgaacgcaagcgcagc
cgggagaagcggcgcagtcgcagccgagagcgccgacgcagtcgtgagaggggcgggcgc
tacagagactaccacaaggcgcggaagcgatcaaggagcaggagtcccataaggagggag
aaaagtccaatcagaagagagaagagtcccatcaggagggagaaaagtcccaacaagcct
ctggtggacaacttgactccagaggagcgagatgctaggaccgtcttctgcatgcagctt
gctgcccgtattcgacctcgagaccttgaggacttcttctctgctgtgggcaaggttcga
gatgtgaggatgatctcagacaggaactcgcgtcggtcaaagggcatcgcttacatcgag
tttgtggaggccagctctgttcctctcgctatcgggctgacagggcagaggctgctggga
gttcccatcattgtgcaggcctcgcaggctgagaagaaccgagcagccgccgctgcggcc
gccgccaacaaccttcagaaaggctcatcaggacccatgaggctctacatcggctcgctg
cacttcaacatcacagaggagatgctgagaggaatctttgagccctttggaaggatcgaa
ggcatccagcttatgatggacagcgagacgggtcgctccaaaggatatggctttattaca
tttgcagacgcagagtgcgccaagaaagctctggagcagctcaatggttttgagctggca
ggccggcccatgaaggtgggccatgtgactgagcggagcgacgggtccgcagccgcctct
ctgctggacagcgacgagctggagcgcaccggcatcgacctgggcaccaccgggcggctg
caactcatggctcggcttgccgaaggtactggcctgcagatccctcccgctgcccagcaa
gcactgcagatgagtggcgccatcgccatcggtgccatggctgccgtctcagctgccatg
aatccatccatgaacctcaacatgaaccccccggcactcaaccttccctctcagcctttg
gccacgcactgcttccagctctccaatatgttcaaccccagcagtgaggatcatcctggc
tgggagatggatatccagcacgatgtcattgaggagtgcaacaaacatggcggcgtcgtt
cacatctatgtggacaagaactcaacggagggcaacgtgtatgtcaagtgtccgtccatc
cctgctgccatggcggctgtcagcgctcttcacggacgatactttgcgggcaagatgata
aaggcggcatacgtgccacttcccgcctaccacaacctgttcccggacgccgccactgcc
acgcagctggtggtcccgcctccgcgccgatga
DBGET
integrated database retrieval system
