Hippocampus comes (tiger tail seahorse): 109522528
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Entry
109522528 CDS
T04969
Name
(RefSeq) dynein intermediate chain 1, axonemal-like
KO
K10409
dynein axonemal intermediate chain 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109522528
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcq03037
]
109522528
04812 Cytoskeleton proteins [BR:
hcq04812
]
109522528
Cilium and associated proteins [BR:
hcq03037
]
Motile cilia and associated proteins
Dynein arm
109522528
Cytoskeleton proteins [BR:
hcq04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
109522528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_HPS5
EIF3I
WDR55
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
109522528
NCBI-ProteinID:
XP_019736737
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MPTNNAAAPGKKKVPAAKSQKASNKKKDEEDDFGDYGWEERTHGKLTKPADQLDLTEAEL
KEEVTRILTAENPHAPQNIVRYSFKEGAFKLTSVVDQLAVHFVLDGCLIHQDSDEARRLA
ASGDLPEETTTVDTGAEPDEGKTEILDASGDGGEDEDAGEDDRPDSVASKTNEQEPKCTN
QFNFIERASQTLNNALRDRSCQTVPPPRCNYSATATQWEIYDAYTEELQKQEMKKDKQRA
FQIKKDGDQNKKKILNETPNDDITPMAMPVTLLERMVNQNTCNDIAQDFKYFEDAADEYR
EQEGTLLPLWKFQYDKAKWMCVTALCWNEKYPDLFGVALGSYDFSKQGRGMLLFYTLKNS
TFPEYIFPTGSGALSLDIHKRNSYLVAAGFYDGCVCVYNLKKKGPEPEYKSNAKTGKHTD
PVWQVRWQNDDMDNKHNFYSVSSDGRVVSWTLIKNELVFSDTIRLTVADPDGIQERSTVG
GTCFDFHKQTDSLFVVGTEEGKIHKCSKNYSSQFLETYAAHNMAVDAVKWNPYHPKVFIS
CSSDWTIKIWDHTVNTPMFTFELNAPVADVAWAPHSSTSFAAVTTEGLVHVFDLSINKYQ
AICQQPVVAKNKTKLTHIEFNPVHPIIIVGDDRGSVISLKLSPNLRKKPKGKKGQELPEG
PEVETAKMEKLLNLLRDSEQSSVK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccaataatgctgcagcacctgggaaaaagaaggtgcctgctgcaaagtcacaa
aaagcaagcaacaagaaaaaggatgaggaagatgactttggtgattatggctgggaagaa
aggactcatggcaaacttacgaaacctgctgatcaactggatctcactgaagctgagctg
aaggaggaagtcacaaggattctgacagccgaaaatccacacgcgccgcaaaatatcgtc
cgatacagcttcaaggaaggtgctttcaagctgaccagtgttgttgatcagctggctgtc
cactttgtcctggatggttgtctcattcatcaggactctgatgaggctcgcaggctggca
gccagtggagaccttcctgaagagacaacaacggttgatactggagccgagcctgatgag
ggaaaaacagaaatactggatgcgtctggagatggaggtgaggatgaggatgctggggaa
gatgacaggccagatagcgttgcctccaaaacaaatgagcaggagccaaaatgtacaaac
cagttcaatttcattgaaagagcttcgcaaacactcaataatgcactgcgggatagaagc
tgccagacggtaccgcctccacgctgcaactattcggccaccgctactcagtgggagata
tatgacgcgtacacggaggagctgcagaaacaagaaatgaaaaaagacaagcagagagcc
ttccaaataaagaaagatggcgaccagaacaaaaagaagatattgaatgaaacgccgaat
gatgacatcacaccaatggccatgccagtcacactgttggaacgaatggtcaatcagaat
acatgcaatgacatagcacaagatttcaaatactttgaggatgcggcggatgaatatagg
gagcaagagggcactcttcttcccttgtggaagttccaatatgacaaagccaaatggatg
tgtgtcacggcactctgctggaatgagaaatatcccgatctttttggcgtggccttggga
tcttatgacttcagcaaacagggccgcgggatgctcctcttctacaccttgaagaactcc
accttccccgagtacatcttcccaacgggttctggcgccctgagcctcgacattcataag
cgaaattcctatctggtggccgccggtttctatgatggctgcgtttgtgtgtacaacttg
aagaagaagggaccggaacctgaatacaagagcaatgcgaaaactggcaagcacactgac
cctgtctggcaggtgcgatggcagaatgacgacatggacaacaagcataatttctattct
gtgtcctctgatggccgtgttgtgtcttggacactcattaagaatgagctggtcttctca
gacactatcaggctcacggtggctgatcctgatggtattcaggagcgcagcactgttggc
ggtacatgctttgacttccacaaacagaccgactctctttttgtcgttggcactgaggag
ggtaaaatacataagtgctccaagaattactccagccagttcctagagacttacgctgcc
cacaacatggcagtggatgccgtgaagtggaatccttaccacccaaaggttttcatctct
tgcagctcagactggaccatcaagatctgggaccatactgtcaacactcccatgttcaca
tttgagctcaacgctccagttgctgatgtggcctgggcaccacactcctccactagcttt
gctgctgtcaccacagaaggattggtccacgtttttgacctgagcatcaacaagtatcag
gctatctgccagcagccggtggtggcaaaaaataagaccaaactgactcacattgaattt
aatcctgtccatcccatcatcatcgtgggagacgacagaggctctgtcatcagcctgaaa
ctgtccccgaacctccgcaagaaaccaaagggcaagaaaggtcaagagctgcccgaaggt
cccgaagtggaaacggccaagatggagaagcttctcaacttactgagggactcggagcaa
agcagtgtcaagtga
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