Hippocampus comes (tiger tail seahorse): 109522632
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Entry
109522632 CDS
T04969
Symbol
tsen2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcq03016
]
109522632 (tsen2)
Enzymes [BR:
hcq01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
109522632 (tsen2)
Transfer RNA biogenesis [BR:
hcq03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
109522632 (tsen2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
109522632
NCBI-ProteinID:
XP_019736924
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MQADFRPPRRRCRVDEEYVAPLPVSRSSPERRRAIRSTTSCFRADLINRHVLVTEPKHIS
DIYNQGYFGKGILSRARPERGISDQWKQYEGFLVPVITQARYEELLGWAESALLAQGLAQ
VAVNQMLLRLRQPVQVDELRWEVENGDKPQLDAQAHPHANFSPHLESKPSQSLLRELSPG
SSPDLSPDQGSDSGSDSEPDDAPVVPGPGFVLVSFDGDHVATETPQLRRNPLRMTEYLQL
GLEEAFFLVYSLGCLSVHLQQDPLSITELWRQCMALRPDFVSSYAAYHHFRSRGWVPKGG
SGAKYGVDMLLYRKGPPFYHASYSVVVEKVDERFEGSTLRPFSWRSLAALSRITANVSKE
LLLCYVIHPADLSEAELDSPACLSKLKVQDVMVSRWVSSKERAEQEDI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccgactttcggccgccccggcgccgctgccgggtggacgaagagtacgtggca
ccgctccccgtgagccgaagctcgccggagaggcgaagagctataaggtcgacaacgagc
tgcttccgggcggacctcatcaaccgacatgtgctcgtcaccgagcccaagcacatcagc
gacatatacaaccagggatatttcgggaaaggcatcctgtccagagcccgaccagagcgc
ggcatctccgaccaatggaagcaatatgaagggttcctggttcctgtcataacacaggcc
aggtatgaggagctgctcggatgggcggagtcagctctcctggctcaggggttggctcaa
gtggctgtcaatcaaatgctgttacgactccgccagcctgtccaagtggacgagttgagg
tgggaggtggagaacggggacaagccccaactggatgctcaagcgcacccacacgcaaac
ttcagtcctcacctcgaatccaaaccgagtcagagcctgcttcgtgagctgagtcctggc
tcgagcccagacctcagtcctgaccaaggatctgactctggatctgactctgagccggat
gatgctcctgtagttccaggtcctggttttgtccttgtgagctttgacggtgaccatgtt
gccacagagacgccgcagctcagacggaatcctttacgaatgacggaatacctgcaactc
ggcctggaggaggccttcttcctggtatacagcctgggctgcctgtctgtccacctgcag
caggaccccctgtcgatcacggagctgtggagacagtgtatggcgctgcgccctgacttt
gtcagctcctatgcggcctaccatcactttcgcagcagggggtgggtccccaaaggagga
agcggcgccaagtatggcgtggacatgctgttgtacaggaaaggtcctcccttctaccat
gccagttattcagtggtagtggaaaaagtggatgagcgttttgagggttccacgctgcgc
ccgttttcctggcgttctctggcagctttgagcagaatcactgcgaatgtctcgaaggag
ctcctcctgtgttacgtcatccatccagccgacctgtcagaagctgagctggactcgcct
gcttgtctgagcaagctgaaagttcaggacgtcatggtcagcaggtgggtttcctccaaa
gagcgcgctgagcaagaagacatctga
DBGET
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