KEGG   Hippocampus comes (tiger tail seahorse): 109522796
Entry
109522796         CDS       T04969                                 
Symbol
itga10
Name
(RefSeq) integrin alpha-10 isoform X1
  KO
K06586  integrin alpha 10
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq04510  Focal adhesion
hcq04512  ECM-receptor interaction
hcq04810  Regulation of actin cytoskeleton
hcq04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109522796 (itga10)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109522796 (itga10)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109522796 (itga10)
   04810 Regulation of actin cytoskeleton
    109522796 (itga10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hcq04515]
    109522796 (itga10)
Cell adhesion molecules [BR:hcq04515]
 Integrins
  Integrin alpha subunits
   109522796 (itga10)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 VWA_2 FG-GAP_3 FG-GAP_2 vWA_SIBA-E ITGAX-like_Ig_3 EIF3I
Other DBs
NCBI-GeneID: 109522796
NCBI-ProteinID: XP_019737160
LinkDB
Position
Unknown
AA seq 1198 aa
MELRTCLLRIFLLKGLCQCFNIDVTHPRIFSGPDDALFGFSVLQHESEGEKSMLVGAPWD
GRHNNRKGDVYKCGMGEGSHSNCSKLNLGEAAFHNISKNLKNSHLGMTLTPDSPDGLLAC
APLWSQECGTSMFSTGICASVNDDLQPREIIAPTAQRCTTYMDIVIVLDGSNSIYPWFEV
QSFLSNILSKFHISPDQMQVGILQYGEVAVHEWSLKEYQTTQEVVEAAKNISRQEGRETR
TAYAINMACTEAFSAERGAREGATKVMIVVTDGESHDGEELPDALLECETRNITRYAIAV
LGHYHRRQQDPDTFINEIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFSLEGTLGNQ
SSFHMEMSQIGFSTHLLDDRILFGMVGAYDWDGGVLKEGASGRIVPAREAFESEFPLELK
NHAAYLGYTVSSVLVGDWRRLYVAGAPRFKHKGKVILFELSDDGDVNIVQALNGEQIGSY
YGSELCGMDVDQDGITDVLLVAAPMYLGSGNKEAGRVYIYTLSGEEAFVSNGTLKSDEKS
QDARFGYAMAVAPDLNHDGFTDLLVGAPLEDDHRGAVYVYHGQSIYVNHNYKQRIPAMSV
SPSLQYFGRSVSARLDLDGDGLIDLAVGAHGSAVLLRSRSIVQINVSLSFQPHSINVIQK
TCQRGGRESACLDATVCFTAASRSPGPSGNGFDLWVAAMLDDRKLSARALFDDSSHRLTQ
LSLRAHTGQTLCYKLPFHVYDTADYIRPISFSLRFKINNTESGPVLDEGWPTSVKKYIPF
FKDCGEDDVCTTDLVLQAQMDISGTRHKPYVIRSPRRRMSVEVQLENRLENAYNTSLTLH
YSRNLHFSSLSIREDGNFKIECTGLGSNSHSCNVSYPVFRSQSKVPHTGTPASHATFGTR
PLGPRVTRLVSSTRSKVNFMLEFEFSCATLHNRVQMKLNVASDSVERADTLGDNSVQLQS
FVQYEPDLFVSSDSNLNRYEVHPTRTMSEAIGPEFYTHFKLQNLGCYPVSNLELRLLLPS
AAAGDRVFMTVTDISSHNATAVNCSVLSDLAQLKNRQRDVRPLHPEDMMENDVLNCSRSW
CIEVTCQVQQLLKGQAEVIRLSRRVHDDFFRQAKYKSARIVGMYQIAPHETNLISLATGT
VWRETVLEVLKGRAIPISLWILIGSIIGGLLLLALIIFILWKLGFFARKHREDENQDD
NT seq 3597 nt   +upstreamnt  +downstreamnt
atggagctgcgtacatgcctgctgcgcatcttccttctcaaaggtttgtgtcagtgcttc
aacattgacgtgacgcatccgcggatcttcagcggtccggacgacgcccttttcggcttc
tccgtgctgcagcatgaatcggaaggagagaaatcaatgctggtgggcgctccttgggac
gggcggcacaacaacaggaaaggagacgtgtacaaatgtggcatgggagaggggagccac
tccaactgcagcaagttgaatttaggcgaggcggccttccacaacatatcgaaaaacctg
aaaaactctcacctggggatgactctcacgcccgactcgcccgatggactcttggcatgt
gcaccactgtggtctcaggagtgcggcacgtccatgttcagcaccggcatctgcgcctct
gtcaatgacgacctccaaccgagagagattatcgctccgacggcgcagcggtgcacaacg
tacatggacattgtgatcgtgctggacggctccaacagcatctacccctggtttgaggtg
cagagcttcctcagcaacatcctcagcaagttccacataagcccagaccaaatgcaggtg
ggaatcctgcaatacggtgaggtggcagtccacgagtggtcgctgaaagaataccagacc
acacaggaggtggtggaggccgccaagaacatcagtcgccaggaaggacgagagacgcgc
accgcttacgcgatcaacatggcctgcaccgaagccttcagcgccgagcgaggggcgagg
gaaggcgccaccaaggtgatgatcgtggtgacggacggagagtcgcacgacggcgaggag
ctgcccgacgctctgctggagtgcgagaccaggaacatcaccagatacgccatagctgtc
ctgggccactaccaccgaaggcagcaggaccccgacaccttcatcaacgagattaagtac
atcgccagcgacccggatgacaagtacttttttaatgtgacagacgaggcggcgctgaac
gacatcgtggatgctctgggagatcgtatcttctcactcgaaggcacactgggcaaccag
agctccttccacatggagatgtcacagatcggcttctccacacacctgctggatgacagg
attctgttcgggatggtgggcgcttacgactgggacggcggcgtgctgaaggagggcgcc
agcgggagaatcgtgccggccagggaggcctttgagagcgagttccccctggagttgaaa
aatcacgccgcttatctcggctacacggtgtcatccgtgctggtcggagattggaggagg
ctgtatgtggccggcgcgccgcgattcaagcataaaggcaaagtcatcttgttcgagctg
agcgacgacggcgacgtcaacatcgtgcaggccctcaacggagaacagatcggttcttat
tacggcagcgagctgtgcggtatggatgtcgaccaggacgggatcaccgatgttctcctg
gttgcggcgcccatgtacttgggctccgggaacaaagaggctgggagagtctacatctac
acactcagtggggaagaggcgttcgtctccaacggcacgctgaaatcagacgaaaagtcc
caggacgccaggtttggctacgcgatggccgtcgctccggacctcaaccacgacggattc
accgacctgctggtgggcgccccgttggaagatgaccatcgcggggctgtgtacgtgtac
cacggccaaagtatttacgtgaaccataactacaagcagcgtattccggccatgtcggtg
tcgccgtccttgcagtattttggccgcagcgtcagtgccaggttggacttggatggagac
gggctgatcgacttggcggtgggagcccacggcagcgccgtgctgctcagatctcgaagc
atcgtgcagatcaacgtcagtctttccttccagccgcactccatcaacgtcatccaaaag
acgtgccagcgcggcggccgcgaatccgcctgcctggacgccaccgtctgtttcacggcc
gcgtcgcgttcccctgggccgagcggcaacggctttgacctgtgggtcgcggcaatgttg
gatgacaggaaattgtcagcccgggcgctgtttgacgacagctcccacaggctgacccaa
ttgtcgctgcgagctcacacaggacagactctgtgctacaaactgcccttccacgtctat
gacacggccgactatatccgcccgatcagcttctcgctgcgcttcaagatcaacaacacc
gagagcggtcccgtgttggacgagggctggccgacgtcggtcaagaaatatatccctttc
tttaaagactgcggggaggacgacgtgtgcaccaccgatttggtgctacaggcccaaatg
gacatctccggaaccagacataaaccatatgtgatccgcagtcctcgtaggcggatgtca
gtggaagtccaactggagaacagactggaaaacgcctacaacaccagcctgacgctgcac
tattcacgcaacctgcacttctccagcctcagtattcgggaggacggcaacttcaagatc
gagtgtacagggctgggctccaacagccactcatgcaacgtcagctacccggtctttcgc
tcccagtcgaaggtaccccacacgggaacacccgcatcgcacgccacattcggaacacgc
cctctcggtccacgtgtaacgcgtctcgtctcttctacgcgatcaaaggttaacttcatg
ctggagtttgagttcagctgcgccaccttgcacaatcgagtccaaatgaagttgaacgtt
gccagcgacagcgtggagcgagcggacactctcggggacaacagtgtccagctgcagagt
tttgtccagtacgagcccgacctcttcgtcagcagcgactcgaatttaaaccgttatgaa
gtgcatcccacgcggacaatgtcagaagccatcgggccggagttctacacgcactttaag
ctccagaacctgggttgttaccctgtgagtaatctggagttgaggctgcttctgccttcg
gcggctgcgggagaccgagtcttcatgacggtcacggacatctcctcgcacaacgccacg
gccgtcaattgcagcgtcctgagtgatctggcgcagctgaagaaccggcagagggacgtg
cgccccctccaccccgaagatatgatggagaatgatgtcctgaactgcagcaggtcatgg
tgcatcgaggtgacgtgtcaagtccagcagctcctgaaaggacaagctgaagtcattcgc
ctcagccgcagagtccatgacgactttttccgacaggccaaatataagtcggcgaggatc
gtcggcatgtatcagatcgcgcctcacgagaccaacctcatcagcctggccacggggaca
gtttggcgagagactgtgctggaggtgctgaagggacgagccattcccatctcactgtgg
attctcatcgggagcatcattggtggcttgctgctcctggcgctcatcatctttatacta
tggaagctcggcttcttcgcgcggaagcacagagaagatgagaaccaagacgactga

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