Hippocampus comes (tiger tail seahorse): 109522858
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Entry
109522858 CDS
T04969
Symbol
pnn
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03013
Nucleocytoplasmic transport
hcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109522858 (pnn)
03015 mRNA surveillance pathway
109522858 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109522858 (pnn)
03041 Spliceosome [BR:
hcq03041
]
109522858 (pnn)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109522858 (pnn)
Spliceosome [BR:
hcq03041
]
Complex C
Other components
EJC/TREX
109522858 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
109522858
NCBI-ProteinID:
XP_019737248
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MAVAVRSLQDQIEKAKESLKNVDDNIRKLTGRDPNEFRPGQLRRFGGPMAGVAVAAMGGG
GRGRGFNLLRRSLSDIGGGGPPAKQRDIDGALLRLAGDQRARRDVRHDSDAEDDDDVKKP
ALQSSVVATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVCTEKQKRR
SEIEQKLEVQAEVEKKKLESEKRELFEERRAKQTELRLLEQKVELAQLQEEWTNHNNNLV
KFIRTKTRPHIFYRPGKMCSASQKLLDDSTKKLNAVFEERREAFTEHINKMESRPRRQLN
RDQDGSSAATGKDHSAEGKPAGQVDKVTGNKRTARMEEDDDDEEEEEDQEEEEKEKGVDG
EQGEASEVAGKGELEEGGDSREGLNEDEGMEFEEAGNGEKAGEEKEKTQVRGEKEEEARP
GSEEVEVEAGKEQGDSSKTEQDEDSKEGPSDLETEKTEITPPCEPIASQQEATRSAQLGP
PNPTPEEPAASLAEPQMAPTTETVSGAAGQEPAVPSAEIPDSASLNPAEQRQPGDESAVK
PQPDSQAAPSSPSALLKEQKEGARGRKKAKESKKGRSQSRSSSSSSCGSSSSGSSSSSSA
SSHSSSSSSSSTSSSSSRSRSRESGKRSKRPSGRDKKKEERSHRKKGGSSGGAGGKDAKE
GRKRKSNEGRSRSYRSDREQKDRDRKDKRR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgcggagcttacaagaccagattgaaaaagccaaagaaagcttgaaa
aatgttgacgataatattcgtaaattaaccggacgagatcccaatgaattcagaccgggc
cagctgcgccggttcggtgggcccatggcaggcgtggcagttgcagcaatgggaggagga
ggtagaggaagaggatttaacctgctcagacgcagtctctccgacattggcggcggtggc
ccccctgccaagcagagggacatcgacggtgctttgttaaggctggcaggcgaccagagg
gccaggagagatgtgcgtcacgacagcgacgccgaggatgatgacgatgtcaaaaagccg
gcgttgcagtcgtcagttgtagctacctccaaggagagaacacgccgggacctcattcaa
gaccagaccatggatgagaaaggcaaacagaggaatcggcgcatgttcggcctgctcatg
gggactctgcaaaaatttaaacaagagtcgaacgtttgtacagagaagcaaaagcggcgc
tctgagatcgagcagaagcttgaggttcaggctgaggttgagaagaagaagttggagagc
gagaagagggagttgtttgaagagaggagagccaaacagacagagctgagactgctcgaa
cagaaagtggaattggctcagttgcaagaggagtggaccaaccataacaacaatctggtg
aaattcattcgcaccaagaccaggccacacatcttctaccgacctgggaagatgtgctcc
gccagccagaaactcctcgacgactccaccaagaaactaaatgctgtgtttgaagagcgg
cgcgaagcattcacggaacacatcaacaagatggagtcccgaccacggcggcagctaaac
cgcgaccaggacggcagctctgcggcgacagggaaggaccactcggcggagggtaagcca
gcaggtcaggtagacaaggtgacaggtaacaagaggactgcgcgcatggaggaagatgat
gatgatgaggaggaggaggaggatcaggaagaggaggagaaagagaagggggtggatgga
gaacagggggaggctagcgaggtcgcggggaaaggcgagctagaggaagggggggatagc
agggaaggcttaaatgaggacgaggggatggaatttgaggaggcagggaatggggagaag
gcaggcgaggagaaggagaagacgcaggtgcgtggcgaaaaagaggaggaggcgcgtcca
gggtcagaagaggtggaagtggaggcaggcaaagagcagggggacagcagtaagacggag
caggatgaagacagtaaagagggcccctcagaccttgaaactgaaaagactgagatcacc
cctccatgcgagccaatcgcgagccaacaagaggcgactcgcagcgctcagctcggtccc
ccaaaccccaccccagaggaaccagccgcatccttggctgagcctcagatggccccaaca
accgaaacggtctccggcgctgcgggccaggagccggcggttccttccgccgagatcccc
gattccgccagcctgaacccggccgagcaaaggcaacccggagacgagtcggccgtcaaa
cctcagcccgattcgcaggcggccccgagcagcccgagcgcgcttctcaaggaacagaaa
gaaggcgcgagggggaggaagaaggcaaaggagtcaaagaagggccgcagtcaaagtcgc
agctcttcgtcttcctcttgcggctcctcctccagcggaagctcttcgtcttcatccgct
tcaagccactcatcctcctcctcatcctcgtcgacctcctcgtccagcagtcgaagtcgt
agccgggagagcggcaagcgcagcaaaagaccgtcaggcagggacaagaagaaagaggag
aggagtcaccgcaagaaaggagggagtagtggaggcgcaggaggcaaggatgccaaggaa
gggaggaagaggaagagcaatgaagggaggagcaggtcatatcgcagcgatagggagcag
aaagacagagataggaaggacaagagacgctaa
DBGET
integrated database retrieval system
