Hippocampus comes (tiger tail seahorse): 109522901
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Entry
109522901 CDS
T04969
Symbol
hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04137
Mitophagy - animal
hcq04140
Autophagy - animal
hcq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109522901 (hif1a)
04137 Mitophagy - animal
109522901 (hif1a)
04148 Efferocytosis
109522901 (hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109522901 (hif1a)
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109522901 (hif1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
109522901
NCBI-ProteinID:
XP_019737292
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAEQLPLPHSVSSGLDKASVMR
LTISYLRMRKLLGTDEPKPEEESELDTQLNSPYLKALEGFLMVLSEDGDMIYLSENVNKC
LGLAQFDLTGHSVFDFTHPCDQDELREMLVHRTGSKKTKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCCGHMRSHSGLNEQDHKEPPLPYLVLICDPIPHPSNIEVPLDAKTFL
SRHTMDMKFTYCDERITELLGYDPEDLLDRSVYEYYHALDSDHLTKTHHNLFAKGQVSTG
QYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQDEKLILSLEQTEDVKPV
KEEQKDQEKVVVLSCSLEKSPTLLKNKEREEEKAPELDVIKLFTQTLEPKPVTSLYEQLK
EEPEALTLLAPAAGDTIISLDFSCPESDIQLLKDVPLYNDVMLPATSEKLALPLSPLPPS
EPLSVDVTAVNGKSDNYVGPMCKSTTSNSTAEVPPPPDFCLTMDPDISDFKLDLVEKLFA
IDTQPKTPFTMQAMEDLDLEMLAPYIPMDDDFQLRSVSPEQPLSCGLVKSLESSSHATQD
LHNDLGLPFSTPSSDTTSPAPPDPVAVSPSSSSLIKRTPQLDKEVSLRTLAAQNAQRKRK
MDDIREMVGQETLPQEIVKQGKKLKVELGTTQTVLLLPSDLASCLLGSTSEATRSLFNLP
QLTRYDCEVNAPLQGRQYLLQGEELLRALDHVN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggacacgggaattgtacctgaaaagaaaagggtgagctcggagcgaaggaaggagaag
tcaagggatgcggcgcgatgccggcgcgggaaggagtccgaggtgttctacgagctcgct
gagcagctgccattgccgcacagcgtcagctccggcctcgacaaggcctccgtcatgagg
ctcaccatcagctacctgcgcatgagaaaactgctcggcactgatgagccgaagccagag
gaggagagtgagttggatacacagctgaacagtccctacttaaaagctctggagggcttt
ctaatggtgctgtcagaagatggcgacatgatttatctctcggagaatgttaacaagtgc
ctcggcctggcacagtttgacctgaccgggcacagcgtgtttgatttcacacatccctgt
gaccaggacgagttgagggaaatgctggtccacagaacaggctccaaaaagacaaaggaa
ccaaacacagagcgcagcttcttccttcgaatgaagtgcacgctcacgagccggggccgt
actgtcaatgtcaagtctgctacatggaaggtgctccactgctgtggccacatgcgctca
cacagtggcctcaacgagcaggaccacaaggagccaccgcttccctacctggtgctgatc
tgcgatcctattccacacccttccaacatcgaggtccctctggatgccaagacttttctc
agccgccacacaatggatatgaaattcacatattgtgacgagaggatcactgagcttttg
gggtatgatccagaggacctgttggatcgttctgtgtacgagtactatcacgcactggac
tcagaccacctcaccaagactcatcacaacttgtttgcaaagggccaggtcagcacaggc
caataccggatgttggccaagagaggaggttttgtgtgggtggaaacacaagcaactgtc
atctacaataacaagaactcgcagccgcagtgtgtggtctgcgtcaactttgtcctcagt
ggcatccaggacgagaaactgatcttgtccctggagcagacagaagatgtgaagcctgtg
aaggaggagcagaaggatcaagaaaaggttgttgtgctgagctgctcattagagaagtcc
ccaaccctgctgaaaaacaaggaaagagaggaggagaaggctcctgagctggatgtgatc
aagctcttcacacaaacgcttgagccaaagccagtgacaagcctgtacgagcagctgaag
gaagagcccgaggccttgactttgctggccccagcagctggagacaccatcatctccttg
gatttcagctgccctgaatctgacatccagctgttgaaagacgtgcccctctacaatgat
gtgatgcttcctgccaccagtgaaaagctggcactgcctctttctcctctgccgcccagc
gagcccctcagtgtcgatgtcaccgctgtgaacgggaaaagtgacaactatgttgggccc
atgtgcaaatcaacaaccagcaacagtacagcagaggtccctcctcctccggacttttgc
ttgaccatggacccggacatctctgactttaaactagacttggtggagaagctgtttgcc
atcgatacacaacccaaaaccccctttaccatgcaggcaatggaggacttggaccttgag
atgttggctccctacatccccatggatgatgacttccagctgcgtagtgtgagccccgaa
cagccgctatcttgtggacttgtcaaatcgctcgagagctcgtcacacgccactcaggat
ctgcataatgatcttggcctgcccttcagcacgccaagcagtgacaccacgtccccggca
ccgcctgacccagtcgctgtttccccctcttcctccagcctcattaagagaacgccacaa
ttggacaaagaggtgtccctacgcaccctggcagctcaaaatgcacagcgcaaaagaaaa
atggatgacatacgagaaatggtcggccaggaaactttgcctcaggaaatcgtgaagcaa
gggaagaaactgaaggttgagttgggcacaacacaaactgtactcctgctgccttcagat
ttggcaagttgcctgttaggcagcacatcagaggccaccaggtccctcttcaatctgccg
cagctcacccgctacgactgtgaggtcaacgccccgttacagggccgccagtatctgctg
cagggggaggagcttctgcgcgccttggaccacgtcaactaa
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