Hippocampus comes (tiger tail seahorse): 109523009
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Entry
109523009 CDS
T04969
Symbol
deaf1
Name
(RefSeq) deformed epidermal autoregulatory factor 1 homolog isoform X1
KO
K23041
deformed epidermal autoregulatory factor 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109523009 (deaf1)
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109523009 (deaf1)
Transcription factors [BR:
hcq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
109523009 (deaf1)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109523009 (deaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAND
zf-MYND
Motif
Other DBs
NCBI-GeneID:
109523009
NCBI-ProteinID:
XP_019737405
UniProt:
A0A3Q2Z9Y5
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MDEAESATKALGLDEPRRRAGSDTESDAEVSTMAVMAAPENIDMGAEAMPNPDDAESAFA
EVSTVAVEDVQAADDNVFTTPVDAVENLPEHVLSGRSPLELAEGLSGQKTTLIVVHTDTT
VGQQDRLKSASAISTGLATPPTPPAPPQDKEPASKYNWDPSVYNNELPVRCRNSSGVLYK
SRLGSGGKGRCIKHDQRWLTPTEFEALAGRASSKDWKRSIRYGGRPLLCLIQDRILNPHA
ASCTCAACCDDMVLDGDSLEAENITMNGPVRLFVPYKRRRKETETSAVPAKKDVPASKNI
TLSPGTTFTVSPMGQIAPSGTLSFERSPSSDTAAAAAAIISDASAQSEVYADTAVLTALP
ALALCPQAKMAVASPSPSLVGTLEVGPVAGATLAVGPPLLSGGPADAWQGLEEMANTLMS
NAQQLKALIEQAKRDNKGHKECAVSQSFQNQITFQTPPDDTQAKRSTDIAEVILNQMCEN
CGRVALSECTGCRKVNYCSTFCQRKDWRDHQNSCFQSGGGGAAPEDEPMAALGMDKVK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagcggaatcggcgacgaaggcgctcgggttggacgaaccccgcaggcgggcg
ggctcggataccgagtcggacgccgaagtctccacgatggccgtcatggcggcgccggaa
aacatcgacatgggggccgaagcgatgccgaatcccgacgacgccgagtcggctttcgca
gaggtctccacggtggcggtggaagacgttcaggctgcagacgacaacgttttcaccacc
ccggtggatgcggtggaaaaccttccggaacacgtgttgagcggaaggagccccctggag
ctggccgagggtctgagcggccagaagaccaccctcatcgtggtccacaccgacacgaca
gttggacagcaagaccgactcaagtctgcgtccgccatctcgactggcctggcgactcca
cccactccgccggctcctccccaggacaaagagcccgcctccaagtacaactgggacccg
tcggtatacaacaacgagctgccggtgcgatgccgcaacagcagcggcgtcctctacaaa
agccgcctgggctccggcggtaaaggtcgctgcatcaaacacgatcagcggtggttgaca
cccaccgagtttgaggctctggcgggtcgcgccagcagcaaagactggaagaggagcatc
cgctacggagggaggcctctgctctgcctcatacaggaccgcatcctcaaccctcacgcc
gcctcgtgtacgtgcgcggcctgctgtgacgacatggtcctggatggagactccttggaa
gccgagaacatcacaatgaacggcccagtgcggctcttcgtcccgtacaagcgaaggcgg
aaggagacggaaacgtcggctgttcccgccaaaaaggacgtccctgccagcaaaaatatc
acgctgagcccagggaccacattcacggtgtcaccgatgggtcagatcgccccgtcgggg
acgttgtctttcgagcgctcgcccagcagcgacacggccgccgccgccgccgccattatc
tcggacgcctcggcgcagagcgaagtctacgcggacacggcagtgttgacggccttaccg
gcgttggcgctgtgcccccaagccaagatggcggtggcgtccccttcgccgtcgctggtg
ggcactctggaggtggggcctgtggcgggggccaccttggcagtgggtccgcctctcttg
agcggcggccccgccgacgcctggcagggcctggaggagatggccaacaccctcatgagc
aacgcgcagcagctcaaagccttgatcgagcaggccaaaagggacaataaagggcacaag
gagtgtgctgtcagtcagtccttccagaaccagataacattccagacgccgccggacgac
acacaagccaaacggagcaccgacatcgctgaggtcatcctcaatcagatgtgcgagaac
tgcggccgcgtggccctcagcgagtgcacgggctgccggaaagtcaactactgctccact
ttctgccagaggaaggactggagagatcatcagaacagctgcttccaatcaggaggaggc
ggggccgccccggaggacgagccaatggcggcccttggcatggacaaagtgaagtga
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