Hippocampus comes (tiger tail seahorse): 109523047
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Entry
109523047 CDS
T04969
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109523047 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109523047 (vps8)
Membrane trafficking [BR:
hcq04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109523047 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Clathrin
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
TPR_VPS8_2
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-RING_Vps41
zf-RING_2
zf_RING_Vps8_fungal
Beta-prop_WDR5
Beta-prop_NWD2_C
Beta-prop_EML_2
zf-C3H2C3
EIF3I
PHD_4
WDR55
zf-C3HC4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
109523047
NCBI-ProteinID:
XP_019737442
LinkDB
All DBs
Position
Unknown
AA seq
1496 aa
AA seq
DB search
MSESLDACSLLSSSSQLDLMEEEVIDDKEFDIPQVDTPPTLESILNELEDEEEPFVLEDT
WVMNTENIDARSCDSASLASSDSGDPAHFKRKKKAVELKAAVHGSVLRHSMLQGISAQIV
SAADKVDAGLPTAITVAGVIVVGTSHGLALVFDNNQALRLCLGTKTTGAEFGAISALSIN
NDCSRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDDPTLAVCSDSGGSV
FELAFRRVMGMRSCDSRCLFSGSKGEVCCIEPLRACPDFSDHPITHYSLLALASLTKILV
IGLKPSLKVWMTFPYSKSDPSSVPQLAWQFVSVQMAVNPFLAFCKGDTVHFLMIKREEMG
AIHVIKQRHIHLSCDIISLNWINGRTLVLIDSHEKLQVVDRPSQEILEILDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSISSYAGQIVCLGTKSAHSMTLRTWRERIDCLL
KQEHFVEALSLAWSFHERTAKAVVGLCVDPFKRKGIVGDKMVEILFQFADHAMKRCPEQG
RIQVMEQHFHDVIPILIDFCLLLQRTDLLFDQLYARLVENVVAKGVFLEALESYIVMDRL
GHLPTPIMKDLLAHYHSNGLMDNLERCIVRLDVTSLDIQQVVQVCWANQLYDAMIYVFNS
GMNDYITPMEKLFAVIGPPLREGRSLTAKEVVMGNKLLVYISCCLAGRAYPLGDIPEDLV
VQVKIQVFEYLILLHAGESSSDAYPLIHTLLHFDTREFLNVLAMVSFPARIYLLDYFILF
VLRYTAIMVAQVYDYCTAGVLKPNQATLGERRDLLSSANKPSREEIESGDSKVGSRIAGV
EVSDVAKQLLSGGLARHLGQRSSPNKCFVDLEKAFDVSPWESFGGCFGSTSVTKPRKQVM
VDNPDFTPSQVGGLFTFLARQLSKPDNTLFVNRKLFDQVLEFLCRSDDASRHTERQQVLL
QLLQVGGVVQFDEEKLLTLSQRAKFYQILEFLYEKKHMYDKTIDCYLKDPLRKGEIFSYI
DHLMSMSSHGSEEKQAIKNKTLQHIQELIIFDTNRSADLVVCHFAEEVDQIVCLLPDGEL
HFKFLSSFMESWERHYPGTSPPLEHDLHTHLLDLMCRFAPQQLLSFLQTSQHYKLEEAIQ
ITEKYHHSEATGYLLEKKGDFYGAFTVLLEALKVQLSLLTADPTRGQNEEDKENESILLK
RVENSLNDLIALGHRNSQKLQQPQIKELWFSLLETLMTPQKQVLKDLTMNVLNSMSSLVS
LPAIIQQILQSPIYQKGQFAEIQVLILGMLDTFNYEQTLFETTTSLLNHDLHWSLAHLRT
AVTRGLHPRQDYCNICLQQYKRWQDPSEQILLFSCGHLYHVQCLQQQNTDCGLGGASEQQ
QQQWSCYKCSTVHRGRGRQYTIPTRSRSTSLAQTRLSSARHDEAGRKKVFEEVMLDFPQE
QSWNHLRCLYKGPSRLSVLTELSHCHSNERAGILIQAHPAQESFSLKLSPPPLLEE
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatctttggacgcttgcagtttactctcttcatcctcgcagctcgatctcatg
gaggaggaagtgattgacgataaggaattcgacattccccaagtagacacacctcccacc
ttggagagcatcctcaatgagctggaggatgaggaggaaccgtttgtgctggaagatact
tgggtgatgaataccgaaaatattgatgctcgttcctgtgatagcgcttcccttgccagc
tctgacagcggggacccagctcacttcaaacggaagaagaaggcagtggagttgaaagcg
gcagttcatggatcggttcttcgacacagcatgcttcagggcatctctgcgcagatcgtc
tcggctgcggacaaagttgatgctggattaccaactgcgattacagttgcaggggtgatt
gttgtgggaacgtctcacggtctggctttggtctttgataacaaccaagcgttaaggctc
tgtcttggaacaaaaacaactggtgcggagtttggtgcgatctctgccctcagcatcaac
aatgattgctcaagacttctctgtgggtttgcaaaaggacagattaccatgtgggatctt
gccaatgggaaacttcttaggacgatcactgatgcacaccctccgggcacagcaatcctg
cacgtaaagttcacagatgacccgacacttgcagtttgcagcgatagtggcggatcggtt
tttgagctggctttcaggagagtaatgggcatgcgttcctgtgactcaagatgcctattc
agtggttccaaaggggaagtctgctgtattgaaccactgcgtgcatgtccagacttcagt
gaccacccaataacacattattctctgttggctttggcttccctcacgaagattctggta
attggactgaagccctccctaaaagtttggatgacatttccctacagcaagtctgatcca
tccagtgtcccacagcttgcatggcagtttgtgtccgtccaaatggctgtcaacccattc
ttagctttctgtaaaggagatacagttcactttctcatgataaaaagagaggagatgggt
gccatccatgttatcaaacagagacatattcatctcagctgcgatataatcagtttgaat
tggattaatggtcgtacattagtcctgatagacagccacgaaaagctacaagttgtggac
cgacccagtcaggagattttggagattctggacttggagcaggtgcaactggtatacaac
agccgccatttcaaatcgctggccacaggagggaatgtctcccaggctttggctttagtt
ggagaaaaagcttgctaccagtctatttcaagctatgcaggacaaattgtctgtttgggc
accaagtcagcccattctatgactctcaggacctggagagagcgcattgactgtttgttg
aagcaggaacattttgttgaagctctctcattggcctggtcctttcatgaacgaacagct
aaggctgtggttggcttgtgtgtcgatcctttcaaaagaaagggaattgttggtgacaag
atggtggagatactgttccagtttgctgatcatgctatgaagaggtgcccagaacaaggc
agaatccaagtcatggagcagcattttcatgatgtgattccaatcttgatagatttctgc
ctgctgttgcaaaggaccgatctactattcgaccagctatatgctcggcttgtggagaat
gtggttgctaagggtgttttcctggaagcactcgagtcatacattgtcatggaccgcctt
ggtcacctccccacacccatcatgaaggatctcttggcccattaccacagcaatggtttg
atggacaatctggagagatgcattgttcgtctggacgtcacaagcctcgatatacagcag
gtagttcaagtttgttgggcaaaccagctatatgatgcgatgatctatgtgttcaacagt
ggcatgaatgactacatcacaccaatggagaaactttttgctgtaattggcccacctctt
cgggagggaagaagcttaacagctaaagaagtggtgatgggaaacaaactattggtgtac
atcagttgttgtcttgcaggaagggcatatcccctcggagacatccctgaggatcttgtg
gttcaggtcaagattcaggtatttgagtacttgattctgctccatgcaggggaatcatcg
tcagatgcttaccctcttattcatacactgctccactttgatactcgagaattcctaaat
gttcttgctatggtgagttttcctgcacgcatttatttacttgactattttatcttattt
gttcttcggtatacagcgatcatggttgctcaggtgtatgattattgcactgcgggtgtg
ctgaagcctaaccaggcgactttgggcgagaggcgagacctcctcagttccgccaacaaa
ccctcccgtgaggaaatagagtctggggactccaaggtgggctctcgtatcgctggggtt
gaagtcagtgacgtggctaaacagctcctcagtggtggcctagcccgacatcttgggcag
agaagctcgcccaacaagtgttttgtggacttggagaaggcgtttgacgtgtctccctgg
gaatcttttggtgggtgcttcgggagtacaagtgtgaccaaacccagaaagcaggtgatg
gtggacaacccggactttacaccatcccaggtgggcgggcttttcacgtttttggctcgg
cagctgtctaaaccagacaacacactttttgtaaacagaaaattatttgaccaggtcttg
gagttcctatgcagatcagatgatgcctctcgacacacggaacgacagcaggttctactg
cagctgctccaggtcggaggtgtggtccagtttgatgaagaaaagctgttgactttgtca
cagagagccaagttctaccaaattttggaatttctttatgagaagaaacatatgtatgac
aagaccattgactgctacctaaaagaccctctgagaaagggggagatcttcagctatatc
gaccacctgatgtctatgtcaagccacgggtctgaggagaagcaagcaatcaagaataaa
acactgcagcacatacaggaactgatcatctttgatacaaacaggtccgctgacctggtt
gtgtgtcactttgctgaagaagtggatcaaattgtttgccttcttccggatggcgagctg
catttcaagtttttgagctcattcatggagtcatgggaacgccattatccggggacttcc
cctccattggaacatgatctgcacacgcatctactggacctgatgtgccgttttgccccc
caacagctcttgagtttcctccaaacctcacagcactataagttggaggaggccatacaa
atcactgagaagtaccaccacagtgaagctacaggttatttgctcgagaagaaaggagac
ttttatggagcatttacagttttgttggaggcattaaaagtgcagctttctctactgact
gctgaccccaccagagggcagaacgaagaggacaaagaaaatgagtcgattctattgaag
agagtagaaaattcactgaacgacctcatcgccttgggtcatcgcaactctcagaaactc
cagcagccacaaatcaaggagctctggttttcattattggagacattgatgactccccag
aaacaggtcttaaaggatctgacaatgaacgttctcaacagtatgagcagcttggtttca
ctgcctgctatcatacagcagatactgcagagtcccatttatcagaaaggacaatttgca
gagatccaagtccttattcttgggatgcttgacactttcaactacgaacagactttattt
gaaacgaccaccagtcttttaaatcatgacctccactggtccctggctcatctgcgcacc
gctgtgacaaggggactccacccgagacaagactactgtaacatttgcctacaacagtac
aagaggtggcaggacccatctgagcagatccttctatttagctgtggtcacctgtaccac
gttcagtgcctgcagcaacaaaatacggactgtgggttgggaggtgcttcagagcagcag
cagcagcagtggagttgctacaagtgttccaccgttcacagaggaagaggccgtcagtat
accataccgacgagaagtcgcagcacatcccttgcacagactcgactttcatctgctcgt
catgacgaagctggtcgaaagaaggtttttgaagaggtaatgctggactttccacaagaa
caatcctggaatcacctacgttgtttatacaaagggccatcaaggttgtccgtcctgacg
gagctctctcactgccacagcaacgagagagcagggattctcattcaagctcatccagca
caagagagtttcagtcttaaactatctcctccgcctctgttggaagaatag
DBGET
integrated database retrieval system
