Hippocampus comes (tiger tail seahorse): 109523842
Help
Entry
109523842 CDS
T04969
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hcq01001
]
109523842
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcq04121
]
109523842
Enzymes [BR:
hcq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109523842
Protein kinases [BR:
hcq01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
109523842
Ubiquitin system [BR:
hcq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109523842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-C3HC4
PHD-1st_NSD
DUF1351
DUF5054
ParB
DUF7217
PRANC
FemAB_like
RNase_J_C
DUF7615
Motif
Other DBs
NCBI-GeneID:
109523842
NCBI-ProteinID:
XP_019738823
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MDPSVKSAASDDIVIIVENEAESLPLGEERPKPQGAFGLMDTCPICKLSFHNREPKLLPC
LHSFCKRCLPAPFRGVEPRRDHSLHPLGQVENNKQLGTIRCPVCRQECWEMDMLDNFFVK
DSAEVPSSTMEKNSQVCMSCDDNTEATGYCLECVEFLCVTCIEAHQRVKFTRDHTIRQKK
EMSPEAVAVSSLKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNH
RQYLENMTQQLQEKRKAIEEVSNCISNGLHQVEENRKSVTNEIKKAICNLIMEINRKGKV
LANQLETLTKDHELGLKKQQDEVNSLRRQLDHVISFTKWATASHSGTALLYCKRLILFQI
HYLMGARCNPSIIPQSSVRFQCRSGFWATNVDLGSLVVERSSVQASMPNQGAGGARGEPA
SGGLSLSAQQRQSTLAQLQMQVDKISQQPHRQAAPNHWSWYQNSRLPGTHGPPGPPPPTR
PIQGGSSPSQVHSGLPQMGRRYGTAAHGNTRSPNSSLLQNAGFPSPQGMFRYPHPVSAGG
ASQVPPIQRNLAELSYLKRSEAGGAVPSLSIALARSLATTNADKLAQGRHNSPTVKPSSS
DRSGGPPASWKPSSEPSSAPAAKRRRRSSPGPVIVIKDEPEDEDEVRFVQSNLPDSSTGA
CPALQLKIGPPFSTRQMDSAQATKPRPQPGAQPQSEKSAAAEDDPNEDWCAVCQNGGELL
CCDKCPKVFHLSCHIPLLNESPSGEWFCSFCRDLVSPEMQYECDKQDTQAPERLPPVDQR
ACERLLLLLFCNDFSAHFQHASESKKYKEVVTNPVDLSLVKRKLEGKASNGKRYLTPEEF
VADVRLIFMNCAKYYKATTEVGSAGLYLEDYFEEQLRQVYPDKMFPGEREEGMIPPLEDE
IDDDDDQQQKGPEGQAPSRESAAPPQDDKAAGPAENPAPPAEDNAPPPGEAAGDERTTKE
QATDMSEASTDAKAATEDGGELPPEDKVKQEDEAAPPAEVKTSEAEDQATVGSPKEDRTP
PANEQTSDVTKSQESTEEMAPNEETQDKAAGETDCASEEAEKNDG
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagtgtcaaatctgctgccagcgacgacattgtcatcatcgtggagaacgag
gcagagagtttgccccttggggaagagaggccgaagccacaaggcgctttcgggctcatg
gacacatgccccatctgtaagttgagctttcataaccgagagcccaaactgctcccttgc
cttcactcgttctgcaagcgatgcctgccagcaccgttcaggggagtcgaacccaggagg
gaccactccctccaccccctcggccaagtggaaaacaacaagcaattggggaccatccgc
tgtccagtatgccgtcaggaatgctgggaaatggacatgttggacaacttctttgtcaag
gattcggccgaggtgccgagtagcaccatggagaaaaacagccaggtgtgtatgagctgc
gacgacaacacggaggcaacgggctactgtttggagtgcgtggagttcttgtgtgtgacc
tgtatcgaggcgcaccagagggtcaagttcaccagggatcacacgatacggcagaagaaa
gaaatgtctccagaagcggtggctgtttcctccctgaagcccgtgttttgtgacatccac
aagcaggagccgctgaagcttttttgcgagacgtgcgatcgtctcacctgtcgcgactgc
cagctgctaaaacacaaggatcacaactatcagtttttggaggatgcgtacaggaaccac
agacagtatttggagaacatgacgcagcagctgcaagaaaaaaggaaggccattgaggag
gtctccaactgcatcagcaatggactgcatcaggttgaagaaaaccgaaagtctgtcacc
aacgaaataaagaaagccatttgcaacctgattatggagatcaaccggaagggaaaagtc
cttgccaaccagctggagactctgacgaaagatcacgagctgggcctgaaaaagcagcag
gatgaagtcaactcgctgcgccggcaactcgaccacgtgatcagcttcaccaagtgggcc
acggcgagccacagtggcaccgcactcctctactgcaagagactgattctgttccagatc
cactacctaatgggcgccagatgcaatccctccatcatccctcagagttctgtccgcttc
cagtgtcgctccggcttctgggccaccaacgtcgaccttggttctctggtggttgaaaga
agctctgtacaggcgtccatgcccaaccaaggagcaggaggtgccagaggagagccggcg
agcggggggctctcgttatccgctcagcaacgccagagtacgctggcccagctgcaaatg
caggttgacaaaatttcccagcagccccacaggcaggccgcacccaaccattggtcctgg
taccagaatagccggctccccgggacccacggaccccccggtcccccgcctccgacgcga
cccatccagggaggctcctccccatcgcaggtccacagcggcttgccgcagatgggacgc
cgatacgggaccgccgcccatggcaacaccaggagtcccaactcctcgctgctgcagaac
gccgggttcccatctcctcagggcatgtttcgctacccgcatcctgtgtccgctggaggg
gcctcgcaagtaccgcccatccagcggaacctggcagagctctcctacctgaagaggagt
gaagccggcggcgcggtcccgtcccttagcatcgctcttgcgagaagcctagcgacaaca
aatgctgacaaactggctcaaggaaggcacaactcgcccacggtcaaaccgtcatcctca
gatcgaagcggagggccgccggcgtcctggaagccgagtagcgagccgtcgtccgctccc
gcggccaagcgacggagaaggtcgtcccccgggcccgtcatcgtcatcaaggacgaaccg
gaggatgaggatgaagttcgttttgtgcagtccaaccttcctgacagcagcacgggggcc
tgccccgcgctgcagctcaagatcggcccgcctttctccacccgccaaatggactcggcg
caggcgaccaagccccgccctcagcccggcgcgcagccgcagtccgagaagagcgctgcg
gcggaggacgaccccaacgaggactggtgcgccgtgtgccagaatggaggcgagctgctg
tgctgcgacaagtgtcccaaagttttccacctgtcctgccacatccccttgctcaatgag
tcgcccagtggcgagtggttctgctccttctgccgagacctggtctcacccgagatgcag
tacgaatgcgacaagcaggacacgcaggcgccggaaagactgccacctgttgaccaaagg
gcatgcgagcggctgctcctcctcctcttctgtaacgacttcagcgcccatttccagcac
gcctccgagtccaaaaaatacaaagaggtggtcacaaacccggtggatttatccctcgta
aagaggaagctggaggggaaggcgagcaacggcaaacgttaccttactcccgaggagttt
gtcgcagacgtgaggctcatattcatgaactgtgccaagtactacaaggcgaccacagag
gtgggcagcgccggcttgtacttagaggactactttgaggagcagctgaggcaggtctac
cccgacaagatgttccccggcgaaagggaagaaggcatgatcccgccactggaggacgag
atcgacgacgacgacgaccagcagcagaaagggccggaggggcaggcgccgtcgcgggaa
agcgccgcccccccgcaggacgacaaagcggccggtcccgcggagaacccggccccaccc
gcggaggacaacgcgcccccaccgggggaagccgccggagacgagcgaacaacgaaggag
caggcgaccgacatgagcgaggcatcaaccgacgcaaaggcggcgacggaagacggagga
gagcttccgcccgaggacaaagtcaagcaggaggacgaagcggctcctcccgctgaggtg
aaaacatccgaagctgaggaccaggccacggtcggctccccgaaagaggatcggacccca
ccggctaacgaacagacttctgacgttacgaaaagccaggagagcacagaggaaatggcc
cccaacgaagaaacgcaggacaaagcagcaggtgagacggattgcgccagtgaggaagcg
gagaaaaacgacggctga
DBGET
integrated database retrieval system
