Hippocampus comes (tiger tail seahorse): 109523864
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Entry
109523864 CDS
T04969
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03440
Homologous recombination
hcq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109523864 (brip1)
03460 Fanconi anemia pathway
109523864 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcq03400
]
109523864 (brip1)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109523864 (brip1)
DNA repair and recombination proteins [BR:
hcq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
109523864 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
109523864 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-GeneID:
109523864
NCBI-ProteinID:
XP_019738855
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MTASCVEYTIGGVRIQFPCKAYPSQLAMMNSILRGLNYGQHCLLESPTGSGKSLALLCSA
LGWQQAQFDKLQAEGSSQDESQSFKNTSDVTKSNMTIPCRCLCHSKGKSASTATSINAAV
VDLKDQLHPSNDTTKSFPEKSSPSELGETIQFSPIDDQDKTDFQPERKRIRIAEPKGVVF
SEDMPKLENHSSCPQSSSMDPKSHGPRVLSPCLSPESCFHCPCASAKDSAKDKGGKRKVP
KIFFGTRTHKQITQVVHEMKRTAYSTAPMTILSSRDHTCVNPNVAPHSNRNDLCKDLMEA
KDGRSCPYFHAVQKMGNQNTLQLVHGVHQAWDIEDLVSLGKRLRSCSYYAARELMQGSRI
IFCPYNYLLDPVIRDCMEIDLAGHILVLDEAHNIEDCARESASFMLDHNNLLMCRDDFDG
MVNSNIRRLKHEPLRDFCCSILNWIQESQSLMSDRGYEDACKVWNGKEILSIFHNLGITP
DTFRMLKQNLAAVLEKEETVGFVNGKDDMMLVPTISSSTSSILKGLFMVLDFLFRDNCRY
SEDYRVVLQKTYSWTTKAKPYMSDAQGSMVQRGRQHQKVKVKTESLSLSFWCLNPAVAFS
DLSGTAHSIVLTSGTLSPMGSFSSELGVKFSGQLEASHVINKSQVWVGTVGVGPQGRKLC
ATFQHAETYAFQDEVGDLLLHVCKVMPKGVLCFLPSYKMLGKMQDRWSITGVWEKLEKQK
KVITEPRGGGKGDFDELLQAYYNAIKSSEKIDGALLLAVCRGKVSEGLDFTDDNARAVVT
IGIPFPNIKNLQVELKMKYNDQHSKSRGLLPGHHWYEMQAYRALNQALGRCIRHRKDWGA
LILVDDRFRNNPNKYIKGLSKWVRQLVQHHDTFTSAMESLAAFSQAQEKCCLFTDSQNSI
ISFSSSASGTKALPGSPKPVETQMNTERHELQEWQRMTHIPPSAPLLHTPADSPNLILSS
EKQQILSLQKKTENSVLESSAAVRLTSRAPQSNTDRELTPTDNQDENKDGKTALLTLGIF
KVEAEEANACVEIDSPSRISFEAEHQDLHSQDLFGSEVAQDSPFDEESMISVDTENIEDR
GETKVAGEHVRNKIRLSRSRQRAHLSPMKK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatcctgcgtggagtacactattggaggtgtgcggatccagttcccctgcaag
gcgtatccatcccagctggccatgatgaattcaatcctacgagggttgaattatgggcag
cattgtttgctggaaagtcctactggaagtggcaagagtttagccttgctgtgttcagcg
ctgggatggcagcaggcacagtttgataaattgcaagccgaaggaagctctcaagatgaa
agccaatcttttaaaaacacgagcgatgtcacaaagtcaaacatgaccatcccatgccga
tgtctgtgccatagcaaagggaaatcggcctcaaccgccacttccatcaacgctgctgtt
gttgacctgaaagatcagctgcatcccagcaatgacacaaccaaatcctttcctgaaaaa
agttcaccctctgaactgggtgagacaatccaattttcccccatcgatgaccaagataaa
acagatttccagcctgagaggaaacgtattcgcattgctgaacctaagggagttgtattt
tcagaagatatgccgaagctggaaaatcattcttcatgtcctcagagttcatctatggac
cccaaaagccatggacctcgagtgttgtccccttgcctttcccccgaatcatgcttccac
tgcccatgtgcatcagccaaggatagtgcaaaggataaaggtggcaaaaggaaggtcccc
aaaattttttttggcacacgcacacataaacaaataactcaagttgttcacgagatgaag
cgtactgcatactccactgctccaatgaccatattatccagcagagatcatacctgtgtc
aacccaaatgtggcccctcactccaaccggaatgacctctgcaaggacctaatggaagcc
aaagatggaagatcatgtccttacttccatgcagtacagaaaatgggcaaccagaacact
ctgcagttggtccatggagttcaccaagcctgggacattgaggacctggtctctttgggc
aaacggcttcgttcatgttcatactatgctgctcgtgaactcatgcaaggctccaggatc
atcttctgtccgtataactacctgttagatccagtgatcagagattgtatggagattgat
cttgcaggccacatcttggttctggatgaagcccataatattgaggactgtgctcgagaa
agtgccagcttcatgttagaccacaataatttgctgatgtgcagggatgactttgacggc
atggtcaacagcaacatccggcggttgaaacatgagcctctaagagatttttgctgtagt
atactcaactggatccaggagagccaaagcctcatgtctgataggggatatgaagatgca
tgtaaagtttggaatggaaaggaaatactgagcatttttcacaacctgggtatcactcct
gataccttccggatgctgaagcagaatctggctgcagtgctggaaaaggaagagactgtg
ggattcgtaaatgggaaagatgacatgatgctggtcccaaccataagctcatcaacatcc
agcatcctcaaaggactcttcatggttcttgacttcctcttcagagacaactgcagatat
tctgaagactacagagttgtacttcaaaagacatattcttggacaaccaaagccaagcct
tacatgagtgatgcgcaggggtctatggtccaacgaggcagacaacatcaaaaagtcaaa
gtgaagactgaatctctctcactgagtttctggtgcctcaatcctgctgtggcattttct
gatttaagtgggacagcgcacagcattgttctgacatcagggacgctatcaccaatggga
tccttctcctcggaacttggagtgaaattctctggtcaactggaggccagccatgtcatc
aacaaatctcaggtttgggttggcactgttggtgttggacctcaaggcagaaagctctgt
gccacctttcaacatgctgaaacgtatgccttccaggatgaagttggtgacctgctactg
catgtttgcaaagttatgcccaagggtgtgctttgcttcctgccatcctacaagatgctg
ggtaaaatgcaggatcgatggagcatcacaggcgtttgggagaaacttgaaaaacaaaaa
aaagtgataacagagcctcgtggtggtggaaaaggtgactttgatgaacttcttcaggct
tactacaatgcgattaagtcctctgagaaaatcgatggtgcactcctgctggctgtatgt
cggggaaaagtgagtgaaggactggacttcacagatgacaatgcaagagcagtggtcacg
attggaatcccattcccaaatattaaaaacctccaggtcgaactcaagatgaagtacaat
gatcagcactcaaagagtagaggtcttctccctggccatcactggtatgagatgcaggct
taccgagctctaaaccaggccctgggaaggtgtattcgtcacagaaaagactggggtgcc
ctaatcttagtggatgaccgtttcaggaataatccaaacaagtatatcaaaggtctgtcc
aagtgggtacgccaactagtccagcatcatgacaccttcaccagtgccatggagtccctt
gctgcattctctcaggcacaagagaagtgttgccttttcacagacagccagaactcaatc
atctctttctcaagcagcgcatctggaaccaaggcattaccaggttcacccaaaccagtg
gaaacacaaatgaatactgaacgacatgaattacaagaatggcagaggatgacacacatt
ccaccttcagcgccacttttacacactccagctgacagtccgaacctcattttaagctct
gagaaacaacaaattctttctctccaaaagaagacggagaattctgtacttgaatcatca
gctgcagttagattgacatcacgagcaccccagtcaaacacggatcgtgaattgactcca
acagacaatcaagatgaaaacaaagatggcaagactgcccttttaacccttggaattttt
aaagtggaagcagaggaagccaatgcctgtgttgagatcgattcaccatcccggataagt
tttgaagcagagcatcaagacctacactcacaggatctttttggatctgaggtcgcccaa
gattctccctttgatgaagagagcatgatttcagttgacacagaaaacatagaggacaga
ggggagacaaaagttgcaggagaacatgtgagaaacaagatcaggctgtcaagatccaga
cagagagctcacctttctccaatgaagaaataa
DBGET
integrated database retrieval system
